Date: Mon, 13 Nov 2000 18:07:08 +0200 From: johann@egenetics.com To: FreeBSD-gnats-submit@freebsd.org Subject: ports/22820: Port update: textproc/py-martel (MAINTAINER) Message-ID: <E13vM8S-00015J-00@fling.sanbi.ac.za>
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>Number: 22820 >Category: ports >Synopsis: Port update: textproc/py-martel (MAINTAINER) >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Mon Nov 13 08:10:00 PST 2000 >Closed-Date: >Last-Modified: >Originator: Johann Visagie >Release: FreeBSD 5.0-CURRENT i386 >Organization: Electric Genetics >Environment: >Description: - Update port textproc/py-martel to 0.35 - This version now depends on Python 2.0, but no longer depends on PyXML (it uses the xml package in Python 2.0's standard library.) >How-To-Repeat: >Fix: diff -ruN py-martel.bak/Makefile py-martel/Makefile --- py-martel.bak/Makefile Mon Nov 13 18:03:29 2000 +++ py-martel/Makefile Mon Nov 13 17:56:23 2000 @@ -6,8 +6,7 @@ # PORTNAME= martel -PORTVERSION= 0.3 -PORTREVISION= 1 +PORTVERSION= 0.35 CATEGORIES= textproc biology python MASTER_SITES= http://www.biopython.org/~dalke/Martel/ PKGNAMEPREFIX= py- @@ -15,11 +14,9 @@ MAINTAINER= johann@egenetics.com -RUN_DEPENDS= ${PYXML} \ - ${PYTHON_SITELIBDIR}/TextTools/__init__.py:${PORTSDIR}/textproc/py-mxTextTools +RUN_DEPENDS= ${PYTHON_SITELIBDIR}/TextTools/__init__.py:${PORTSDIR}/textproc/py-mxTextTools -WRKSRC= ${WRKDIR}/${DISTNAME}/Martel -USE_PYTHON= yes +PYTHON_VERSION= python2.0 NO_BUILD= yes MARTEL_DIR= ${PYTHON_SITELIBDIR}/Martel diff -ruN py-martel.bak/distinfo py-martel/distinfo --- py-martel.bak/distinfo Mon Nov 13 18:03:29 2000 +++ py-martel/distinfo Mon Nov 13 17:35:54 2000 @@ -1 +1 @@ -MD5 (Martel-0.3.tar.gz) = 4fc36181c39b564a3dbbacaab59b7ab8 +MD5 (Martel-0.35.tar.gz) = 8743c59c37132ecfe6a99c91f774409e diff -ruN py-martel.bak/pkg-plist py-martel/pkg-plist --- py-martel.bak/pkg-plist Mon Nov 13 18:03:29 2000 +++ py-martel/pkg-plist Mon Nov 13 17:54:58 2000 @@ -4,6 +4,9 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/Generate.py lib/%%PYTHON_VERSION%%/site-packages/Martel/Generate.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/Generate.pyo +lib/%%PYTHON_VERSION%%/site-packages/Martel/Iterator.py +lib/%%PYTHON_VERSION%%/site-packages/Martel/Iterator.pyc +lib/%%PYTHON_VERSION%%/site-packages/Martel/Iterator.pyo lib/%%PYTHON_VERSION%%/site-packages/Martel/Parser.py lib/%%PYTHON_VERSION%%/site-packages/Martel/Parser.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/Parser.pyo @@ -41,6 +44,9 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/blastall_2_0_10.py lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/blastall_2_0_10.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/blastall_2_0_10.pyo +lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/prosite16.py +lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/prosite16.pyc +lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/prosite16.pyo lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/swissprot38.py lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/swissprot38.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/swissprot38.pyo @@ -65,6 +71,9 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Generate.py lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Generate.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Generate.pyo +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Iterator.py +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Iterator.pyc +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Iterator.pyo lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_MDL_10_1996.py lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_MDL_10_1996.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_MDL_10_1996.pyo @@ -77,6 +86,9 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_ParseRecords.py lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_ParseRecords.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_ParseRecords.pyo +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Parser.py +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Parser.pyc +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Parser.pyo lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader.py lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader.pyo @@ -89,13 +101,12 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_optimize.py lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_optimize.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_optimize.pyo +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_prosite16.py +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_prosite16.pyc +lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_prosite16.pyo lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_swissprot38.py lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_swissprot38.pyc lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_swissprot38.pyo -share/doc/martel/HISTORY -share/doc/martel/README -share/doc/martel/tech_description.txt -share/doc/martel/writing_a_format.txt share/examples/martel/README share/examples/martel/pdb1plm.ent share/examples/martel/sample.swissprot @@ -103,8 +114,8 @@ share/examples/martel/test.mol share/examples/martel/toxml.py @dirrm share/examples/martel -@dirrm share/doc/martel @dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel/test @dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel/formats @dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel/examples @dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel +@unexec rm -rf %D/share/doc/martel 2>/dev/null || true >Release-Note: >Audit-Trail: >Unformatted: To Unsubscribe: send mail to majordomo@FreeBSD.org with "unsubscribe freebsd-ports" in the body of the message
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