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Date:      Wed, 13 Feb 2019 15:53:05 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - head-armv6-default][math/py-gau2grid] Failed for py27-gau2grid-1.3.1 in build
Message-ID:  <201902131553.x1DFr5M1054695@beefy8.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: yuri@FreeBSD.org
Ident:          $FreeBSD: head/math/py-gau2grid/Makefile 491311 2019-01-26 20:29:29Z yuri $
Log URL:        http://beefy8.nyi.freebsd.org/data/head-armv6-default/p492744_s344025/logs/py27-gau2grid-1.3.1.log
Build URL:      http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p492744_s344025
Log:

=>> Building math/py-gau2grid
build started at Wed Feb 13 15:52:14 UTC 2019
port directory: /usr/ports/math/py-gau2grid
package name: py27-gau2grid-1.3.1
building for: FreeBSD head-armv6-default-job-19 13.0-CURRENT FreeBSD 13.0-CURRENT 1300010 arm
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: head/math/py-gau2grid/Makefile 491311 2019-01-26 20:29:29Z yuri $
Poudriere version: 3.2.8
Host OSVERSION: 1300009
Jail OSVERSION: 1300010
Job Id: 19




!!! Jail is newer than host. (Jail: 1300010, Host: 1300009) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py27-gau2grid-1.3.1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.5_5.txz
[head-armv6-default-job-19] Installing pkg-1.10.5_5...
[head-armv6-default-job-19] Extracting pkg-1.10.5_5: .......... done
===>   py27-gau2grid-1.3.1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py27-gau2grid-1.3.1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
<snip>
as they require additional dependencies. They are available as:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

===========================================================================
Message from metis-5.1.0_7:

===>   NOTICE:

The metis port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===>   py27-gau2grid-1.3.1 depends on package: py27-numpy>0 - found
===>   Returning to build of py27-gau2grid-1.3.1
===>   py27-gau2grid-1.3.1 depends on executable: cmake - not found
===>   Installing existing package /packages/All/cmake-3.13.4.txz
[head-armv6-default-job-19] Installing cmake-3.13.4...
[head-armv6-default-job-19] `-- Installing curl-7.64.0_1...
[head-armv6-default-job-19] |   `-- Installing ca_root_nss-3.42.1...
[head-armv6-default-job-19] |   `-- Extracting ca_root_nss-3.42.1: ........ done
[head-armv6-default-job-19] |   `-- Installing libnghttp2-1.36.0...
[head-armv6-default-job-19] |   `-- Extracting libnghttp2-1.36.0: .......... done
[head-armv6-default-job-19] `-- Extracting curl-7.64.0_1: .......... done
[head-armv6-default-job-19] `-- Installing expat-2.2.6_1...
[head-armv6-default-job-19] `-- Extracting expat-2.2.6_1: .......... done
[head-armv6-default-job-19] `-- Installing jsoncpp-1.8.1_5...
[head-armv6-default-job-19] `-- Extracting jsoncpp-1.8.1_5: .......... done
[head-armv6-default-job-19] `-- Installing libarchive-3.3.3,1...
[head-armv6-default-job-19] |   `-- Installing liblz4-1.8.3,1...
[head-armv6-default-job-19] |   `-- Extracting liblz4-1.8.3,1: .......... done
[head-armv6-default-job-19] |   `-- Installing lzo2-2.10_1...
[head-armv6-default-job-19] |   `-- Extracting lzo2-2.10_1: .......... done
[head-armv6-default-job-19] `-- Extracting libarchive-3.3.3,1: .......... done
[head-armv6-default-job-19] `-- Installing libuv-1.26.0...
[head-armv6-default-job-19] `-- Extracting libuv-1.26.0: .......... done
[head-armv6-default-job-19] `-- Installing rhash-1.3.5...
[head-armv6-default-job-19] `-- Extracting rhash-1.3.5: .......... done
[head-armv6-default-job-19] Extracting cmake-3.13.4: .......... done
Message from ca_root_nss-3.42.1:

********************************* WARNING *********************************

FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.

