From nobody Fri Jan 7 08:34:54 2022 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 09BEF193A347; Fri, 7 Jan 2022 08:34:57 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4JVc3M3hSHz4rNy; Fri, 7 Jan 2022 08:34:55 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id ABC83C0; Fri, 7 Jan 2022 08:34:54 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.16.1/8.16.1) with ESMTP id 2078YswB034523; Fri, 7 Jan 2022 08:34:54 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 2078Ys5f034522; Fri, 7 Jan 2022 08:34:54 GMT (envelope-from git) Date: Fri, 7 Jan 2022 08:34:54 GMT Message-Id: <202201070834.2078Ys5f034522@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 4510216d0588 - main - science/PETSc: Update 3.14.1 -> 3.16.3 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 4510216d058875e4dad3fb0843ca7b16465c8209 Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1641544495; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=iLupXk8H+xyBVbDIqq12g2KUkmf5Acf5ZK/cwneoP2w=; b=g11y+Rl395QuKalUWv5va5KB8Uc2aWa/GUC6j24WVt6w32jhk2dspKHjsZoYxExo7aDqzI gOdXpbxIleIT8BaDFMETDsADuMsM32PBoTLvL97B1rqSOQ+SeGME5qm/ft99Iee03y5LY/ rjZiIqa6gStrph+O0s7E9P6fID/aBE3oG7CMRFvbVW8FK6uviVUoEXt+JYb0O9rKbmyeOO QkybHmrCMYRUcjZtUFrDQWXUb2/QiSd79ZJnqUlIOw+h6iZzJwnbp2b+xEJRnOSeSKPTu2 w4bStFJDf17ilH+QIhu/Wx54TBXhbIDpWYyQ+3bzETljGI99ejrNxkyHNZ180w== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1641544495; a=rsa-sha256; cv=none; b=cyaxuXJk1sxMj3atLZy1alE1C04EoeEWw5zjfHiv26ciknmVmRRBzq9vJ2qiF1xTJ++oaM vPpxbpA4/W0w0M2Enyu3oHpiHZhAVTF3xpWM+29rYsNSsnb5pSMQWIocopy5E3jkfhdFcV FF8OpRcnMqAwp5UP6+9y9By1+jwckTf0f8bD0VQJnpyDIQUbfvqwxnNJii8C387l1GmzdJ 6qq+idQvvgtT5nJ6wk0tKEgPBtqdrDYGRGjQd2GYStwRE2GfmhBpt8BZbfeWykC9omaf8s VA/rI8AMPW0lronRN5Y21SBdQDFn5gjru8X22xEwj4DxMFi0PWg0A7MltsqB4A== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=4510216d058875e4dad3fb0843ca7b16465c8209 commit 4510216d058875e4dad3fb0843ca7b16465c8209 Author: Yuri Victorovich AuthorDate: 2022-01-07 08:34:02 +0000 Commit: Yuri Victorovich CommitDate: 2022-01-07 08:34:46 +0000 science/PETSc: Update 3.14.1 -> 3.16.3 Reported by: portscout --- math/deal.ii/Makefile | 1 + math/petiga/Makefile | 1 + math/py-petsc4py/Makefile | 2 +- math/sundials/Makefile | 1 + science/PETSc/Makefile | 2 +- science/PETSc/distinfo | 6 +++--- science/PETSc/pkg-plist | 40 ++++++++++++++++++++++++++++++++++------ science/code_saturne/Makefile | 1 + 8 files changed, 43 insertions(+), 11 deletions(-) diff --git a/math/deal.ii/Makefile b/math/deal.ii/Makefile index acb952b00f85..86b31c0d69b5 100644 --- a/math/deal.ii/Makefile +++ b/math/deal.ii/Makefile @@ -1,6 +1,7 @@ PORTNAME= deal.II DISTVERSIONPREFIX= v DISTVERSION= 9.3.2 +PORTREVISION= 1 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org diff --git a/math/petiga/Makefile b/math/petiga/Makefile index 52eb13375003..2abea02450cb 100644 --- a/math/petiga/Makefile +++ b/math/petiga/Makefile @@ -1,5 +1,6 @@ PORTNAME= petiga DISTVERSION= g20210307 +PORTREVISION= 1 CATEGORIES= math python MASTER_SITES= https://bitbucket.org/${BB_ACCOUNT}/${BB_PROJECT}/get/${BB_COMMIT}.tar.gz?dummy=/ diff --git a/math/py-petsc4py/Makefile b/math/py-petsc4py/Makefile index e39761556cdf..ad14d56dd0ec 100644 --- a/math/py-petsc4py/Makefile +++ b/math/py-petsc4py/Makefile @@ -1,6 +1,6 @@ PORTNAME= petsc4py DISTVERSION= 3.10.0 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= math python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/math/sundials/Makefile b/math/sundials/Makefile index 25ec0a678494..68fa68b80cbf 100644 --- a/math/sundials/Makefile +++ b/math/sundials/Makefile @@ -1,5 +1,6 @@ PORTNAME= sundials DISTVERSION= 