Date: Sun, 29 Aug 2021 20:14:17 GMT From: pkg-fallout@FreeBSD.org To: wen@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - main-amd64-default][math/R-cran-Zelig] Failed for R-cran-Zelig-5.1.7 in stage/runaway Message-ID: <202108292014.17TKEHXR054701@beefy18.nyi.freebsd.org>
next in thread | raw e-mail | index | archive | help
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: wen@FreeBSD.org Log URL: http://beefy18.nyi.freebsd.org/data/main-amd64-default/p8cf43fc967a5_s17fc43bc01/logs/R-cran-Zelig-5.1.7.log Build URL: http://beefy18.nyi.freebsd.org/build.html?mastername=main-amd64-default&build=p8cf43fc967a5_s17fc43bc01 Log: =>> Building math/R-cran-Zelig build started at Sun Aug 29 18:01:30 UTC 2021 port directory: /usr/ports/math/R-cran-Zelig package name: R-cran-Zelig-5.1.7 building for: FreeBSD main-amd64-default-job-06 14.0-CURRENT FreeBSD 14.0-CURRENT 1400032 amd64 maintained by: wen@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400008 Jail OSVERSION: 1400032 Job Id: 06 !!! Jail is newer than host. (Jail: 1400032, Host: 1400008) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh OSVERSION=1400032 UNAME_v=FreeBSD 14.0-CURRENT 1400032 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- wen@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-Zelig/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-Zelig/work HOME=/wrkdirs/usr/ports/math/R-cran-Zelig/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/R-cran-Zelig/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-Zelig/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-Zelig/work HOME=/wrkdirs/usr/ports/math/R-cran-Zelig/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/R-cran-Zelig/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/Zelig OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/Zelig" EXAMPLESDIR="share/examples/Zelig" DATADIR="share/Zelig" WWWDIR="www/Zelig" ETCDIR="etc/Zelig" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/Zelig DOCSDIR=/usr/local/share/doc/Zelig EXAMPLESDIR=/usr/local/share/examples/Zelig WWWDIR=/usr/local/www/Zelig ETCDIR=/usr/local/etc/Zelig --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 12.0.1 (git@github.com:llvm/llvm-project.git llvmorg-12.0.1-0-gfed41342a82f) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 12.0.1 (git@github.com:llvm/llvm-project.git llvmorg-12.0.1-0-gfed41342a82f) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 12.0.1 (git@github.com:llvm/llvm-project.git llvmorg-12.0.1-0-gfed41342a82f) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400032 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv3+ accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> R-cran-Zelig-5.1.7 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.17.1.pkg [main-amd64-default-job-06] Installing pkg-1.17.1... [main-amd64-default-job-06] Extracting pkg-1.17.1: .......... done ===> R-cran-Zelig-5.1.7 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-Zelig-5.1.7 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3+ accepted by the user ===> Fetching all distfiles required by R-cran-Zelig-5.1.7 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3+ accepted by the user ===> Fetching all distfiles required by R-cran-Zelig-5.1.7 for building => SHA256 Checksum OK for Zelig_5.1.7.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3+ accepted by the user ===> Fetching all distfiles required by R-cran-Zelig-5.1.7 for building ===> Extracting for R-cran-Zelig-5.1.7 => SHA256 Checksum OK for Zelig_5.1.7.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for R-cran-Zelig-5.1.7 =========================================================================== =======================<phase: build-depends >============================ ===> R-cran-Zelig-5.1.7 depends on package: R-cran-AER>=0 - not found ===> Installing existing package /packages/All/R-cran-AER-1.2.9_1.pkg [main-amd64-default-job-06] Installing R-cran-AER-1.2.9_1... [main-amd64-default-job-06] `-- Installing R-4.1.1_1... [main-amd64-default-job-06] | `-- Installing cairo-1.17.4,3... [main-amd64-default-job-06] | | `-- Installing fontconfig-2.13.94,1... [main-amd64-default-job-06] | | `-- Installing expat-2.4.1... [main-amd64-default-job-06] | | `-- Extracting expat-2.4.1: .......... done [main-amd64-default-job-06] | | `-- Installing freetype2-2.10.4... <snip> https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from R-cran-crayon-1.4.1: -- ===> NOTICE: The R-cran-crayon port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from R-cran-rematch-1.0.1_3: -- ===> NOTICE: The R-cran-rematch port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from R-cran-cellranger-1.1.0_3: -- ===> NOTICE: The R-cran-cellranger port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from R-cran-readxl-1.3.1_2: -- ===> NOTICE: The R-cran-readxl port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from R-cran-rio-0.5.16_3: -- ===> NOTICE: The R-cran-rio port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> R-cran-Zelig-5.1.7 depends on package: R-cran-AER>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-Amelia>=0 - not found ===> Installing existing package /packages/All/R-cran-Amelia-1.8.0.pkg [main-amd64-default-job-06] Installing R-cran-Amelia-1.8.0... [main-amd64-default-job-06] Extracting R-cran-Amelia-1.8.0: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-Amelia>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-sandwich>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-VGAM>=0 - not found ===> Installing existing package /packages/All/R-cran-VGAM-1.1.5.pkg [main-amd64-default-job-06] Installing R-cran-VGAM-1.1.5... [main-amd64-default-job-06] Extracting R-cran-VGAM-1.1.5: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-VGAM>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-plyr>=0 - not found ===> Installing