Date: Wed, 13 Oct 2021 16:04:51 GMT From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 06e26353b27a - main - biology/py-deeptoolsintervals: Python interface for deepTools interval trees Message-ID: <202110131604.19DG4pDf007622@gitrepo.freebsd.org>
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The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=06e26353b27ad89d8b30d26865a330d4feeb58d9 commit 06e26353b27ad89d8b30d26865a330d4feeb58d9 Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2021-10-13 16:01:52 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2021-10-13 16:02:13 +0000 biology/py-deeptoolsintervals: Python interface for deepTools interval trees Deeptools_intervals is an interval tree backend designed to interface with deepTools, supporting metadata associated with each interval. --- biology/py-deeptoolsintervals/Makefile | 16 ++++++++++++++++ biology/py-deeptoolsintervals/distinfo | 3 +++ biology/py-deeptoolsintervals/files/patch-setup.py | 11 +++++++++++ biology/py-deeptoolsintervals/pkg-descr | 4 ++++ 4 files changed, 34 insertions(+) diff --git a/biology/py-deeptoolsintervals/Makefile b/biology/py-deeptoolsintervals/Makefile new file mode 100644 index 000000000000..e6ebc1066803 --- /dev/null +++ b/biology/py-deeptoolsintervals/Makefile @@ -0,0 +1,16 @@ +PORTNAME= deeptoolsintervals +DISTVERSION= 0.1.9 +CATEGORIES= biology python +MASTER_SITES= CHEESESHOP +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= jwb@FreeBSD.org +COMMENT= Python interface for deepTools interval trees + +LICENSE= MIT +LICENSE_FILE= ${WRKSRC}/LICENSE + +USES= python +USE_PYTHON= autoplist distutils + +.include <bsd.port.mk> diff --git a/biology/py-deeptoolsintervals/distinfo b/biology/py-deeptoolsintervals/distinfo new file mode 100644 index 000000000000..9933b91e8868 --- /dev/null +++ b/biology/py-deeptoolsintervals/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1617289403 +SHA256 (deeptoolsintervals-0.1.9.tar.gz) = 7d94c36fd2b6f10d8b99e536d2672e8228971f1fc810497d33527bba2c40d4f6 +SIZE (deeptoolsintervals-0.1.9.tar.gz) = 41123 diff --git a/biology/py-deeptoolsintervals/files/patch-setup.py b/biology/py-deeptoolsintervals/files/patch-setup.py new file mode 100644 index 000000000000..d8d41de78a6e --- /dev/null +++ b/biology/py-deeptoolsintervals/files/patch-setup.py @@ -0,0 +1,11 @@ +--- setup.py.orig 2021-10-13 15:57:11 UTC ++++ setup.py +@@ -32,7 +32,7 @@ setup(name='deeptoolsintervals', + author_email="ryan@ie-freiburg.mpg.de", + url="https://github.com/deeptools/deeptools_intervals", + keywords=["bioinformatics", "GTF"], +- classifier=["Development Status :: 5 - Production/Stable", ++ classifiers=["Development Status :: 5 - Production/Stable", + "Environment :: Console", + "License :: OSI Approved :: MIT License", + "Intended Audience :: Developers", diff --git a/biology/py-deeptoolsintervals/pkg-descr b/biology/py-deeptoolsintervals/pkg-descr new file mode 100644 index 000000000000..368b6da1a905 --- /dev/null +++ b/biology/py-deeptoolsintervals/pkg-descr @@ -0,0 +1,4 @@ +Deeptools_intervals is an interval tree backend designed to interface +with deepTools, supporting metadata associated with each interval. + +WWW: https://github.com/deeptools/deeptools_intervals
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