From owner-freebsd-ports-bugs@FreeBSD.ORG Wed Feb 8 19:10:13 2006 Return-Path: X-Original-To: freebsd-ports-bugs@hub.freebsd.org Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 6A97816A420 for ; Wed, 8 Feb 2006 19:10:13 +0000 (GMT) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [216.136.204.21]) by mx1.FreeBSD.org (Postfix) with ESMTP id BFC1443D48 for ; Wed, 8 Feb 2006 19:10:07 +0000 (GMT) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (gnats@localhost [127.0.0.1]) by freefall.freebsd.org (8.13.4/8.13.4) with ESMTP id k18JA76R010091 for ; Wed, 8 Feb 2006 19:10:07 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.13.4/8.13.4/Submit) id k18JA7b4010090; Wed, 8 Feb 2006 19:10:07 GMT (envelope-from gnats) Resent-Date: Wed, 8 Feb 2006 19:10:07 GMT Resent-Message-Id: <200602081910.k18JA7b4010090@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Fernan Aguero Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id DC12116A422 for ; Wed, 8 Feb 2006 19:02:15 +0000 (GMT) (envelope-from fernan@omega.iib.unsam.edu.ar) Received: from omega.iib.unsam.edu.ar (omega.iib.unsam.edu.ar [170.210.49.14]) by mx1.FreeBSD.org (Postfix) with ESMTP id E71FD43D60 for ; Wed, 8 Feb 2006 19:02:08 +0000 (GMT) (envelope-from fernan@omega.iib.unsam.edu.ar) Received: from omega.iib.unsam.edu.ar (localhost [127.0.0.1]) by omega.iib.unsam.edu.ar (8.13.4/8.13.4) with ESMTP id k18J22M5037543 for ; Wed, 8 Feb 2006 16:02:03 -0300 (ART) (envelope-from fernan@omega.iib.unsam.edu.ar) Received: (from fernan@localhost) by omega.iib.unsam.edu.ar (8.13.4/8.13.3/Submit) id k18J22wn037540; Wed, 8 Feb 2006 16:02:02 -0300 (ART) (envelope-from fernan) Message-Id: <200602081902.k18J22wn037540@omega.iib.unsam.edu.ar> Date: Wed, 8 Feb 2006 16:02:02 -0300 (ART) From: Fernan Aguero To: FreeBSD-gnats-submit@FreeBSD.org X-Send-Pr-Version: 3.113 Cc: Subject: ports/93051: update biology/seaview, make fetchable again X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list Reply-To: Fernan Aguero List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 08 Feb 2006 19:10:13 -0000 X-List-Received-Date: Wed, 08 Feb 2006 19:10:13 -0000 >Number: 93051 >Category: ports >Synopsis: update biology/seaview, make fetchable again >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Wed Feb 08 19:10:07 GMT 2006 >Closed-Date: >Last-Modified: >Originator: Fernan Aguero >Release: FreeBSD 6.0-RELEASE-p4 i386 >Organization: IIB-UNSAM >Environment: System: FreeBSD omega.iib.unsam.edu.ar 6.0-RELEASE-p4 FreeBSD 6.0-RELEASE-p4 #0: Wed Jan 25 12:43:39 ART 2006 fernan@omega.iib.unsam.edu.ar:/usr/obj/usr/src/sys/OMEGA i386 >Description: i. the update brings seaview to the latest version ii. the author will be providing the current version both in the old MASTER_SITES (as seaview.tar) and in the new MASTER_SITES/archive (as seaviewYYYYMMDD.tar) so this will solve the fetchability issue when new versions come out. >How-To-Repeat: >Fix: --- seaview.diff begins here --- diff -ruN /usr/ports/biology/seaview/Makefile seaview/Makefile --- /usr/ports/biology/seaview/Makefile Mon Jan 2 14:10:12 2006 +++ seaview/Makefile Wed Jan 25 15:18:42 2006 @@ -7,12 +7,11 @@ # PORTNAME= seaview -PORTVERSION= 2006.01.01 +PORTVERSION= 2006.01.25 CATEGORIES= biology -MASTER_SITES= ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/ -DISTNAME= ${PORTNAME} +MASTER_SITES= ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/ +DISTNAME= ${PORTNAME}${PORTVERSION:S/.//g} EXTRACT_SUFX= .tar -DIST_SUBDIR= ${PORTNAME}-${PORTVERSION} MAINTAINER= fernan@iib.unsam.edu.ar COMMENT= Multiple DNA/protein sequence alignment editor @@ -30,9 +29,9 @@ -D DEFAULT_HELPFILE=${PREFIX}/lib/X11/${PORTNAME}/seaview.help do-install: - @${INSTALL_PROGRAM} ${WRKSRC}/${DISTNAME} ${PREFIX}/bin - @${INSTALL_SCRIPT} ${WRKSRC}/seaview_align.sh ${PREFIX}/bin + ${INSTALL_PROGRAM} ${WRKDIR}/${PORTNAME} ${PREFIX}/bin + ${INSTALL_SCRIPT} ${WRKDIR}/seaview_align.sh ${PREFIX}/bin @${MKDIR} ${PREFIX}/lib/X11/${PORTNAME} - @${INSTALL_DATA} ${WRKSRC}/seaview.help ${PREFIX}/lib/X11/${PORTNAME} + ${INSTALL_DATA} ${WRKDIR}/seaview.help ${PREFIX}/lib/X11/${PORTNAME} .include diff -ruN /usr/ports/biology/seaview/distinfo seaview/distinfo --- /usr/ports/biology/seaview/distinfo Mon Jan 2 14:10:12 2006 +++ seaview/distinfo Wed Jan 25 14:20:42 2006 @@ -1,3 +1,3 @@ -MD5 (seaview-2006.01.01/seaview.tar) = 4d1d1406f5d9ae0a0edad7144742143b -SHA256 (seaview-2006.01.01/seaview.tar) = ced1844ca3fc8181a9c811079dbc8e2ee67242ef49be113f761abad034ba8ba3 -SIZE (seaview-2006.01.01/seaview.tar) = 595968 +MD5 (seaview20060125.tar) = c6b9b014fa26a7d53f8f40d370cbf4ef +SHA256 (seaview20060125.tar) = 5d4eed74d60b2dec3d41a50dfccd648cf24a7e2b0466d57c840346aa2c24aff2 +SIZE (seaview20060125.tar) = 600576 --- seaview.diff ends here --- >Release-Note: >Audit-Trail: >Unformatted: