From owner-freebsd-ports-bugs@freebsd.org Sat Nov 3 13:21:40 2018 Return-Path: Delivered-To: freebsd-ports-bugs@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id DCCDF10FDCBB for ; Sat, 3 Nov 2018 13:21:39 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id 65CDD827B6 for ; Sat, 3 Nov 2018 13:21:39 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: by mailman.ysv.freebsd.org (Postfix) id 2A33110FDCB8; Sat, 3 Nov 2018 13:21:39 +0000 (UTC) Delivered-To: ports-bugs@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 084D710FDCB7 for ; Sat, 3 Nov 2018 13:21:39 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mxrelay.ysv.freebsd.org (mxrelay.ysv.freebsd.org [IPv6:2001:1900:2254:206a::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) (Client CN "mxrelay.ysv.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 9C6F6827AE for ; Sat, 3 Nov 2018 13:21:38 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2001:1900:2254:206a::16:76]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.ysv.freebsd.org (Postfix) with ESMTPS id CB42669A6 for ; Sat, 3 Nov 2018 13:21:37 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org ([127.0.1.118]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id wA3DLbu4065950 for ; Sat, 3 Nov 2018 13:21:37 GMT (envelope-from bugzilla-noreply@freebsd.org) Received: (from www@localhost) by kenobi.freebsd.org (8.15.2/8.15.2/Submit) id wA3DLbT6065949 for ports-bugs@FreeBSD.org; Sat, 3 Nov 2018 13:21:37 GMT (envelope-from bugzilla-noreply@freebsd.org) X-Authentication-Warning: kenobi.freebsd.org: www set sender to bugzilla-noreply@freebsd.org using -f From: bugzilla-noreply@freebsd.org To: ports-bugs@FreeBSD.org Subject: [Bug 232930] biology/canu fails to build with GCC 8 Date: Sat, 03 Nov 2018 13:21:35 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Some People X-Bugzilla-Who: gerald@FreeBSD.org X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: jwb@freebsd.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter blocked flagtypes.name Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated MIME-Version: 1.0 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 03 Nov 2018 13:21:40 -0000 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D232930 Bug ID: 232930 Summary: biology/canu fails to build with GCC 8 Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Some People Priority: --- Component: Individual Port(s) Assignee: jwb@freebsd.org Reporter: gerald@FreeBSD.org Blocks: 231590 Flags: maintainer-feedback?(jwb@freebsd.org) Assignee: jwb@freebsd.org This port fails to build with GCC 8, blocking the update of the default version of GCC to that version. http://package22.nyi.freebsd.org/data/112amd64-default-PR231590/2018-10-29_= 06h48m05s/logs/errors/canu-1.7_2.log AS_UTL/stddev.H: In member function 'std::vector& genericStatistics::Nstatistics()': AS_UTL/stddev.H:346:12: error: invalid initialization of non-const referenc= e of type 'std::vector&' from an rvalue of type 'std::vector<= long unsigned int>*' return(&_Nstatistics); ~^~~~~~~~~~~~~~ gmake[1]: *** [Makefile:659: /wrkdirs/usr/ports/biology/canu/work/canu-1.7/src/usr/local/FreeBSD-amd64/o= bj/lib/libcanu.a/utgcns/libNDalign/NDalign.o] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/canu/work/canu-1.7/= src' *** Error code 1 Note: upstream released Canu v1.8 two weeks ago, which may address this bug? Referenced Bugs: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D231590 [Bug 231590] [exp-run] Update GCC_DEFAULT from 7 to 8 --=20 You are receiving this mail because: You are the assignee for the bug.=