Date: Tue, 28 Apr 2020 01:30:24 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - 121armv7-quarterly][devel/R-cran-ModelMetrics] Failed for R-cran-ModelMetrics-1.2.2.1 in stage Message-ID: <202004280130.03S1UO5O065913@beefy13.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: tota@FreeBSD.org Last committer: tota@FreeBSD.org Ident: $FreeBSD: branches/2020Q2/devel/R-cran-ModelMetrics/Makefile 523184 2020-01-15 22:15:17Z tota $ Log URL: http://beefy13.nyi.freebsd.org/data/121armv7-quarterly/533224/logs/R-cran-ModelMetrics-1.2.2.1.log Build URL: http://beefy13.nyi.freebsd.org/build.html?mastername=121armv7-quarterly&build=533224 Log: =>> Building devel/R-cran-ModelMetrics build started at Tue Apr 28 01:28:51 UTC 2020 port directory: /usr/ports/devel/R-cran-ModelMetrics package name: R-cran-ModelMetrics-1.2.2.1 building for: FreeBSD 121armv7-quarterly-job-06 12.1-RELEASE-p4 FreeBSD 12.1-RELEASE-p4 1201000 arm maintained by: tota@FreeBSD.org Makefile ident: $FreeBSD: branches/2020Q2/devel/R-cran-ModelMetrics/Makefile 523184 2020-01-15 22:15:17Z tota $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300076 Jail OSVERSION: 1201000 Job Id: 06 ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv7 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1201000 UNAME_v=FreeBSD 12.1-RELEASE-p4 1201000 UNAME_r=12.1-RELEASE-p4 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/121armv7-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/121armv7-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=121armv7-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/121armv7-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- tota@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work HOME=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work HOME=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fstack-p rotector-strong -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/ModelMetrics OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/ModelMetrics" EXAMPLESDIR="share/examples/ModelMetrics" DATADIR="share/ModelMetrics" WWWDIR="www/ModelMetrics" ETCDIR="etc/ModelMetrics" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/ModelMetrics DOCSDIR=/usr/local/share/doc/ModelMetrics EXAMPLESDIR=/usr/local/share/examples/ModelMetrics WWWDIR=/usr/local/www/ModelMetrics ETCDIR=/usr/local/etc/ModelMetrics --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv7 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # 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It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: armv7-unknown-freebsd12.1-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: armv7-unknown-freebsd12.1-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: armv7-unknown-freebsd12.1-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=12.1-RELEASE-p4 OSREL=12.1 OSVERSION=1201000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2+ accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> R-cran-ModelMetrics-1.2.2.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.13.2.txz [121armv7-quarterly-job-06] Installing pkg-1.13.2... [121armv7-quarterly-job-06] Extracting pkg-1.13.2: .......... done ===> R-cran-ModelMetrics-1.2.2.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-ModelMetrics-1.2.2.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-ModelMetrics-1.2.2.1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-ModelMetrics-1.2.2.1 for building => SHA256 Checksum OK for ModelMetrics_1.2.2.1.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-ModelMetrics-1.2.2.1 for building ===> Extracting for R-cran-ModelMetrics-1.2.2.1 => SHA256 Checksum OK for ModelMetrics_1.2.2.1.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ <snip> [121armv7-quarterly-job-06] | | `-- Extracting libXt-1.2.0,1: .......... done [121armv7-quarterly-job-06] | `-- Extracting libXmu-1.1.3,1: .......... done [121armv7-quarterly-job-06] | `-- Installing pango-1.42.4_3... [121armv7-quarterly-job-06] | | `-- Installing encodings-1.0.5,1... [121armv7-quarterly-job-06] | | `-- Extracting encodings-1.0.5,1: .......... done [121armv7-quarterly-job-06] | | `-- Installing fribidi-0.19.7... [121armv7-quarterly-job-06] | | `-- Extracting fribidi-0.19.7: .......... done [121armv7-quarterly-job-06] | | `-- Installing harfbuzz-2.6.4... [121armv7-quarterly-job-06] | | `-- Installing graphite2-1.3.14... [121armv7-quarterly-job-06] | | `-- Extracting graphite2-1.3.14: .......... done [121armv7-quarterly-job-06] | | `-- Extracting harfbuzz-2.6.4: .......... done [121armv7-quarterly-job-06] | | `-- Installing libXft-2.3.3... [121armv7-quarterly-job-06] | | `-- Extracting libXft-2.3.3: .......... done [121armv7-quarterly-job-06] | | `-- Installing xorg-fonts-truetype-7.7_1... [121armv7-quarterly-job-06] | | `-- Installing dejavu-2.37_1... [121armv7-quarterly-job-06] | | | `-- Installing mkfontscale-1.2.1... [121armv7-quarterly-job-06] | | | `-- Installing libfontenc-1.1.4... [121armv7-quarterly-job-06] | | | `-- Extracting libfontenc-1.1.4: ......... done [121armv7-quarterly-job-06] | | | `-- Extracting mkfontscale-1.2.1: ....... done [121armv7-quarterly-job-06] | | `-- Extracting dejavu-2.37_1: .......... done [121armv7-quarterly-job-06] | | `-- Installing font-bh-ttf-1.0.3_4... [121armv7-quarterly-job-06] | | `-- Extracting font-bh-ttf-1.0.3_4: .......... done [121armv7-quarterly-job-06] | | `-- Installing font-misc-ethiopic-1.0.3_4... [121armv7-quarterly-job-06] | | `-- Extracting font-misc-ethiopic-1.0.3_4: ... done [121armv7-quarterly-job-06] | | `-- Installing font-misc-meltho-1.0.3_4... [121armv7-quarterly-job-06] | | `-- Extracting font-misc-meltho-1.0.3_4: .......... done [121armv7-quarterly-job-06] | `-- Extracting pango-1.42.4_3: .......... done [121armv7-quarterly-job-06] | `-- Installing tcl86-8.6.10... [121armv7-quarterly-job-06] | `-- Extracting tcl86-8.6.10: .......... done [121armv7-quarterly-job-06] | `-- Installing tk86-8.6.10_1... [121armv7-quarterly-job-06] | `-- Extracting tk86-8.6.10_1: .......... done [121armv7-quarterly-job-06] `-- Extracting R-3.6.3_1: .......... done [121armv7-quarterly-job-06] Extracting R-cran-Rcpp-1.0.3: .......... done ===== Message from freetype2-2.10.1: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/site/index.html, if documentation was installed). ===== Message from python37-3.7.7: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 ===== Message from ca_root_nss-3.51.1: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===== Message from gcc9-9.3.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc9 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from trousers-0.3.14_2: -- To run tcsd automatically, add the following line to /etc/rc.conf: tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. If you want to use tcsd with software TPM emulator, use the following configuration in /etc/rc.conf: tcsd_enable="YES" tcsd_mode="emulator" tpmd_enable="YES" To use TPM, add your_account to '_tss' group like following: # pw groupmod _tss -m your_account ===== Message from ghostscript9-agpl-base-9.52_1: -- This package installs a script named dvipdf that depends on dvips. If you want to use this script you need to install print/tex-dvipsk. ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===> R-cran-ModelMetrics-1.2.2.1 depends on package: R-cran-Rcpp>0 - found ===> Returning to build of R-cran-ModelMetrics-1.2.2.1 ===> R-cran-ModelMetrics-1.2.2.1 depends on package: R-cran-data.table>0 - not found ===> Installing existing package /packages/All/R-cran-data.table-1.12.8_1.txz [121armv7-quarterly-job-06] Installing R-cran-data.table-1.12.8_1... [121armv7-quarterly-job-06] Extracting R-cran-data.table-1.12.8_1: .......... done ===> R-cran-ModelMetrics-1.2.2.1 depends on package: R-cran-data.table>0 - found ===> Returning to build of R-cran-ModelMetrics-1.2.2.1 ===> R-cran-ModelMetrics-1.2.2.1 depends on file: /usr/local/bin/R - found ===> R-cran-ModelMetrics-1.2.2.1 depends on executable: gfortran9 - found ===> R-cran-ModelMetrics-1.2.2.1 depends on file: /usr/local/bin/as - found =========================================================================== =======================<phase: lib-depends >============================ =========================================================================== =======================<phase: configure >============================ ===> Configuring for R-cran-ModelMetrics-1.2.2.1 =========================================================================== =======================<phase: build >============================ =========================================================================== =======================<phase: run-depends >============================ ===> R-cran-ModelMetrics-1.2.2.1 depends on package: R-cran-Rcpp>0 - found ===> R-cran-ModelMetrics-1.2.2.1 depends on package: R-cran-data.table>0 - found ===> R-cran-ModelMetrics-1.2.2.1 depends on file: /usr/local/bin/R - found ===> R-cran-ModelMetrics-1.2.2.1 depends on executable: gfortran9 - found =========================================================================== =======================<phase: stage >============================ ===> Staging for R-cran-ModelMetrics-1.2.2.1 ===> Generating temporary packing list * installing *source* package 'ModelMetrics' ... ** package 'ModelMetrics' successfully unpacked and MD5 sums checked ** using staged installation ** libs gmake[1]: Entering directory '/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work/ModelMetrics/src' /nxb-bin/usr/bin/c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/library/Rcpp/include" -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c RcppExports.cpp -o RcppExports.o /nxb-bin/usr/bin/c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/library/Rcpp/include" -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c auc_.cpp -o auc_.o auc_.cpp:2:10: fatal error: 'omp.h' file not found #include <omp.h> ^~~~~~~ 1 error generated. gmake[1]: *** [/usr/local/lib/R/etc/Makeconf:175: auc_.o] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work/ModelMetrics/src' ERROR: compilation failed for package 'ModelMetrics' * removing '/wrkdirs/usr/ports/devel/R-cran-ModelMetrics/work/stage/usr/local/lib/R/library/ModelMetrics' *** Error code 1 Stop. make: stopped in /usr/ports/devel/R-cran-ModelMetrics
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