From owner-svn-ports-all@freebsd.org Wed Feb 13 09:51:07 2019 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 346ED14E9E0D; Wed, 13 Feb 2019 09:51:07 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id CB0DD82299; Wed, 13 Feb 2019 09:51:06 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id C004625834; Wed, 13 Feb 2019 09:51:06 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id x1D9p6gm086484; Wed, 13 Feb 2019 09:51:06 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id x1D9p5nI086474; Wed, 13 Feb 2019 09:51:05 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <201902130951.x1D9p5nI086474@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Wed, 13 Feb 2019 09:51:05 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r492840 - in head: . science science/jmol science/jmol/files X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: in head: . science science/jmol science/jmol/files X-SVN-Commit-Revision: 492840 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: CB0DD82299 X-Spamd-Bar: -- Authentication-Results: mx1.freebsd.org X-Spamd-Result: default: False [-2.94 / 15.00]; local_wl_from(0.00)[FreeBSD.org]; NEURAL_HAM_MEDIUM(-1.00)[-0.996,0]; NEURAL_HAM_SHORT(-0.94)[-0.942,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US]; NEURAL_HAM_LONG(-1.00)[-0.999,0] X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 13 Feb 2019 09:51:07 -0000 Author: yuri Date: Wed Feb 13 09:51:05 2019 New Revision: 492840 URL: https://svnweb.freebsd.org/changeset/ports/492840 Log: Re-add: science/jmol: Java 3D viewer for chemical structures Added: head/science/jmol/ - copied from r418056, head/science/jmol/ Deleted: head/science/jmol/pkg-plist Modified: head/MOVED head/science/Makefile head/science/jmol/Makefile head/science/jmol/distinfo head/science/jmol/files/jmol.in head/science/jmol/pkg-descr Modified: head/MOVED ============================================================================== --- head/MOVED Wed Feb 13 09:48:53 2019 (r492839) +++ head/MOVED Wed Feb 13 09:51:05 2019 (r492840) @@ -8355,7 +8355,6 @@ irc/slirc||2016-07-04|Has expired: Broken for more tha irc/qwebirc||2016-07-04|Has expired: Broken for more than 6 months biology/platon||2016-07-04|Has expired: Broken for more than 6 months news/slnr||2016-07-04|Has expired: Broken for more than 6 months -science/jmol||2016-07-04|Has expired: Broken for more than 6 months net/nstxd||2016-07-04|Has expired: Broken for more than 6 months net/sprinkle||2016-07-04|Has expired: Broken for more than 6 months editors/ssam||2016-07-04|Has expired: Broken for more than 6 months Modified: head/science/Makefile ============================================================================== --- head/science/Makefile Wed Feb 13 09:48:53 2019 (r492839) +++ head/science/Makefile Wed Feb 13 09:51:05 2019 (r492840) @@ -107,6 +107,7 @@ SUBDIR += iboview SUBDIR += isaac-cfd SUBDIR += jdftx + SUBDIR += jmol SUBDIR += jstrack SUBDIR += kalzium SUBDIR += kst2 Modified: head/science/jmol/Makefile ============================================================================== --- head/science/jmol/Makefile Mon Jul 4 20:44:22 2016 (r418056) +++ head/science/jmol/Makefile Wed Feb 13 09:51:05 2019 (r492840) @@ -1,46 +1,58 @@ # Created by: Wen heping # $FreeBSD$ -PORTNAME= jmol -PORTVERSION= 13.2.3 +PORTNAME= Jmol +DISTVERSION= 14.29.31 CATEGORIES= science java -MASTER_SITES= SF/${PORTNAME}/Jmol/Version%2013.2/Version%20${PORTVERSION}:source1 \ - http://jmol.svn.sourceforge.net/viewvc/jmol/trunk/Jmol/selfSignedCertificate/:source2 -DISTFILES= Jmol-${PORTVERSION}-full.tar.gz:source1 \ - selfSignedCertificate.cer:source2 \ - selfSignedCertificate.store:source2 -EXTRACT_ONLY= Jmol-${PORTVERSION}-full.tar.gz +MASTER_SITES= SF/${PORTNAME:tl}/${PORTNAME}/Version%20${DISTVERSION:R}/Jmol%20${DISTVERSION}/:src \ + http://jmol.svn.sourceforge.net/viewvc/jmol/trunk/Jmol/selfSignedCertificate/:cert +DISTFILES= ${PORTNAME}-${DISTVERSION}-full${EXTRACT_SUFX}:src \ + selfSignedCertificate.cer:cert \ + selfSignedCertificate.store:cert +EXTRACT_ONLY= ${PORTNAME}-${PORTVERSION}-full${EXTRACT_SUFX} -MAINTAINER= ports@FreeBSD.org -COMMENT= Open-source Java viewer for chemical structures in 3D +MAINTAINER= yuri@FreeBSD.org +COMMENT= Java 3D viewer for chemical structures -BROKEN= unfetchable -DEPRECATED= Broken for more than 6 months -EXPIRATION_DATE= 2016-07-04 +LICENSE= LGPL21 +LICENSE_FILE= ${WRKSRC}/LICENSE.txt USE_JAVA= yes -JAVA_VERSION= 1.7+ USE_ANT= yes -ALL_TARGET= all -WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} +NO_ARCH= yes + +WRKSRC= ${WRKDIR}/${PORTNAME:tl}-${DISTVERSION} SIGN_DIR= ${WRKSRC}/selfSignedCertificate -SUB_FILES= ${PORTNAME} +SUB_FILES= ${PORTNAME:tl} +SUB_LIST= JAVA=${JAVA} +JARS= ${PORTNAME}.jar ${PORTNAME}Data.jar ${PORTNAME}Lib.jar + +PLIST_FILES= bin/${PORTNAME:tl} \ + ${JARS:S/^/${JAVAJARDIR}\//} + OPTIONS_DEFINE= DOCS -DESKTOP_ENTRIES="Jmol" "" "" "${PORTNAME}" "" false +PORTDOCS= * +DESKTOP_ENTRIES="${PORTNAME}" "" "" "${PORTNAME:tl}" "" false + post-extract: @${MKDIR} ${SIGN_DIR} @${CP} ${DISTDIR}/selfSignedCertificate.cer ${SIGN_DIR} @${CP} ${DISTDIR}/selfSignedCertificate.store ${SIGN_DIR} +post-patch: + @${REINPLACE_CMD} 's|3D conversion, POV-Ray for images, and CAD +programs for 3D printing (VRML export). -WWW: http://sourceforge.net/projects/jmol/ +WWW: https://sourceforge.net/projects/jmol/