From owner-svn-ports-all@FreeBSD.ORG Tue Jul 22 22:12:15 2014 Return-Path: Delivered-To: svn-ports-all@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id EE74F38F; Tue, 22 Jul 2014 22:12:15 +0000 (UTC) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id DBA832CED; Tue, 22 Jul 2014 22:12:15 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.8/8.14.8) with ESMTP id s6MMCFUh035852; Tue, 22 Jul 2014 22:12:15 GMT (envelope-from amdmi3@svn.freebsd.org) Received: (from amdmi3@localhost) by svn.freebsd.org (8.14.8/8.14.8/Submit) id s6MMCFi1035850; Tue, 22 Jul 2014 22:12:15 GMT (envelope-from amdmi3@svn.freebsd.org) Message-Id: <201407222212.s6MMCFi1035850@svn.freebsd.org> From: Dmitry Marakasov Date: Tue, 22 Jul 2014 22:12:15 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r362596 - head/biology/plinkseq X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 22 Jul 2014 22:12:16 -0000 Author: amdmi3 Date: Tue Jul 22 22:12:15 2014 New Revision: 362596 URL: http://svnweb.freebsd.org/changeset/ports/362596 QAT: https://qat.redports.org/buildarchive/r362596/ Log: - Switch to USES=libtool, drop .la files - Fix shebangs Approved by: portmgr blanket Modified: head/biology/plinkseq/Makefile head/biology/plinkseq/pkg-plist Modified: head/biology/plinkseq/Makefile ============================================================================== --- head/biology/plinkseq/Makefile Tue Jul 22 22:08:29 2014 (r362595) +++ head/biology/plinkseq/Makefile Tue Jul 22 22:12:15 2014 (r362596) @@ -3,7 +3,7 @@ PORTNAME= plinkseq PORTVERSION= 0.08 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= biology science MASTER_SITES= http://atgu.mgh.harvard.edu/${PORTNAME}/dist/version-${PORTVERSION}/ @@ -14,7 +14,8 @@ LICENSE= GPLv2 LIB_DEPENDS= libprotobuf.so:${PORTSDIR}/devel/protobuf -USES= dos2unix +USES= dos2unix libtool shebangfix +SHEBANG_FILES= ${WRKSRC}/browser/pbrowse.in ${WRKSRC}/index/index.in USE_LDCONFIG= yes GNU_CONFIGURE= yes CONFIGURE_ARGS+=--with-protobuf=${LOCALBASE} Modified: head/biology/plinkseq/pkg-plist ============================================================================== --- head/biology/plinkseq/pkg-plist Tue Jul 22 22:08:29 2014 (r362595) +++ head/biology/plinkseq/pkg-plist Tue Jul 22 22:12:15 2014 (r362596) @@ -7,6 +7,6 @@ bin/pbrowse bin/pbrowse.cgi bin/pseq bin/tab2vcf -lib/libplinkseq.la lib/libplinkseq.so lib/libplinkseq.so.0 +lib/libplinkseq.so.0.0.0