Assessment and verification of trust is the complete responsibility of the
system administrator.

*********************************** NOTE **********************************

This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.

This enables SSL Certificate Verification by client software without manual
intervention.

If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.

  * /etc/ssl/cert.pem
  * /usr/local/etc/ssl/cert.pem
  * /usr/local/openssl/cert.pem

***************************************************************************
===>   py27-gau2grid-1.3.1 depends on executable: cmake - found
===>   Returning to build of py27-gau2grid-1.3.1
===>   py27-gau2grid-1.3.1 depends on file: /usr/local/bin/cmake - found
===>   py27-gau2grid-1.3.1 depends on executable: ninja - not found
===>   Installing existing package /packages/All/ninja-1.8.2_1,2.txz
[head-armv6-default-job-19] Installing ninja-1.8.2_1,2...
[head-armv6-default-job-19] Extracting ninja-1.8.2_1,2: ......... done
===>   py27-gau2grid-1.3.1 depends on executable: ninja - found
===>   Returning to build of py27-gau2grid-1.3.1
===>   py27-gau2grid-1.3.1 depends on file: /usr/local/bin/python2.7 - found
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py27-gau2grid-1.3.1
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/math/py-gau2grid/work-py27/.build
-- The C compiler identification is Clang 7.0.1
-- Check for working C compiler: /nxb-bin/usr/bin/cc
-- Check for working C compiler: /nxb-bin/usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Setting (unspecified) option MAX_AM: 8
-- Setting (unspecified) option SPHERICAL_ORDER: gaussian
-- Setting (unspecified) option CARTESIAN_ORDER: row
-- Setting option MAX_AM: 8
-- Setting option CMAKE_BUILD_TYPE: Release
-- Setting (unspecified) option ENABLE_XHOST: ON
-- Performing Test CMAKE_C_FLAGS [-xHost] - Failed
-- Performing Test CMAKE_C_FLAGS [-march=native] - Failed
CMake Warning at cmake/psi4OptionsTools.cmake:94 (message):
  Option unfulfilled as none of -xHost;-march=native valid
Call Stack (most recent call first):
  cmake/psi4OptionsTools.cmake:137 (add_C_or_CXX_flags)
  cmake/psi4OptionsTools.cmake:168 (add_C_flags)
  cmake/psi4OptionsTools.cmake:186 (add_flags)
  CMakeLists.txt:22 (option_with_flags)


-- Setting (unspecified) option BUILD_FPIC: ON
-- Setting (unspecified) option BUILD_SHARED_LIBS: ON
-- Setting (unspecified) option ENABLE_GENERIC: OFF
-- Setting (unspecified) option CMAKE_INSTALL_LIBDIR: lib
-- Setting option PYMOD_INSTALL_LIBDIR: /usr/local/lib/python2.7/site-packages
-- Setting option INSTALL_PYMOD: ON
-- Setting (unspecified) option NATIVE_PYTHON_INSTALL: OFF
-- gau2grid install: /usr/local
-- Found PythonInterp: /usr/local/bin/python2.7 (found suitable version "2.7.15", minimum required is "2.7") 
-- Found PythonLibs: /usr/local/lib/libpython2.7.so
-- Found Python 2.7: /usr/local/bin/python2.7 (found version 2.7.15)
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/usr/local/lib/python2.7/site-packages/numpy/__init__.py", line 142, in <module>
    from . import add_newdocs
  File "/usr/local/lib/python2.7/site-packages/numpy/add_newdocs.py", line 13, in <module>
    from numpy.lib import add_newdoc
  File "/usr/local/lib/python2.7/site-packages/numpy/lib/__init__.py", line 8, in <module>
    from .type_check import *
  File "/usr/local/lib/python2.7/site-packages/numpy/lib/type_check.py", line 11, in <module>
    import numpy.core.numeric as _nx
  File "/usr/local/lib/python2.7/site-packages/numpy/core/__init__.py", line 26, in <module>
    raise ImportError(msg)
ImportError: 
Importing the multiarray numpy extension module failed.  Most
likely you are trying to import a failed build of numpy.
If you're working with a numpy git repo, try `git clean -xdf` (removes all
files not under version control).  Otherwise reinstall numpy.

