Date: Thu, 29 Oct 2015 06:25:30 GMT From: pkg-fallout@FreeBSD.org To: tota@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 101amd64-default][www/R-cran-Rpad] Failed for R-cran-Rpad-1.3.0_14 in stage Message-ID: <201510290625.t9T6PU9u087954@beefy6.nyi.freebsd.org>
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Maintainer: tota@FreeBSD.org Last committer: amdmi3@FreeBSD.org Ident: $FreeBSD: head/www/R-cran-Rpad/Makefile 400053 2015-10-23 20:15:25Z amdmi3 $ Log URL: http://beefy6.nyi.freebsd.org/data/101amd64-default/400425/logs/R-cran-Rpad-1.3.0_14.log Build URL: http://beefy6.nyi.freebsd.org/build.html?mastername=101amd64-default&build=400425 Log: ====>> Building www/R-cran-Rpad build started at Thu Oct 29 06:24:38 UTC 2015 port directory: /usr/ports/www/R-cran-Rpad building for: FreeBSD 101amd64-default-job-06 10.1-RELEASE-p23 FreeBSD 10.1-RELEASE-p23 amd64 maintained by: tota@FreeBSD.org Makefile ident: $FreeBSD: head/www/R-cran-Rpad/Makefile 400053 2015-10-23 20:15:25Z amdmi3 $ Poudriere version: 3.1.9 Host OSVERSION: 1100079 Jail OSVERSION: 1001000 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1001000 UNAME_v=FreeBSD 10.1-RELEASE-p23 UNAME_r=10.1-RELEASE-p23 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/101amd64-default/ref PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNAME=R-cran-Rpad-1.3.0_14 OLDPWD=/ PWD=/usr/local/poudriere/data/.m/101amd64-default/ref/.p/pool MASTERNAME=101amd64-default SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root POUDRIERE_VERSION=3.1.9 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/www/R-cran-Rpad/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/www/R-cran-Rpad/work HOME=/wrkdirs/usr/ports/www/R-cran-Rpad/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/www/R-cran-Rpad/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/www/R-cran-Rpad/work HOME=/wrkdirs/usr/ports/www/R-cran-Rpad/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/Rpad OSREL=10.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/Rpad" EXAMPLESDIR="share/examples/Rpad" DATADIR="share/Rpad" WWWDIR="www/Rpad" ETCDIR="etc/Rpad" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/Rpad DOCSDIR=/usr/local/share/doc/Rpad EXAMPLESDIR=/usr/local/share/examples/Rpad WWWDIR=/usr/local/www/Rpad ETCDIR=/usr/local/etc/Rpad --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> R-cran-Rpad-1.3.0_14 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.6.1_1.txz [101amd64-default-job-06] Installing pkg-1.6.1_1... [101amd64-default-job-06] Extracting pkg-1.6.1_1: .......... done Message from pkg-1.6.1_1: If you are upgrading from the old package format, first run: # pkg2ng ===> R-cran-Rpad-1.3.0_14 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-Rpad-1.3.0_14 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-cran-Rpad-1.3.0_14 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-cran-Rpad-1.3.0_14 for building => SHA256 Checksum OK for Rpad_1.3.0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by R-cran-Rpad-1.3.0_14 for building ===> Extracting for R-cran-Rpad-1.3.0_14 => SHA256 Checksum OK for Rpad_1.3.0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for R-cran-Rpad-1.3.0_14 =========================================================================== =======================<phase: build-depends >============================ ===> R-cran-Rpad-1.3.0_14 depends on file: /usr/local/bin/R - not found ===> Installing existing package /packages/All/R-3.2.2.txz [101amd64-default-job-06] Installing R-3.2.2... [101amd64-default-job-06] `-- Installing indexinfo-0.2.4... [101amd64-default-job-06] `-- Extracting indexinfo-0.2.4: .... done [101amd64-default-job-06] `-- Installing libXt-1.1.5,1... [101amd64-default-job-06] | `-- Installing xproto-7.0.28... [101amd64-default-job-06] | `-- Extracting xproto-7.0.28: .......... done [101amd64-default-job-06] | `-- Installing libSM-1.2.2_3,1... [101amd64-default-job-06] | | `-- Installing