Date: Mon, 30 Aug 2004 23:07:27 -0700 (PDT) From: Mauricio Herrera Cuadra <arareko@yahoo.com> To: wjv@FreeBSD.org Cc: ports@FreeBSD.org Subject: FreeBSD Port: hmmer-2.2.g_1 Message-ID: <20040831060727.32223.qmail@web12309.mail.yahoo.com>
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Hi. Is it possible to install this port with PVM support? I've been tweaking the Makefiles, but no good results. I've symlinked /usr/local/include into /usr/local/lib/pvm in order to find pvm3.h during compilation, but then I get this and I'm stuck on it: [root@arareko] /usr/ports/biology/hmmer # make ===> Building for hmmer-2.2.g_1 gcc -g -O2 -DHAVE_CONFIG_H -L/usr/local/lib/pvm/lib/FREEBSD -o afetch afetch_main.o a2m.o aligneval.o alignio.o clustal.o cluster.o dayhoff.o eps.o file.o getopt.o gki.o gsi.o hsregex.o iupac.o msa.o msf.o phylip.o revcomp.o rk.o selex.o seqencode.o shuffle.o sqerror.o sqio.o squidcore.o sre_ctype.o sre_math.o sre_string.o ssi.o stack.o stockholm.o stopwatch.o translate.o types.o weight.o -lpvm3 -lm /usr/libexec/elf/ld: cannot find -lpvm3 *** Error code 1 Stop in /usr/ports/biology/hmmer/work/hmmer-2.2g/squid. *** Error code 1 Stop in /usr/ports/biology/hmmer/work/hmmer-2.2g. *** Error code 1 Stop in /usr/ports/biology/hmmer. Thanks in advance. Regards, ===== MAURICIO HERRERA CUADRA arareko@yahoo.com http://www.geocities.com/arareko/ "I've seen 5.11 divided into 11 different grades of increasing difficulty, as follows: 5.11a, 5.10d, 5.11-, 5.11b, 5.11, 5.11c, 5.9 squeeze, 5.11+, 5.10 OW, 5.12a, 5.11d" — Brutus of Wyde. -----BEGIN GEEK CODE BLOCK----- Version: 3.12 GCM/CS/IT/LS/MD/MU/PA/S/TW/O>B/M/P/AT$ d-(---)>!$ s+:+>$ a26>+++>?$ C(++++)>---$ UBL+++>UAVHIOSCX*---$ P++++(--)>--- L->+$ E-(--)>+++$ W+(+++)>-- N+>- o+++(--) K?>$ w+(---)>$ !O M>+$ !V PS+(+++) PE(-) Y(+) PGP(-)>+ t(-)>+++$ 5 X@>+$ R*>+++$ tv(+)>+$ b+>+++$ DI+++>+++$ D+++>++++$ G++(-)>++++$ e++>++++$ h!>---$ r%>++ y+(**)>+$ ------END GEEK CODE BLOCK------ _______________________________ Do you Yahoo!? Win 1 of 4,000 free domain names from Yahoo! Enter now. http://promotions.yahoo.com/goldrush
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