From owner-cvs-ports@FreeBSD.ORG Mon Jun 22 12:46:57 2009 Return-Path: Delivered-To: cvs-ports@FreeBSD.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 0BC58106564A; Mon, 22 Jun 2009 12:46:57 +0000 (UTC) (envelope-from miwi@FreeBSD.org) Received: from repoman.freebsd.org (repoman.freebsd.org [IPv6:2001:4f8:fff6::29]) by mx1.freebsd.org (Postfix) with ESMTP id EF4BB8FC1C; Mon, 22 Jun 2009 12:46:56 +0000 (UTC) (envelope-from miwi@FreeBSD.org) Received: from repoman.freebsd.org (localhost [127.0.0.1]) by repoman.freebsd.org (8.14.3/8.14.3) with ESMTP id n5MCkuBQ095226; Mon, 22 Jun 2009 12:46:56 GMT (envelope-from miwi@repoman.freebsd.org) Received: (from miwi@localhost) by repoman.freebsd.org (8.14.3/8.14.3/Submit) id n5MCkuac095225; Mon, 22 Jun 2009 12:46:56 GMT (envelope-from miwi) Message-Id: <200906221246.n5MCkuac095225@repoman.freebsd.org> From: Martin Wilke Date: Mon, 22 Jun 2009 12:46:56 +0000 (UTC) To: ports-committers@FreeBSD.org, cvs-ports@FreeBSD.org, cvs-all@FreeBSD.org X-FreeBSD-CVS-Branch: HEAD Cc: Subject: cvs commit: ports/biology Makefile ports/biology/pycogent Makefile distinfo pkg-descr pkg-plist X-BeenThere: cvs-ports@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: CVS commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 22 Jun 2009 12:46:57 -0000 miwi 2009-06-22 12:46:56 UTC FreeBSD ports repository Modified files: biology Makefile Added files: biology/pycogent Makefile distinfo pkg-descr pkg-plist Log: PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for: controlling third-party applications; devising workflows; querying databases; conducting novel probabilistic analyses of biological sequence evolution; and generating publication quality graphics. It is distinguished by many unique built-in capabilities (such as true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data. WWW: http://pycogent.sourceforge.net/ PR: ports/135863 Submitted by: Wen Heping Revision Changes Path 1.109 +1 -0 ports/biology/Makefile 1.1 +28 -0 ports/biology/pycogent/Makefile (new) 1.1 +3 -0 ports/biology/pycogent/distinfo (new) 1.1 +9 -0 ports/biology/pycogent/pkg-descr (new) 1.1 +846 -0 ports/biology/pycogent/pkg-plist (new)