libICE-1.0.9_1,1... [101amd64-default-job-06] | | `-- Extracting libICE-1.0.9_1,1: .......... done [101amd64-default-job-06] | `-- Extracting libSM-1.2.2_3,1: .......... done [101amd64-default-job-06] | `-- Installing libX11-1.6.3,1... [101amd64-default-job-06] | | `-- Installing kbproto-1.0.7... [101amd64-default-job-06] | | `-- Extracting kbproto-1.0.7: .......... done [101amd64-default-job-06] | | `-- Installing libXdmcp-1.1.2... [101amd64-default-job-06] | | `-- Extracting libXdmcp-1.1.2: ......... done [101amd64-default-job-06] | | `-- Installing libxcb-1.11.1... [101amd64-default-job-06] | | `-- Installing libxml2-2.9.2_3... [101amd64-default-job-06] | | `-- Extracting libxml2-2.9.2_3: .......... done [101amd64-default-job-06] | | `-- Installing libpthread-stubs-0.3_6... [101amd64-default-job-06] | | `-- Extracting libpthread-stubs-0.3_6: ..... done [101amd64-default-job-06] | | `-- Installing libXau-1.0.8_3... [101amd64-default-job-06] | | `-- Extracting libXau-1.0.8_3: .......... done [101amd64-default-job-06] | | `-- Extracting libxcb-1.11.1: .......... done [101amd64-default-job-06] | `-- Extracting libX11-1.6.3,1: .......... done [101amd64-default-job-06] `-- Extracting libXt-1.1.5,1: .......... done [101amd64-default-job-06] `-- Installing pango-1.36.8_2... [101amd64-default-job-06] | `-- Installing encodings-1.0.4_3,1... [101amd64-default-job-06] | | `-- Installing font-util-1.3.1... [101amd64-default-job-06] | | `-- Extracting font-util-1.3.1: .......... done [101amd64-default-job-06] | `-- Extracting encodings-1.0.4_3,1: .......... done [101amd64-default-job-06] | `-- Installing fontconfig-2.11.1,1... [101amd64-default-job-06] | | `-- Installing expat-2.1.0_3... [101amd64-default-job-06] | | `-- Extracting expat-2.1.0_3: .......... done [101amd64-default-job-06] | | `-- Installing freetype2-2.6_1... [101amd64-default-job-06] | | `-- Extracting freetype2-2.6_1: .......... done [101amd64-default-job-06] | `-- Extracting fontconfig-2.11.1,1: .......... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: caching, new cache contents: 0 fonts, 2 dirs /usr/local/share/fonts/encodings: caching, new cache contents: 0 fonts, 1 dirs /usr/local/share/fonts/encodings/large: caching, new cache contents: 0 fonts, 0 dirs /usr/local/share/fonts/util: caching, new cache contents: 0 fonts, 0 dirs /usr/local/lib/X11/fonts: skipping, no such directory /root/.local/share/fonts: skipping, no such directory /root/.fonts: skipping, no such directory Re-scanning /usr/local/share/fonts: caching, new cache contents: 0 fonts, 2 dirs Re-scanning /usr/local/share/fonts/encodings: caching, new cache contents: 0 fonts, 1 dirs /var/db/fontconfig: cleaning cache directory /root/.cache/fontconfig: not cleaning non-existent cache directory /root/.fontconfig: not cleaning non-existent cache directory fc-cache: succeeded [101amd64-default-job-06] | `-- Installing libXft-2.3.2_1... [101amd64-default-job-06] | | `-- Installing libXrender-0.9.9... [101amd64-default-job-06] | | `-- Installing renderproto-0.11.1... [101amd64-default-job-06] | | `-- Extracting renderproto-0.11.1: .... done [101amd64-default-job-06] | | `-- Extracting libXrender-0.9.9: .......... done [101amd64-default-job-06] | `-- Extracting libXft-2.3.2_1: ......... done [101amd64-default-job-06] | `-- Installing harfbuzz-1.0.6... [101amd64-default-job-06] | | `-- Installing cairo-1.14.2,2... [101amd64-default-job-06] | | `-- Installing dri2proto-2.8... [101amd64-default-job-06] | | `-- Extracting dri2proto-2.8: .... done [101amd64-default-job-06] | | `-- Installing glproto-1.4.17... [101amd64-default-job-06] | | `-- Extracting glproto-1.4.17: ...... done [101amd64-default-job-06] | | `-- Installing libXext-1.3.3_1,1... [101amd64-default-job-06] | | | `-- Installing xextproto-7.3.0... [101amd64-default-job-06] | | | `-- Extracting xextproto-7.3.0: .......... done [101amd64-default-job-06] | | `-- Extracting