Date: Fri, 11 Mar 2016 16:45:29 +0000 From: bugzilla-noreply@freebsd.org To: freebsd-ports-bugs@FreeBSD.org Subject: [Bug 207908] [NEW PORT] biology/bowtie2: Ultrafast, memory-efficient short read aligner Message-ID: <bug-207908-13@https.bugs.freebsd.org/bugzilla/>
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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D207908 Bug ID: 207908 Summary: [NEW PORT] biology/bowtie2: Ultrafast, memory-efficient short read aligner Product: Ports & Packages Version: Latest Hardware: amd64 OS: Any Status: New Severity: Affects Some People Priority: --- Component: Individual Port(s) Assignee: freebsd-ports-bugs@FreeBSD.org Reporter: bacon4000@gmail.com Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. This is Bowtie version 2, which will need to coexists with Bowtie 1 for the foreseeable future. Both are required by certain genomics pipelines, in so= me cases (e.g. Trinity) by the same pipeline. portlint: OK (looks fine.) testport: OK (poudriere: 9.3, 10.1 amd64 (does not run on 32-bit processors= )) --=20 You are receiving this mail because: You are the assignee for the bug.=
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