5.7.0 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= https://github.com/LLNL/sundials/releases/download/v${DISTVERSION}/ diff --git a/science/PETSc/Makefile b/science/PETSc/Makefile index b662e5cf7ffe..747748b1ab59 100644 --- a/science/PETSc/Makefile +++ b/science/PETSc/Makefile @@ -1,7 +1,7 @@ # Created by: Thierry Thomas PORTNAME= PETSc -PORTVERSION= 3.14.1 +DISTVERSION= 3.16.3 CATEGORIES= science devel MASTER_SITES= https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/ DISTNAME= ${PORTNAME:tl}-${DISTVERSION} diff --git a/science/PETSc/distinfo b/science/PETSc/distinfo index b8e6e5490c5d..be295195bc5a 100644 --- a/science/PETSc/distinfo +++ b/science/PETSc/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1606837215 -SHA256 (petsc-3.14.1.tar.gz) = dde246d97ca77e7e4165ff3c74e5517a2f08316cd8cb6d2c4e172743c1836ef8 -SIZE (petsc-3.14.1.tar.gz) = 37888585 +TIMESTAMP = 1641532277 +SHA256 (petsc-3.16.3.tar.gz) = eff44c7e7f12991dc7d2b627c477807a215ce16c2ce8a1c78aa8237ddacf6ca5 +SIZE (petsc-3.16.3.tar.gz) = 16799550 diff --git a/science/PETSc/pkg-plist b/science/PETSc/pkg-plist index 9b67ede07e7d..64994209f72c 100644 --- a/science/PETSc/pkg-plist +++ b/science/PETSc/pkg-plist @@ -26,6 +26,8 @@ include/petsc/finclude/petscviewer.h include/petsc/private/bagimpl.h include/petsc/private/characteristicimpl.h include/petsc/private/cudavecimpl.h +include/petsc/private/cupminterface.hpp +include/petsc/private/deviceimpl.h include/petsc/private/dmadaptorimpl.h include/petsc/private/dmdaimpl.h include/petsc/private/dmfieldimpl.h @@ -36,6 +38,7 @@ include/petsc/private/dmmbimpl.h include/petsc/private/dmnetworkimpl.h include/petsc/private/dmpatchimpl.h include/petsc/private/dmpleximpl.h +include/petsc/private/dmplextransformimpl.h include/petsc/private/dmproductimpl.h include/petsc/private/dmstagimpl.h include/petsc/private/dmswarmimpl.h @@ -53,18 +56,20 @@ include/petsc/private/hashset.h include/petsc/private/hashseti.h include/petsc/private/hashsetij.h include/petsc/private/hashtable.h +include/petsc/private/hipvecimpl.h include/petsc/private/isimpl.h include/petsc/private/kernels/blockinvert.h include/petsc/private/kernels/blockmatmult.h include/petsc/private/kernels/blocktranspose.h -include/petsc/private/kernels/khash.h include/petsc/private/kernels/petscaxpy.h +include/petsc/private/khash/khash.h include/petsc/private/kspimpl.h include/petsc/private/linesearchimpl.h include/petsc/private/logimpl.h include/petsc/private/matimpl.h include/petsc/private/matorderimpl.h include/petsc/private/partitionerimpl.h +include/petsc/private/pcasmimpl.h include/petsc/private/pcgamgimpl.h include/petsc/private/pcimpl.h include/petsc/private/pcmgimpl.h @@ -79,16 +84,18 @@ include/petsc/private/petschpddm.h include/petsc/private/petschypre.h include/petsc/private/petscimpl.h include/petsc/private/petscscalapack.h +include/petsc/private/randomimpl.h include/petsc/private/sectionimpl.h include/petsc/private/sfimpl.h include/petsc/private/snesimpl.h include/petsc/private/taoimpl.h include/petsc/private/taolinesearchimpl.h +include/petsc/private/traithelpers.hpp include/petsc/private/tshistoryimpl.h include/petsc/private/tsimpl.h +include/petsc/private/valgrind/valgrind.h include/petsc/private/vecimpl.h -include/petsc/private/vecscatterimpl.h -include/petsc/private/vieweradios2impl.h +include/petsc/private/vecimpl_kokkos.hpp include/petsc/private/vieweradiosimpl.h include/petsc/private/viewerexodusiiimpl.h include/petsc/private/viewerhdf5impl.h @@ -103,18 +110,23 @@ include/petscblaslapack_mangle.h include/petscbt.h include/petsccharacteristic.h include/petscconf.h +include/petscconf_poison.h