libXext-1.3.3_1,1: .......... done [101amd64-default-job-06] | | `-- Installing libEGL-10.6.9... [101amd64-default-job-06] | | | `-- Installing libdevq-0.0.2_1... [101amd64-default-job-06] | | | `-- Extracting libdevq-0.0.2_1: ..... done [101amd64-default-job-06] | | | `-- Installing libXdamage-1.1.4_3... <snip> [101amd64-default-job-06] `-- Extracting pango-1.36.8_2: .......... done [101amd64-default-job-06] `-- Installing gcc-4.8.5... [101amd64-default-job-06] | `-- Installing mpc-1.0.3... [101amd64-default-job-06] | | `-- Installing gmp-5.1.3_2... [101amd64-default-job-06] | | `-- Extracting gmp-5.1.3_2: .......... done [101amd64-default-job-06] | | `-- Installing mpfr-3.1.2_2... [101amd64-default-job-06] | | `-- Extracting mpfr-3.1.2_2: .......... done [101amd64-default-job-06] | `-- Extracting mpc-1.0.3: ...... done [101amd64-default-job-06] | `-- Installing binutils-2.25.1... [101amd64-default-job-06] | `-- Extracting binutils-2.25.1: .......... done [101amd64-default-job-06] | `-- Installing gcc-ecj-4.5... [101amd64-default-job-06] | `-- Extracting gcc-ecj-4.5: . done [101amd64-default-job-06] `-- Extracting gcc-4.8.5: .......... done [101amd64-default-job-06] `-- Installing gsed-4.2.2... [101amd64-default-job-06] `-- Extracting gsed-4.2.2: .......... done [101amd64-default-job-06] `-- Installing tiff-4.0.6... [101amd64-default-job-06] | `-- Installing jbigkit-2.1_1... [101amd64-default-job-06] | `-- Extracting jbigkit-2.1_1: .......... done [101amd64-default-job-06] | `-- Installing jpeg-turbo-1.4.2... [101amd64-default-job-06] | `-- Extracting jpeg-turbo-1.4.2: .......... done [101amd64-default-job-06] `-- Extracting tiff-4.0.6: .......... done [101amd64-default-job-06] `-- Installing tk86-8.6.4... [101amd64-default-job-06] | `-- Installing tcl86-8.6.4... [101amd64-default-job-06] | `-- Extracting tcl86-8.6.4: .......... done [101amd64-default-job-06] | `-- Installing libXScrnSaver-1.2.2_3... [101amd64-default-job-06] | | `-- Installing scrnsaverproto-1.2.2... [101amd64-default-job-06] | | `-- Extracting scrnsaverproto-1.2.2: ... done [101amd64-default-job-06] | `-- Extracting libXScrnSaver-1.2.2_3: .......... done [101amd64-default-job-06] `-- Extracting tk86-8.6.4: .......... done [101amd64-default-job-06] `-- Installing libXmu-1.1.2_3,1... [101amd64-default-job-06] `-- Extracting libXmu-1.1.2_3,1: .......... done [101amd64-default-job-06] `-- Installing ghostscript9-base-9.06_11... [101amd64-default-job-06] | `-- Installing cups-image-2.0.3_2... [101amd64-default-job-06] | | `-- Installing cups-client-2.0.3_2... [101amd64-default-job-06] | | `-- Installing libgcrypt-1.6.4... [101amd64-default-job-06] | | | `-- Installing libgpg-error-1.20... [101amd64-default-job-06] | | | `-- Extracting libgpg-error-1.20: .......... done [101amd64-default-job-06] | | `-- Extracting libgcrypt-1.6.4: .......... done [101amd64-default-job-06] | | `-- Installing gnutls-3.3.17.1... [101amd64-default-job-06] | | | `-- Installing nettle-2.7.1... [101amd64-default-job-06] | | | `-- Extracting nettle-2.7.1: .......... done [101amd64-default-job-06] | | | `-- Installing ca_root_nss-3.20... [101amd64-default-job-06] | | | `-- Extracting ca_root_nss-3.20: ....... done [101amd64-default-job-06] | | | `-- Installing libtasn1-4.7... [101amd64-default-job-06] | | | `-- Extracting libtasn1-4.7: .......... done [101amd64-default-job-06] | | | `-- Installing libidn-1.31... [101amd64-default-job-06] | | | `-- Extracting libidn-1.31: .......... done [101amd64-default-job-06] | | | `-- Installing p11-kit-0.23.1_1... [101amd64-default-job-06] | | | `-- Extracting p11-kit-0.23.1_1: .......... done [101amd64-default-job-06] | | | `-- Installing trousers-tddl-0.3.10_7... ===> Creating users and/or groups. Creating group '_tss' with gid '601'. Creating user '_tss' with uid '601'. [101amd64-default-job-06] | | | `-- Extracting trousers-tddl-0.3.10_7: .......... done [101amd64-default-job-06] | | `-- Extracting