Date: Sun, 28 Jan 2018 01:05:33 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-arm64-default][science/avogadro] Failed for avogadro-1.1.1_11 in package Message-ID: <201801280105.w0S15XD1021597@thunderx1.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: kde@FreeBSD.org Last committer: jbeich@FreeBSD.org Ident: $FreeBSD: head/science/avogadro/Makefile 459315 2018-01-18 04:11:02Z jbeich $ Log URL: http://thunderx1.nyi.freebsd.org/data/head-arm64-default/p459726_s328273/logs/avogadro-1.1.1_11.log Build URL: http://thunderx1.nyi.freebsd.org/build.html?mastername=head-arm64-default&build=p459726_s328273 Log: =>> Building science/avogadro build started at Sat Jan 27 22:49:21 UTC 2018 port directory: /usr/ports/science/avogadro package name: avogadro-1.1.1_11 building for: FreeBSD head-arm64-default-job-05 12.0-CURRENT FreeBSD 12.0-CURRENT 1200056 arm64 maintained by: kde@FreeBSD.org Makefile ident: $FreeBSD: head/science/avogadro/Makefile 459315 2018-01-18 04:11:02Z jbeich $ Poudriere version: 3.2.4 Host OSVERSION: 1200054 Jail OSVERSION: 1200056 Job Id: 05 !!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh OSVERSION=1200056 UNAME_v=FreeBSD 12.0-CURRENT 1200056 UNAME_r=12.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/head-arm64-default/ref PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk OLDPWD=/usr/local/poudriere/data/.m/head-arm64-default/ref/.p P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS PWD=/usr/local/poudriere/data/.m/head-arm64-default/ref/.p/pool MASTERNAME=head-arm64-default SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root P_PYTHON_MAJOR_VER=2 POUDRIERE_VERSION=3.2.4 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for avogadro-1.1.1_11: PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- kde@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-includes=/usr/local/include --with-extra-libs=/usr/local/lib --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- QT_SELECT=qt4 QMAKEMODULES="/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/mkspecs/modules:/usr/local/share/qt4/mkspecs/modules" PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadro/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadro/work HOME=/wrkdirs/usr/ports/science/avogadro/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/avogadro/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh QTDIR="/usr/local/lib/qt4" QMAKE="/usr/local/lib/qt4/bin/qmake" MOC="/usr/local/lib/qt4/bin/moc" RCC="/usr/local/lib/qt4/bin/rcc" UIC="/usr/local/lib/qt4/bin/uic" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-$(ccver="$(c++ --version)"; case "$ccver" in *clang*) echo clang ;; *) echo g++ ;; esac)" --End CONFIGURE_ENV-- --MAKE_ENV-- QT_SELECT=qt4 QMAKEMODULES="/wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.1/mkspecs/modules:/usr/local/share/qt4/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/avogadro/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/avogadro/work HOME=/wrkdirs/usr/ports/science/avogadro/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/avogadro/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/avogadro/work/stage PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -idirafter /usr/local/include/eigen2 -idirafter /usr/local/include -I/usr/local/include -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTAL L_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" PYTHON="" NO_PYTHON="@comment " QT_BINDIR="lib/qt4/bin" QT_INCDIR="include/qt4" QT_LIBDIR="lib/qt4" QT_ARCHDIR="lib/qt4" QT_PLUGINDIR="lib/qt4/plugins" QT_LIBEXECDIR="libexec/qt4" QT_IMPORTDIR="lib/qt4/imports" QT_QMLDIR="lib/qt4/qml" QT_DATADIR="share/qt4" QT_DOCDIR="share/doc/qt4" QT_L10NDIR="share/qt4/translations" QT_EXAMPLEDIR="share/examples/qt4" QT_TESTDIR="share/qt4/tests" QT_MKSPECDIR="share/qt4/mkspecs" QT_QTCHOOSERDIR="etc/xdg/qtchooser" CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd12 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/avogadro" EXAMPLESDIR="share/examples/avogadro" DATADIR="share/avogadro" WWWDIR="www/avogadro" ETCDIR="etc/avogadro" --End PLIST_SUB-- --SUB_LIST-- PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadro DOCSDIR=/usr/local/share/doc/avogadro EXAMPLESDIR=/usr/local/share/examples/avogadro WWWDIR=/usr/local/www/avogadro ETCDIR=/usr/local/etc/avogadro --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### ARCH=aarch64 CONFIGURE_MAX_CMD_LEN=262144 OPSYS=FreeBSD OSREL=12.0 OSVERSION=1200056 PYTHONBASE=/usr/local UID=0 _OSRELEASE=12.0-CURRENT #### Misc Poudriere #### GID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2+ accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> avogadro-1.1.1_11 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.4.txz [head-arm64-default-job-05] Installing pkg-1.10.4... [head-arm64-default-job-05] Extracting pkg-1.10.4: .......... done ===> avogadro-1.1.1_11 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of avogadro-1.1.1_11 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by avogadro-1.1.1_11 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by avogadro-1.1.1_11 for building => SHA256 Checksum OK for avogadro-1.1.1.tar.bz2. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by avogadro-1.1.1_11 for building ===> Extracting for avogadro-1.1.1_11 => SHA256 Checksum OK for avogadro-1.1.1.tar.bz2. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for avogadro-1.1.1_11 ===> Applying FreeBSD patches for avogadro-1.1.1_11 =========================================================================== =======================<phase: build-depends >============================ ===> avogadro-1.1.1_11 depends on package: py27-numpy>0 - not found ===> Installing existing package /packages/All/py27-numpy-1.13.3_1,1.txz [head-arm64-default-job-05] Installing py27-numpy-1.13.3_1,1... [head-arm64-default-job-05] `-- Installing blas-3.5.0_3... [head-arm64-default-job-05] | `-- Installing gcc6-6.4.0_3... [head-arm64-default-job-05] | | `-- Installing binutils-2.28,1... [head-arm64-default-job-05] | | `-- Installing gettext-runtime-0.19.8.1_1... [head-arm64-default-job-05] | | | `-- Installing indexinfo-0.3.1... [head-arm64-default-job-05] | | | `-- Extracting indexinfo-0.3.1: .... done [head-arm64-default-job-05] | | `-- Extracting gettext-runtime-0.19.8.1_1: .......... done [head-arm64-default-job-05] | | `-- Extracting binutils-2.28,1: .......... done [head-arm64-default-job-05] | | `-- Installing gmp-6.1.2... [head-arm64-default-job-05] | | `-- Extracting gmp-6.1.2: .......... done [head-arm64-default-job-05] | | `-- Installing mpc-1.0.3... [head-arm64-default-job-05] | | `-- Installing mpfr-3.1.6... [head-arm64-default-job-05] | | `-- Extracting mpfr-3.1.6: .......... done [head-arm64-default-job-05] | | `-- Extracting mpc-1.0.3: ...... done [head-arm64-default-job-05] | `-- Extracting gcc6-6.4.0_3: .......... done [head-arm64-default-job-05] `-- Extracting blas-3.5.0_3: ....... done [head-arm64-default-job-05] `-- Installing cblas-1.0_7... [head-arm64-default-job-05] `-- Extracting cblas-1.0_7: ......... done [head-arm64-default-job-05] `-- Installing lapack-3.5.0_3... [head-arm64-default-job-05] `-- Extracting lapack-3.5.0_3: .......... done [head-arm64-default-job-05] `-- Installing py27-setuptools-38.2.5... [head-arm64-default-job-05] | `-- Installing python27-2.7.14_1... [head-arm64-default-job-05] | | `-- Installing libffi-3.2.1_2... [head-arm64-default-job-05] | | `-- Extracting libffi-3.2.1_2: .......... done [head-arm64-default-job-05] | | `-- Installing readline-7.0.3_1... <snip> -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_pl.