Date: Sun, 18 Nov 2012 04:34:54 +0000 (UTC) From: TAKATSU Tomonari <tota@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r307527 - in head/math: . R-cran-MCMCpack Message-ID: <201211180434.qAI4YsgI051911@svn.freebsd.org>
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Author: tota Date: Sun Nov 18 04:34:53 2012 New Revision: 307527 URL: http://svnweb.freebsd.org/changeset/ports/307527 Log: - Add a new port: math/R-cran-MCMCpack This package contains functions to perform Bayesian inference using posterior simulation for a number of statistical models. Most simulation is done in compiled C++ written in the Scythe Statistical Library Version 1.0.3. All models return coda mcmc objects that can then be summarized using the coda package. MCMCpack also contains some useful utility functions, including some additional density functions and pseudo-random number generators for statistical distributions, a general purpose Metropolis sampling algorithm, and tools for visualization. WWW: http://cran.r-project.org/web/packages/MCMCpack/ Feature safe: yes Added: head/math/R-cran-MCMCpack/ head/math/R-cran-MCMCpack/Makefile (contents, props changed) head/math/R-cran-MCMCpack/distinfo (contents, props changed) head/math/R-cran-MCMCpack/pkg-descr (contents, props changed) Modified: head/math/Makefile Modified: head/math/Makefile ============================================================================== --- head/math/Makefile Sun Nov 18 04:26:33 2012 (r307526) +++ head/math/Makefile Sun Nov 18 04:34:53 2012 (r307527) @@ -8,6 +8,7 @@ SUBDIR += R SUBDIR += R-cran-Formula SUBDIR += R-cran-KFAS + SUBDIR += R-cran-MCMCpack SUBDIR += R-cran-RSvgDevice SUBDIR += R-cran-SuppDists SUBDIR += R-cran-Zelig Added: head/math/R-cran-MCMCpack/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/R-cran-MCMCpack/Makefile Sun Nov 18 04:34:53 2012 (r307527) @@ -0,0 +1,21 @@ +# Created by: TAKATSU Tomonari <tota@FreeBSD.org> +# $FreeBSD$ + +PORTNAME= MCMCpack +DISTVERSION= 1.2-4 +CATEGORIES= math +DISTNAME= ${PORTNAME}_${DISTVERSION} + +MAINTAINER= tota@FreeBSD.org +COMMENT= Markov chain Monte Carlo Package + +LICENSE= GPLv3 + +RUN_DEPENDS= R-cran-coda>0.11.3:${PORTSDIR}/math/R-cran-coda + +# Actually required 4.0 or later, but at least 4.2 in the FreeBSD ports tree +USE_GCC= 4.2+ +USE_R_MOD= yes +R_MOD_AUTOPLIST= yes + +.include <bsd.port.mk> Added: head/math/R-cran-MCMCpack/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/R-cran-MCMCpack/distinfo Sun Nov 18 04:34:53 2012 (r307527) @@ -0,0 +1,2 @@ +SHA256 (MCMCpack_1.2-4.tar.gz) = 5c9aea9329371ab5e8488ad29aff67fbb6a4eca7e4ad25802aed168bcc0b84ba +SIZE (MCMCpack_1.2-4.tar.gz) = 493078 Added: head/math/R-cran-MCMCpack/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/R-cran-MCMCpack/pkg-descr Sun Nov 18 04:34:53 2012 (r307527) @@ -0,0 +1,11 @@ +This package contains functions to perform Bayesian inference using +posterior simulation for a number of statistical models. Most +simulation is done in compiled C++ written in the Scythe Statistical +Library Version 1.0.2. All models return coda mcmc objects that can +then be summarized using the coda package. MCMCpack also contains +some useful utility functions, including some additional density +functions and pseudo-random number generators for statistical +distributions, a general purpose Metropolis sampling algorithm, and +tools for visualization. + +WWW: http://cran.r-project.org/web/packages/MCMCpack/
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