gnutls-3.3.17.1: .......... done [101amd64-default-job-06] | | `-- Installing mDNSResponder-576.30.4... [101amd64-default-job-06] | | `-- Extracting mDNSResponder-576.30.4: .......... done ===> Creating users and/or groups. Creating group 'cups' with gid '193'. Creating user 'cups' with uid '193'. [101amd64-default-job-06] | | `-- Extracting cups-client-2.0.3_2: .......... done ===> Creating users and/or groups. Using existing group 'cups'. Using existing user 'cups'. [101amd64-default-job-06] | `-- Extracting cups-image-2.0.3_2: .......... done [101amd64-default-job-06] | `-- Installing jbig2dec-0.11_4... [101amd64-default-job-06] | `-- Extracting jbig2dec-0.11_4: .......... done [101amd64-default-job-06] | `-- Installing libpaper-1.1.24.4... [101amd64-default-job-06] | `-- Extracting libpaper-1.1.24.4: .......... done [101amd64-default-job-06] | `-- Installing svgalib-1.4.3_7... [101amd64-default-job-06] | `-- Extracting svgalib-1.4.3_7: .......... done [101amd64-default-job-06] | `-- Installing lcms2-2.7_1... [101amd64-default-job-06] | `-- Extracting lcms2-2.7_1: .......... done [101amd64-default-job-06] | `-- Installing gsfonts-8.11_6... [101amd64-default-job-06] | `-- Extracting gsfonts-8.11_6: .......... done [101amd64-default-job-06] `-- Extracting ghostscript9-base-9.06_11: .......... done [101amd64-default-job-06] Extracting R-3.2.2: .......... done Message from python27-2.7.10_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== Message from perl5-5.20.3_8: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Message from dejavu-2.35: Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Message from gcc-4.8.5: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc48 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message from ca_root_nss-3.20: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from trousers-tddl-0.3.10_7: To run tcsd automatically, add the following line to /etc/rc.conf tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. To use TPM, add your_account to '_tss' group like following: # pw groupadd _tss -m your_account Message from ghostscript9-base-9.06_11: Note: in order to use the script "dvipdf", dvips must be installed. This program is provided by another package print/tex-dvipsk. FAPIfontmap and FAPIcidfmap in /usr/local/share/ghostscript/9.06/Resource/Init have to be configured if you want to use FAPI feature. ===> R-cran-Rpad-1.3.0_14 depends on file: /usr/local/bin/R - found ===> Returning to build of R-cran-Rpad-1.3.0_14 =========================================================================== =======================<phase: lib-depends >============================ =========================================================================== =======================<phase: configure >============================ ===> Configuring for R-cran-Rpad-1.3.0_14 =========================================================================== =======================<phase: build >============================ =========================================================================== =======================<phase: run-depends >============================ ===> R-cran-Rpad-1.3.0_14 depends on file: /usr/local/bin/R - found =========================================================================== =======================<phase: stage >============================ ===> Staging for R-cran-Rpad-1.3.0_14 ===> Generating temporary packing list * installing *source* package 'Rpad' ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded Error : .onLoad failed in loadNamespace() for 'Rpad', details: call: NULL error: '.find.package' is defunct. Use 'find.package' instead. See help("Defunct") Error: loading failed Execution halted ERROR: loading failed * removing '/wrkdirs/usr/ports/www/R-cran-Rpad/work/stage/usr/local/lib/R/library/Rpad' *** Error code 1 Stop. make: stopped in /usr/ports/www/R-cran-Rpad
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