Original error was: /usr/local/lib/libblas.so.2: Undefined symbol "__aeabi_uidiv@GCC_3.5"

-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    BOOST_PYTHON_SUFFIX
    CMAKE_COLOR_MAKEFILE
    CMAKE_CXX_COMPILER
    CMAKE_CXX_FLAGS
    CMAKE_CXX_FLAGS_DEBUG
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_DEBUG
    CMAKE_EXE_LINKER_FLAGS
    CMAKE_MODULE_LINKER_FLAGS
    CMAKE_VERBOSE_MAKEFILE
    THREADS_HAVE_PTHREAD_ARG


-- Build files have been written to: /wrkdirs/usr/ports/math/py-gau2grid/work-py27/.build
===========================================================================
=======================<phase: build          >============================
===>  Building for py27-gau2grid-1.3.1
[1/9] cd /wrkdirs/usr/ports/math/py-gau2grid/work-py27/.build && /usr/local/bin/python2.7 -c "import sys;                                      sys.path.append('/wrkdirs/usr/ports/math/py-gau2grid/work-py27/gau2grid-1.3.1');                                      import gau2grid as gg;                                      gg.c_gen.generate_c_gau2grid(8, path='/wrkdirs/usr/ports/math/py-gau2grid/work-py27/.build', cartesian_order='row', spherical_order='gaussian')"
FAILED: gau2grid.h gau2grid_orbital.c gau2grid_phi.c gau2grid_deriv1.c gau2grid_deriv2.c gau2grid_spherical.c gau2grid_helper.c 
cd /wrkdirs/usr/ports/math/py-gau2grid/work-py27/.build && /usr/local/bin/python2.7 -c "import sys;                                      sys.path.append('/wrkdirs/usr/ports/math/py-gau2grid/work-py27/gau2grid-1.3.1');                                      import gau2grid as gg;                                      gg.c_gen.generate_c_gau2grid(8, path='/wrkdirs/usr/ports/math/py-gau2grid/work-py27/.build', cartesian_order='row', spherical_order='gaussian')"
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/wrkdirs/usr/ports/math/py-gau2grid/work-py27/gau2grid-1.3.1/gau2grid/__init__.py", line 5, in <module>
    from . import RSH
  File "/wrkdirs/usr/ports/math/py-gau2grid/work-py27/gau2grid-1.3.1/gau2grid/RSH.py", line 10, in <module>
    import numpy as np
  File "/usr/local/lib/python2.7/site-packages/numpy/__init__.py", line 142, in <module>
    from . import add_newdocs
  File "/usr/local/lib/python2.7/site-packages/numpy/add_newdocs.py", line 13, in <module>
    from numpy.lib import add_newdoc
  File "/usr/local/lib/python2.7/site-packages/numpy/lib/__init__.py", line 8, in <module>
    from .type_check import *
  File "/usr/local/lib/python2.7/site-packages/numpy/lib/type_check.py", line 11, in <module>
    import numpy.core.numeric as _nx
  File "/usr/local/lib/python2.7/site-packages/numpy/core/__init__.py", line 26, in <module>
    raise ImportError(msg)
ImportError: 
Importing the multiarray numpy extension module failed.  Most
likely you are trying to import a failed build of numpy.
If you're working with a numpy git repo, try `git clean -xdf` (removes all
files not under version control).  Otherwise reinstall numpy.

Original error was: /usr/local/lib/libblas.so.2: Undefined symbol "__aeabi_uidiv@GCC_3.5"

ninja: build stopped: subcommand failed.
*** Error code 1

Stop.
make: stopped in /usr/ports/math/py-gau2grid



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