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_pt.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_pt_BR.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_ru.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_sk.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_sl.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_sq.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_sr.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_sv.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_tr.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_ug.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_uk.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_vi.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_zh_CN.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/libavogadro_zh_TW.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/AvogadroTargets.cmake -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/AvogadroTargets-release.cmake -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/labelengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/labelengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/wireengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/wireengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/hbondengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/hbondengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/forceengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/forceengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/sphereengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/sphereengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/stickengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/stickengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/ribbonengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/ribbonengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/cartoonengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/cartoonengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/ringengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/ringengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/polygonengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/polygonengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/surfaceengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/surfaceengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/axesengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/axesengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/dipoleengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/dipoleengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/simplewireengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/simplewireengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/qtaimengine.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/engines/qtaimengine.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/drawtool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/drawtool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/bondcentrictool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/bondcentrictool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/clickmeasuretool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/clickmeasuretool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/selectrotatetool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/selectrotatetool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/autoopttool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/autoopttool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/manipulatetool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/manipulatetool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/autorotatetool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/autorotatetool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/aligntool.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/tools/aligntool.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/propextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/propextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/cartesianextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/cartesianextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/molecularpropextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/molecularpropextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/forcefieldextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/forcefieldextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/hydrogensextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/hydrogensextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/invertchiralextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/invertchiralextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/selectextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/selectextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/insertfragmentextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/insertfragmentextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/insertpeptideextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/insertpeptideextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/insertdnaextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/insertdnaextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/h2methylextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/h2methylextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/animationextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/animationextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/povrayextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/povrayextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/fileimportextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/fileimportextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/supercellextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/supercellextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/networkfetchextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/networkfetchextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/gl2psextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/gl2psextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/crystallographyextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/crystallographyextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/vibrationextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/vibrationextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/spectraextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/spectraextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/surfaceextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/surfaceextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/orbitalextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/orbitalextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/libavogadro_OpenQube.so.0.1.0 -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/libavogadro_OpenQube.so.0 -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/libavogadro_OpenQube.