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Wed, 16 Jan 2019 04:36:13 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id x0G4aDvr057934; Wed, 16 Jan 2019 04:36:13 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id x0G4aCLk057930; Wed, 16 Jan 2019 04:36:12 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <201901160436.x0G4aCLk057930@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Wed, 16 Jan 2019 04:36:12 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r490442 - in head/science/tinker: . files X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: in head/science/tinker: . files X-SVN-Commit-Revision: 490442 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 842018AFE8 X-Spamd-Bar: -- Authentication-Results: mx1.freebsd.org X-Spamd-Result: default: False [-2.96 / 15.00]; local_wl_from(0.00)[FreeBSD.org]; NEURAL_HAM_MEDIUM(-1.00)[-0.999,0]; NEURAL_HAM_LONG(-1.00)[-0.999,0]; NEURAL_HAM_SHORT(-0.97)[-0.965,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US] X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 16 Jan 2019 04:36:14 -0000 Author: yuri Date: Wed Jan 16 04:36:12 2019 New Revision: 490442 URL: https://svnweb.freebsd.org/changeset/ports/490442 Log: science/tinker: Update 8.4.4 -> 8.5.3 Reported by: portscout Modified: head/science/tinker/Makefile head/science/tinker/distinfo head/science/tinker/files/patch-make_Makefile head/science/tinker/pkg-plist Modified: head/science/tinker/Makefile ============================================================================== --- head/science/tinker/Makefile Wed Jan 16 01:30:03 2019 (r490441) +++ head/science/tinker/Makefile Wed Jan 16 04:36:12 2019 (r490442) @@ -2,8 +2,7 @@ # $FreeBSD$ PORTNAME= tinker -DISTVERSION= 8.4.4 -PORTREVISION= 2 +DISTVERSION= 8.5.3 CATEGORIES= science MASTER_SITES= https://dasher.wustl.edu/tinker/downloads/ Modified: head/science/tinker/distinfo ============================================================================== --- head/science/tinker/distinfo Wed Jan 16 01:30:03 2019 (r490441) +++ head/science/tinker/distinfo Wed Jan 16 04:36:12 2019 (r490442) @@ -1,3 +1,3 @@ -TIMESTAMP = 1538861663 -SHA256 (tinker-8.4.4.tar.gz) = c263298383bcd5a72f281d25640f7be2e9c465e08c1a61c3c3de59b6bb828da6 -SIZE (tinker-8.4.4.tar.gz) = 35549655 +TIMESTAMP = 1547612122 +SHA256 (tinker-8.5.3.tar.gz) = 96ede325ce32a1a330d1e9e62258b089a9a8563769b16eb42705e6415355ed86 +SIZE (tinker-8.5.3.tar.gz) = 41931411 Modified: head/science/tinker/files/patch-make_Makefile ============================================================================== --- head/science/tinker/files/patch-make_Makefile Wed Jan 16 01:30:03 2019 (r490441) +++ head/science/tinker/files/patch-make_Makefile Wed Jan 16 04:36:12 2019 (r490442) @@ -1,4 +1,4 @@ ---- make/Makefile.orig 2018-05-01 03:12:05 UTC +--- make/Makefile.orig 2019-01-16 04:21:45 UTC +++ make/Makefile @@ -84,7 +84,7 @@ APBS_LIBS = -lapbsmainroutines -lapbs -l @@ -6,10 +6,10 @@ F77FLAGS = -c -OPTFLAGS = -Ofast -mssse3 -fopenmp +OPTFLAGS = -Ofast $(PORT_SIMD_FLAGS) -fopenmp + #OPTFLAGS = -Og -fbacktrace -fcheck=bounds -Wunused -Wmaybe-uninitialized LIBDIR = -L. -L$(TINKER_LIBDIR)/macos LIBS = - LIBFLAGS = -crusv -@@ -754,130 +754,130 @@ listing: +@@ -787,132 +787,132 @@ listing: cat *.f *.c > tinker.txt rename_bin: @@ -61,6 +61,7 @@ - mv testpair.x $(BINDIR)/testpair - mv testpol.x $(BINDIR)/testpol - mv testrot.x $(BINDIR)/testrot +- mv testvir.x $(BINDIR)/testvir - mv timer.x $(BINDIR)/timer - mv timerot.x $(BINDIR)/timerot - mv torsfit.x $(BINDIR)/torsfit @@ -122,6 +123,7 @@ + ${BSD_INSTALL_PROGRAM} testpair.x $(BINDIR)/testpair + ${BSD_INSTALL_PROGRAM} testpol.x $(BINDIR)/testpol + ${BSD_INSTALL_PROGRAM} testrot.x $(BINDIR)/testrot ++ ${BSD_INSTALL_PROGRAM} testvir.x $(BINDIR)/testvir + ${BSD_INSTALL_PROGRAM} timer.x $(BINDIR)/timer + ${BSD_INSTALL_PROGRAM} timerot.x $(BINDIR)/timerot + ${BSD_INSTALL_PROGRAM} torsfit.x $(BINDIR)/torsfit @@ -185,6 +187,7 @@ - mv testpair.x $(BINDIR)/testpair.exe - mv testpol.x $(BINDIR)/testpol.exe - mv testrot.x $(BINDIR)/testrot.exe +- mv testvir.x $(BINDIR)/testvir.exe - mv timer.x $(BINDIR)/timer.exe - mv timerot.x $(BINDIR)/timerot.exe - mv torsfit.x $(BINDIR)/torsfit.exe @@ -246,6 +249,7 @@ + ${BSD_INSTALL_PROGRAM} testpair.x $(BINDIR)/testpair.exe + ${BSD_INSTALL_PROGRAM} testpol.x $(BINDIR)/testpol.exe + ${BSD_INSTALL_PROGRAM} testrot.x $(BINDIR)/testrot.exe ++ ${BSD_INSTALL_PROGRAM} testvir.x $(BINDIR)/testvir.exe + ${BSD_INSTALL_PROGRAM} timer.x $(BINDIR)/timer.exe + ${BSD_INSTALL_PROGRAM} timerot.x $(BINDIR)/timerot.exe + ${BSD_INSTALL_PROGRAM} torsfit.x $(BINDIR)/torsfit.exe Modified: head/science/tinker/pkg-plist ============================================================================== --- head/science/tinker/pkg-plist Wed Jan 16 01:30:03 2019 (r490441) +++ head/science/tinker/pkg-plist Wed Jan 16 04:36:12 2019 (r490442) @@ -46,6 +46,7 @@ bin/testhess bin/testpair bin/testpol bin/testrot +bin/testvir bin/timer bin/timerot bin/torsfit @@ -76,6 +77,7 @@ bin/xyzpdb %%DATADIR%%/params/charmm22.prm %%DATADIR%%/params/charmm22cmap.prm %%DATADIR%%/params/dang.prm +%%DATADIR%%/params/hippo18.prm %%DATADIR%%/params/hoch.prm %%DATADIR%%/params/iwater.prm %%DATADIR%%/params/mm2.prm