include/petscconfiginfo.h include/petscconvest.h include/petscctable.h include/petsccublas.h include/petsccxxcomplexfix.h include/petscdef.mod +include/petscdevice.h +include/petscdevicetypes.h include/petscdm.h include/petscdm.mod include/petscdmadaptor.h +include/petscdmceed.h include/petscdmcomposite.h include/petscdmda.h include/petscdmda.mod +include/petscdmda_kokkos.hpp include/petscdmdadef.mod include/petscdmdatypes.h include/petscdmdef.mod @@ -135,7 +147,10 @@ include/petscdmpatch.mod include/petscdmpatchdef.mod include/petscdmplex.h include/petscdmplex.mod +include/petscdmplexceed.h include/petscdmplexdef.mod +include/petscdmplextransform.h +include/petscdmplextransformtypes.h include/petscdmplextypes.h include/petscdmproduct.h include/petscdmredundant.h @@ -154,10 +169,12 @@ include/petscdt.h include/petscdt.mod include/petscerror.h include/petscfe.h +include/petscfeceed.h include/petscfetypes.h include/petscfix.h include/petscfv.h include/petscfvtypes.h +include/petschipblas.h include/petscis.h include/petscis.mod include/petscisdef.mod @@ -178,8 +195,10 @@ include/petscmatdef.mod include/petscmatdefdummy.mod include/petscmatelemental.h include/petscmath.h +include/petscmathtool.h include/petscmathypre.h include/petscmatlab.h +include/petscmpi.mod include/petscoptions.h include/petscpartitioner.h include/petscpc.h @@ -211,10 +230,9 @@ include/petscts.h include/petscts.mod include/petsctsdef.mod include/petsctsdefdummy.mod -include/petscvalgrind.h include/petscvec.h -include/petscvec.hpp include/petscvec.mod +include/petscvec_kokkos.hpp include/petscvecdef.mod include/petscvecdefdummy.mod include/petscversion.h @@ -246,7 +264,9 @@ lib/petsc/bin/petscnagupgrade.py lib/petsc/bin/saws/SAWs.py lib/petsc/bin/saws/getSAWs.bash lib/petsc/bin/saws/getStack.bash +lib/petsc/bin/tasClasses.py lib/petsc/bin/taucc.py +lib/petsc/bin/xml2flamegraph.py lib/petsc/conf/configure-hash lib/petsc/conf/memoryerror.log lib/petsc/conf/modules/petsc/%%SHLIB%% @@ -332,7 +352,12 @@ libdata/pkgconfig/petsc.pc %%DATADIR%%/datafiles/meshes/hybrid_triquad.msh %%DATADIR%%/datafiles/meshes/mesh-3d-box-innersphere.msh %%DATADIR%%/datafiles/meshes/mesh-3d-box-innersphere_bin.msh +%%DATADIR%%/datafiles/meshes/nozzle.egads %%DATADIR%%/datafiles/meshes/nozzle.egadslite +%%DATADIR%%/datafiles/meshes/nozzle.igs +%%DATADIR%%/datafiles/meshes/nozzle.stp +%%DATADIR%%/datafiles/meshes/quads-q2.msh +%%DATADIR%%/datafiles/meshes/quads-q3.msh %%DATADIR%%/datafiles/meshes/sevenside-quad-15.exo %%DATADIR%%/datafiles/meshes/sevenside-quad.exo %%DATADIR%%/datafiles/meshes/sevenside.exo @@ -349,7 +374,10 @@ libdata/pkgconfig/petsc.pc %%DATADIR%%/datafiles/meshes/surfacesphere_bin.msh %%DATADIR%%/datafiles/meshes/texas.msh %%DATADIR%%/datafiles/meshes/tut21.cgns +%%DATADIR%%/datafiles/meshes/unit_sphere.egads %%DATADIR%%/datafiles/meshes/unit_sphere.egadslite +%%DATADIR%%/datafiles/meshes/unit_sphere.igs +%%DATADIR%%/datafiles/meshes/unit_sphere.stp %%DATADIR%%/matlab/@PetscOpenFile/PetscOpenFile.m %%DATADIR%%/matlab/@PetscOpenFile/close.m %%DATADIR%%/matlab/@PetscOpenFile/read.m @@ -388,5 +416,5 @@ libdata/pkgconfig/petsc.pc %%DATADIR%%/saws/js/treeInterface.js %%DATADIR%%/saws/js/utils.js %%DATADIR%%/saws/readme +%%DATADIR%%/valgrind/petsc-val.supp %%DATADIR%%/xml/performance_xml2html.xsl -@dir lib/petsc/bin/__pycache__ diff --git a/science/code_saturne/Makefile b/science/code_saturne/Makefile index 1b6694e64870..fa4ed70798e8 100644 --- a/science/code_saturne/Makefile +++ b/science/code_saturne/Makefile @@ -2,6 +2,7 @@ PORTNAME= code_saturne PORTVERSION= 7.1.0 +PORTREVISION= 1 DISTVERSIONPREFIX= v CATEGORIES= science parallel