Date: Mon, 17 Jun 2024 01:20:57 GMT From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 324d0273f590 - main - biology/py-gffutils: update 0.11.1 =?utf-8?Q?=E2=86=92?= 0.13 Message-ID: <202406170120.45H1Kvp8060951@gitrepo.freebsd.org>
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The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=324d0273f590995b10c92008d0dc4fa5889ea0a5 commit 324d0273f590995b10c92008d0dc4fa5889ea0a5 Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2024-06-16 23:04:09 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2024-06-17 01:20:35 +0000 biology/py-gffutils: update 0.11.1 → 0.13 --- biology/py-gffutils/Makefile | 10 ++++++++-- biology/py-gffutils/distinfo | 6 +++--- 2 files changed, 11 insertions(+), 5 deletions(-) diff --git a/biology/py-gffutils/Makefile b/biology/py-gffutils/Makefile index d7a3a74860a9..bf0a0a44ef14 100644 --- a/biology/py-gffutils/Makefile +++ b/biology/py-gffutils/Makefile @@ -1,5 +1,5 @@ PORTNAME= gffutils -DISTVERSION= 0.11.1 +DISTVERSION= 0.13 CATEGORIES= biology python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -17,8 +17,14 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}argcomplete>=1.9.4:devel/py-argcomplete@${PY ${PYTHON_PKGNAMEPREFIX}six>=1.12.0:devel/py-six@${PY_FLAVOR} USES= python -USE_PYTHON= distutils concurrent autoplist pytest # tests use nose and therefore don't work, see https://github.com/daler/gffutils/issues/211 +USE_PYTHON= distutils concurrent autoplist pytest + +TEST_ENV= ${MAKE_ENV} \ + PATH=${STAGEDIR}${PREFIX}/bin:${PATH} \ + PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR} NO_ARCH= yes +# 1 test (test_roundtrip) fails, see test_roundtrip + .include <bsd.port.mk> diff --git a/biology/py-gffutils/distinfo b/biology/py-gffutils/distinfo index 87aef9733a5d..e5a11a3fb3cf 100644 --- a/biology/py-gffutils/distinfo +++ b/biology/py-gffutils/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1678604359 -SHA256 (gffutils-0.11.1.tar.gz) = ca7bf814d600b389bb2d5c403dd279755118cb1476c19c6f7aecb8c51a84263c -SIZE (gffutils-0.11.1.tar.gz) = 1553140 +TIMESTAMP = 1718571181 +SHA256 (gffutils-0.13.tar.gz) = b0d52f35c014cc0330fb5c4e3c6fea127c90ccf4c5384a825cdb5c8ff330d4eb +SIZE (gffutils-0.13.tar.gz) = 1560489
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