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/libavogadro_OpenQube.so.0.1.0" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/swcntbuilderextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/swcntbuilderextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/qtaimextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/qtaimextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/inputfileextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/inputfileextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/gamessextension.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/gamessextension.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/residuecolor.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/residuecolor.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/atomindexcolor.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/atomindexcolor.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/chargecolor.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/chargecolor.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/distancecolor.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/distancecolor.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/customcolor.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/customcolor.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/smartscolor.so -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/colors/smartscolor.so" to "/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/bin/avogadro -- Set runtime path of "/wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/bin/avogadro" to "$ORIGIN/../lib:/usr/local/lib:/usr/local/lib/qt4" -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_af.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ar.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_bg.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ca.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ca@valencia.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_cs.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_da.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_de.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_el.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_en_AU.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_en_CA.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_en_GB.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_es.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_et.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_eu.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_fi.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_fr.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_gl.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_he.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_hi.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_hr.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_hu.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_id.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_it.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ja.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_kn.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ko.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ms.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_nb.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_nl.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_oc.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_pl.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_pt.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_pt_BR.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ru.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_sk.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_sl.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_sq.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_sr.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_sv.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ta.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_th.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_tr.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_ug.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_uk.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_vi.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_zh_CN.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/avogadro/i18n/avogadro_zh_TW.qm -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/applications/avogadro.desktop -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/pixmaps/avogadro-icon.png -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/man/man1/avogadro.1 -- Installing: /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/man/man1/avopkg.1 ====> Compressing man pages (compress-man) =========================================================================== =======================<phase: package >============================ ===> Building package for avogadro-1.1.1_11 pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/include/avogadro/pythonerror.h:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/include/avogadro/pythoninterpreter.h:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/include/avogadro/pythonscript.h:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/avogadro/1_1/extensions/pythonterminal.so:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/lib/python2.7/site-packages/Avogadro.so:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/libavogadro/engineScripts/wireframe.py:No such file or directory pkg-static: Unable to access file /wrkdirs/usr/ports/science/avogadro/work/stage/usr/local/share/libavogadro/extensionScripts/example.py:No such file or directory *** Error code 1 Stop. make: stopped in /usr/ports/science/avogadro
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