Date: Thu, 20 Aug 2009 09:17:20 -0300 (ART) From: Fernan Aguero <fernan@iib.unsam.edu.ar> To: FreeBSD-gnats-submit@FreeBSD.org Subject: ports/137991: update biology/fasta3 Message-ID: <20090820121721.12D8D20010E@sigma.iib.unsam.edu.ar> Resent-Message-ID: <200908201230.n7KCU5f0085383@freefall.freebsd.org>
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>Number: 137991 >Category: ports >Synopsis: update biology/fasta3 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Thu Aug 20 12:30:04 UTC 2009 >Closed-Date: >Last-Modified: >Originator: Fernan Aguero >Release: FreeBSD 6.4-RELEASE-p3 i386 >Organization: IIB-UNSAM >Environment: FreeBSD gama.iib.unsam.edu.ar 6.4-RELEASE-p3 FreeBSD 6.4-RELEASE-p3 #0: Wed Mar 18 20:56:28 ART 2009 fernan@gama.iib.unsam.edu.ar:/usr/obj/freebsd/freebsd-6.4/src/sys/GAMA i386 >Description: This version fixes some issues with translated searches (termination codons were sometimes interpreted as 'J') and with alignment encodings with the -m 9c option with fasty35(_t). >How-To-Repeat: >Fix: --- fasta3.diff begins here --- diff -ruN --exclude=CVS /usr/ports/biology/fasta3/Makefile /freebsd/ports-dev/ports/biology/fasta3/Makefile --- /usr/ports/biology/fasta3/Makefile 2009-06-12 18:01:34.000000000 -0300 +++ /freebsd/ports-dev/ports/biology/fasta3/Makefile 2009-08-20 08:47:54.000000000 -0300 @@ -7,7 +7,7 @@ # PORTNAME= fasta3 -PORTVERSION= 35.4.7 +PORTVERSION= 35.4.9 CATEGORIES= biology MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta3/ DISTNAME= fasta-${PORTVERSION} diff -ruN --exclude=CVS /usr/ports/biology/fasta3/distinfo /freebsd/ports-dev/ports/biology/fasta3/distinfo --- /usr/ports/biology/fasta3/distinfo 2009-06-12 18:01:34.000000000 -0300 +++ /freebsd/ports-dev/ports/biology/fasta3/distinfo 2009-08-20 08:48:58.000000000 -0300 @@ -1,3 +1,3 @@ -MD5 (fasta-35.4.7.tar.gz) = b5264743c0cbdf7f4d29de82b725f277 -SHA256 (fasta-35.4.7.tar.gz) = 02b34aee73b610c37c8cc7fc5cc06c045402d424df5ffa6309afb147bd4e6120 -SIZE (fasta-35.4.7.tar.gz) = 630897 +MD5 (fasta-35.4.9.tar.gz) = 6bf19b771f2c64287b7713864b9f0a69 +SHA256 (fasta-35.4.9.tar.gz) = 4beaed42557572a1c8e5480e93641af175fa43c545f75c4bf06db62dced6bd39 +SIZE (fasta-35.4.9.tar.gz) = 630748 --- fasta3.diff ends here --- >Release-Note: >Audit-Trail: >Unformatted:
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