Date: Sat, 12 Nov 2011 15:12:52 GMT From: Oliver Hartmann <ohartman@mailzedat.fu-berlin.de> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/162500: math/suitesparse: gmake[2]: *** [run] Segmentation fault: 11 (core dumped) Message-ID: <201111121512.pACFCqSe048098@red.freebsd.org> Resent-Message-ID: <201111121520.pACFKBh1065856@freefall.freebsd.org>
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>Number: 162500 >Category: ports >Synopsis: math/suitesparse: gmake[2]: *** [run] Segmentation fault: 11 (core dumped) >Confidential: no >Severity: critical >Priority: medium >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: sw-bug >Submitter-Id: current-users >Arrival-Date: Sat Nov 12 15:20:10 UTC 2011 >Closed-Date: >Last-Modified: >Originator: Oliver Hartmann >Release: FreeBSD 9.0-RC2/amd64 and FreeBSD 101.0-CURRENT/amd64 >Organization: FU Berlin >Environment: >Description: When trying to install math/suitesparse (which is needed for the USGS free software package ISIS 3.3.0), I receive on both FreeBSD 9.0-RC2 and FreeBSD 10.0/amd64 the following error. The machines are three different boxes, two different CPU architectures. Two boxes have FreeBSD 9.0-RC2/amd as built world today with either a Intel Core2 Q6600 CPU and one (notebook) with a Core i5-5XX (Clarkdale, both options -march=native and -march=core2 fail)). The third box is a Intel Core2 E8400-based based box driven by FreeBSD 10.0-CURRENT/amd64 (all system have builtwolrds by CLANG): gmake[2]: Leaving directory `/usr/ports/math/suitesparse/work/SuiteSparse/UMFPACK/Lib' ( cd Demo ; gmake ) gmake[2]: Entering directory `/usr/ports/math/suitesparse/work/SuiteSparse/UMFPACK/Demo' gcc46 -O3 -fno-strict-aliasing -pipe -march=native -Wl,-rpath=/usr/local/lib/gcc46 -fexceptions -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_di_demo umfpack_di_demo.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a ../../CHOLMOD/Lib/libcholmod.a ../../COLAMD/Lib/libcolamd.a ../../CAMD/Lib/libcamd.a ../../CCOLAMD/Lib/libccolamd.a -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc46 -lgoto2p -pthread -lm gcc46 -O3 -fno-strict-aliasing -pipe -march=native -Wl,-rpath=/usr/local/lib/gcc46 -fexceptions -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_zi_demo umfpack_zi_demo.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a ../../CHOLMOD/Lib/libcholmod.a ../../COLAMD/Lib/libcolamd.a ../../CAMD/Lib/libcamd.a ../../CCOLAMD/Lib/libccolamd.a -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc46 -lgoto2p -pthread -lm gcc46 -O3 -fno-strict-aliasing -pipe -march=native -Wl,-rpath=/usr/local/lib/gcc46 -fexceptions -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_dl_demo umfpack_dl_demo.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a ../../CHOLMOD/Lib/libcholmod.a ../../COLAMD/Lib/libcolamd.a ../../CAMD/Lib/libcamd.a ../../CCOLAMD/Lib/libccolamd.a -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc46 -lgoto2p -pthread -lm gcc46 -O3 -fno-strict-aliasing -pipe -march=native -Wl,-rpath=/usr/local/lib/gcc46 -fexceptions -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_zl_demo umfpack_zl_demo.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a ../../CHOLMOD/Lib/libcholmod.a ../../COLAMD/Lib/libcolamd.a ../../CAMD/Lib/libcamd.a ../../CCOLAMD/Lib/libccolamd.a -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc46 -lgoto2p -pthread -lm gcc46 -O3 -fno-strict-aliasing -pipe -march=native -Wl,-rpath=/usr/local/lib/gcc46 -fexceptions -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_simple umfpack_simple.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a ../../CHOLMOD/Lib/libcholmod.a ../../COLAMD/Lib/libcolamd.a ../../CAMD/Lib/libcamd.a ../../CCOLAMD/Lib/libccolamd.a -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc46 -lgoto2p -pthread -lm ./umfpack_simple gmake[2]: *** [run] Segmentation fault: 11 (core dumped) gmake[2]: Leaving directory `/usr/ports/math/suitesparse/work/SuiteSparse/UMFPACK/Demo' gmake[1]: *** [all] Error 2 gmake[1]: Leaving directory `/usr/ports/math/suitesparse/work/SuiteSparse/UMFPACK' gmake: *** [default] Error 2 *** Error code 2 Stop in /usr/ports/math/suitesparse. ===>>> make failed for math/suitesparse >How-To-Repeat: Install math/suitesparse on the above mentioned operating systems on equivalent hardware and setups. >Fix: >Release-Note: >Audit-Trail: >Unformatted:
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