existing package /packages/All/R-cran-plyr-1.8.6_1.pkg [main-amd64-default-job-06] Installing R-cran-plyr-1.8.6_1... [main-amd64-default-job-06] Extracting R-cran-plyr-1.8.6_1: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-plyr>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-quantreg>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-MCMCpack>=0 - not found ===> Installing existing package /packages/All/R-cran-MCMCpack-1.5.0.pkg [main-amd64-default-job-06] Installing R-cran-MCMCpack-1.5.0... [main-amd64-default-job-06] `-- Installing R-cran-coda-0.19.4... [main-amd64-default-job-06] `-- Extracting R-cran-coda-0.19.4: .......... done [main-amd64-default-job-06] `-- Installing R-cran-mcmc-0.9.7_1... [main-amd64-default-job-06] `-- Extracting R-cran-mcmc-0.9.7_1: .......... done [main-amd64-default-job-06] Extracting R-cran-MCMCpack-1.5.0: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-MCMCpack>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-maxLik>=0 - not found ===> Installing existing package /packages/All/R-cran-maxLik-1.4.8.pkg [main-amd64-default-job-06] Installing R-cran-maxLik-1.4.8... [main-amd64-default-job-06] `-- Installing R-cran-miscTools-0.6.26_1... [main-amd64-default-job-06] | `-- Installing R-cran-digest-0.6.27... [main-amd64-default-job-06] | `-- Extracting R-cran-digest-0.6.27: .......... done [main-amd64-default-job-06] `-- Extracting R-cran-miscTools-0.6.26_1: .......... done [main-amd64-default-job-06] Extracting R-cran-maxLik-1.4.8: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-maxLik>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-jsonlite>=0 - not found ===> Installing existing package /packages/All/R-cran-jsonlite-1.7.2.pkg [main-amd64-default-job-06] Installing R-cran-jsonlite-1.7.2... [main-amd64-default-job-06] Extracting R-cran-jsonlite-1.7.2: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-jsonlite>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-dplyr>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-MatchIt>=0 - not found ===> Installing existing package /packages/All/R-cran-MatchIt-4.2.0.pkg [main-amd64-default-job-06] Installing R-cran-MatchIt-4.2.0... [main-amd64-default-job-06] `-- Installing R-cran-Matching-4.9.9... [main-amd64-default-job-06] `-- Extracting R-cran-Matching-4.9.9: .......... done [main-amd64-default-job-06] `-- Installing R-cran-RcppProgress-0.4.2_1... [main-amd64-default-job-06] `-- Extracting R-cran-RcppProgress-0.4.2_1: .......... done [main-amd64-default-job-06] `-- Installing R-cran-rgenoud-5.8.3.0_2... [main-amd64-default-job-06] `-- Extracting R-cran-rgenoud-5.8.3.0_2: .......... done [main-amd64-default-job-06] Extracting R-cran-MatchIt-4.2.0: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-MatchIt>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-geepack>=0 - not found ===> Installing existing package /packages/All/R-cran-geepack-1.3.2.pkg [main-amd64-default-job-06] Installing R-cran-geepack-1.3.2... [main-amd64-default-job-06] Extracting R-cran-geepack-1.3.2: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-geepack>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on package: R-cran-survey>=0 - not found ===> Installing existing package /packages/All/R-cran-survey-4.0_1.pkg [main-amd64-default-job-06] Installing R-cran-survey-4.0_1... [main-amd64-default-job-06] `-- Installing R-cran-mitools-2.4_2... [main-amd64-default-job-06] | `-- Installing R-cran-DBI-1.1.1... [main-amd64-default-job-06] | `-- Extracting R-cran-DBI-1.1.1: .......... done [main-amd64-default-job-06] `-- Extracting R-cran-mitools-2.4_2: .......... done [main-amd64-default-job-06] Extracting R-cran-survey-4.0_1: .......... done ===> R-cran-Zelig-5.1.7 depends on package: R-cran-survey>=0 - found ===> Returning to build of R-cran-Zelig-5.1.7 ===> R-cran-Zelig-5.1.7 depends on file: /usr/local/bin/R - found =========================================================================== =======================<phase: lib-depends >============================ =========================================================================== =======================<phase: configure >============================ ===> Configuring for R-cran-Zelig-5.1.7 =========================================================================== =======================<phase: build >============================ =========================================================================== =======================<phase: run-depends >============================ ===> R-cran-Zelig-5.1.7 depends on package: R-cran-AER>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-Amelia>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-sandwich>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-VGAM>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-plyr>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-quantreg>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-MCMCpack>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-maxLik>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-jsonlite>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-dplyr>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-MatchIt>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-geepack>=0 - found ===> R-cran-Zelig-5.1.7 depends on package: R-cran-survey>=0 - found ===> R-cran-Zelig-5.1.7 depends on file: /usr/local/bin/R - found =========================================================================== =======================<phase: stage >============================ ===> Staging for R-cran-Zelig-5.1.7 ===> Generating temporary packing list * installing *source* package 'Zelig' ... ** package 'Zelig' successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location =>> Killing runaway build after 7200 seconds with no output
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202108292014.17TKEHXR054701>