Date: Mon, 29 Sep 2014 21:59:39 GMT From: pkg-fallout@FreeBSD.org To: h2+fbsdports@fsfe.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 10amd64-quarterly][biology/ugene] Failed for ugene-1.13.1 in checksum Message-ID: <201409292159.s8TLxdel018593@beefy2.isc.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: h2+fbsdports@fsfe.org Last committer: danfe@FreeBSD.org Ident: $FreeBSD: branches/2014Q2/biology/ugene/Makefile 347340 2014-03-07 07:39:20Z danfe $ Log URL: http://beefy2.isc.freebsd.org/data/10amd64-quarterly/2014-09-29_19h58m47s/logs/ugene-1.13.1.log Build URL: http://beefy2.isc.freebsd.org/build.html?mastername=10amd64-quarterly&build=2014-09-29_19h58m47s Log: ====>> Building biology/ugene build started at Mon Sep 29 21:59:35 UTC 2014 port directory: /usr/ports/biology/ugene building for: FreeBSD 10amd64-quarterly-job-01 10.0-RELEASE-p7 FreeBSD 10.0-RELEASE-p7 amd64 maintained by: h2+fbsdports@fsfe.org Makefile ident: $FreeBSD: branches/2014Q2/biology/ugene/Makefile 347340 2014-03-07 07:39:20Z danfe $ Poudriere version: 3.1-pre Host OSVERSION: 1100027 Jail OSVERSION: 1000510 ---Begin Environment--- OSVERSION=1000510 UNAME_v=FreeBSD 10.0-RELEASE-p7 UNAME_r=10.0-RELEASE-p7 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM=screen MASTERMNT=/usr/local/poudriere/data/.m/10amd64-quarterly/ref PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNAME=ugene-1.13.1 OLDPWD=/root PWD=/usr/local/poudriere/data/.m/10amd64-quarterly/ref/.p/pool MASTERNAME=10amd64-quarterly USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for ugene-1.13.1: DOCS=on: Install official UGENE documentation (PDF) ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-includes=/usr/local/include --with-extra-libs=/usr/local/lib --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ugene/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ugene/work HOME=/wrkdirs/usr/ports/biology/ugene/work TMPDIR="/tmp" QTDIR="/usr/local" QMAKE="/usr/local/bin/qmake-qt4" MOC="/usr/local/bin/moc-qt4" RCC="/usr/local/bin/rcc" UIC="/usr/local/bin/uic-qt4" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-$(ccver="$(c++ --version)"; case "$ccver" in *clang*) echo clang ;; *) echo g++ ;; esac)" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ugene/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ugene/work HOME=/wrkdirs/usr/ports/biology/ugene/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ugene/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ugene/work HOME=/wrkdirs/usr/ports/biology/ugene/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ugene/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ugene/work HOME=/wrkdirs/usr/ports/biology/ugene/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing -std=c++11" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444" --End MAKE_ENV-- --PLIST_SUB-- NOX64="@comment " OSREL=10.0 PREFIX=%D LOCALBASE=/usr/local PORTDOCS="" PORTEXAMPLES="" PORTDATA="" LIB32DIR=lib GTK2_VERSION="2.10.0" GTK3_VERSION="3.0.0" DOCSDIR="share/ugene/manuals" EXAMPLESDIR="share/examples/ugene" DATADIR="share/ugene" WWWDIR="www/ugene" ETCDIR="etc/ugene" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/ugene DOCSDIR=/usr/local/share/ugene/manuals EXAMPLESDIR=/usr/local/share/examples/ugene WWWDIR=/usr/local/www/ugene ETCDIR=/usr/local/etc/ugene --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes #WITH_PKGNG=devel # clean-restricted ran via poudriere.conf NO_RESTRICTED #NO_RESTRICTED=yes DISABLE_MAKE_JOBS=poudriere ---End make.conf--- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> ugene-1.13.1 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg ===> Installing existing package /packages/All/pkg-1.2.7_4.txz Installing pkg-1.2.7_4... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of ugene-1.13.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by ugene-1.13.1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by ugene-1.13.1 for building => SHA256 Checksum OK for ugene/ugene-1.13.1.tar.gz. => SHA256 Checksum mismatch for ugene/QueryDesigner_UserManual.pdf. => SHA256 Checksum mismatch for ugene/UniproUGENE_UserManual.pdf. => SHA256 Checksum mismatch for ugene/WorkflowDesigner_UserManual.pdf. ===> Refetch for 1 more times files: ugene/QueryDesigner_UserManual.pdf ugene/UniproUGENE_UserManual.pdf ugene/WorkflowDesigner_UserManual.pdf ===> License GPLv2 accepted by the user => QueryDesigner_UserManual.pdf doesn't seem to exist in /portdistfiles/ugene. => Attempting to fetch http://ugene.unipro.ru/downloads/QueryDesigner_UserManual.pdf fetch: http://ugene.unipro.ru/downloads/QueryDesigner_UserManual.pdf: size mismatch: expected 1306825, actual 824781 => Attempting to fetch http://distcache.FreeBSD.org/ports-distfiles/ugene/QueryDesigner_UserManual.pdf fetch: http://distcache.FreeBSD.org/ports-distfiles/ugene/QueryDesigner_UserManual.pdf: size mismatch: expected 1306825, actual 824781 => Couldn't fetch it - please try to retrieve this => port manually into /portdistfiles/ugene and try again. *** Error code 1 Stop. make[1]: stopped in /usr/ports/biology/ugene *** Error code 1 Stop. make: stopped in /usr/ports/biology/ugene
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