Skip site navigation (1)Skip section navigation (2)
Date:      Wed, 27 May 2020 20:31:24 +0000 (UTC)
From:      Yuri Victorovich <yuri@FreeBSD.org>
To:        ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org
Subject:   svn commit: r536715 - head/science/jmol
Message-ID:  <202005272031.04RKVOim037320@repo.freebsd.org>

next in thread | raw e-mail | index | archive | help
Author: yuri
Date: Wed May 27 20:31:24 2020
New Revision: 536715
URL: https://svnweb.freebsd.org/changeset/ports/536715

Log:
  science/jmol: Add JSmol (Java viewer for chemical structures in 3D) as a port option
  
  PR:		246703
  Submitted by:	thierry

Added:
  head/science/jmol/pkg-plist-jsmol   (contents, props changed)
Modified:
  head/science/jmol/Makefile
  head/science/jmol/pkg-descr

Modified: head/science/jmol/Makefile
==============================================================================
--- head/science/jmol/Makefile	Wed May 27 20:10:56 2020	(r536714)
+++ head/science/jmol/Makefile	Wed May 27 20:31:24 2020	(r536715)
@@ -3,7 +3,7 @@
 
 PORTNAME=	Jmol
 DISTVERSION=	14.30.2
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science java
 MASTER_SITES=	SF/${PORTNAME:tl}/${PORTNAME}/Version%20${DISTVERSION:R}/${PORTNAME}%20${DISTVERSION}/
 DISTFILES=	${PORTNAME}-${DISTVERSION}-full${EXTRACT_SUFX}
@@ -30,8 +30,13 @@ JARS=		${PORTNAME}.jar ${PORTNAME}Data.jar ${PORTNAME}
 PLIST_FILES=	${EXES:S/^/bin\//} \
 		${JARS:S/^/${JAVAJARDIR}\//}
 
-OPTIONS_DEFINE=	DOCS
+OPTIONS_DEFINE=		DOCS JSMOL
+OPTIONS_DEFAULT=	JSMOL
 
+JSMOL_DESC=		Install JSmol
+JSMOL_BUILD_DEPENDS=	unzip>0:archivers/unzip
+JSMOL_VARS=		WWWDIR=${PREFIX}/www/JSmol PLIST=${.CURDIR}/pkg-plist-jsmol
+
 PORTDOCS=	*
 
 DESKTOP_ENTRIES="${PORTNAME}" "" "" "${PORTNAME:tl}" "" false
@@ -39,6 +44,10 @@ DESKTOP_ENTRIES="${PORTNAME}" "" "" "${PORTNAME:tl}" "
 post-patch:
 	@${REINPLACE_CMD} 's|<input message="private property file.*||' ${WRKSRC}/build.xml
 
+post-build-JSMOL-on:
+	@${MKDIR} ${WRKDIR}${PREFIX}/www
+	@${UNZIP_CMD} -d ${WRKDIR}${PREFIX}/www ${WRKSRC}/jsmol.zip
+
 do-install:
 .for exe in ${EXES}
 	${INSTALL_SCRIPT} ${WRKDIR}/${exe} ${STAGEDIR}${PREFIX}/bin
@@ -46,6 +55,10 @@ do-install:
 .for jar in ${JARS}
 	${INSTALL_DATA} ${WRKSRC}/build/${jar} ${STAGEDIR}${JAVAJARDIR}
 .endfor
+
+do-install-JSMOL-on:
+	${MKDIR} ${STAGEDIR}${WWWDIR}
+	${CP} -r ${WRKDIR}${PREFIX}/www/jsmol/* ${STAGEDIR}${WWWDIR}
 
 do-install-DOCS-on:
 	cd ${WRKSRC}/doc && ${COPYTREE_SHARE} . ${STAGEDIR}${DOCSDIR}

Modified: head/science/jmol/pkg-descr
==============================================================================
--- head/science/jmol/pkg-descr	Wed May 27 20:10:56 2020	(r536714)
+++ head/science/jmol/pkg-descr	Wed May 27 20:31:24 2020	(r536715)
@@ -13,3 +13,4 @@ for spectroscopy, JSME for 2D->3D conversion, POV-Ray 
 programs for 3D printing (VRML export).
 
 WWW: https://sourceforge.net/projects/jmol/
+WWW: http://jsmol.sourceforge.net/

Added: head/science/jmol/pkg-plist-jsmol
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/science/jmol/pkg-plist-jsmol	Wed May 27 20:31:24 2020	(r536715)
@@ -0,0 +1,1750 @@
+%%WWWDIR%%/JSmol.GLmol.min.js
+%%WWWDIR%%/JSmol.lite.js
+%%WWWDIR%%/JSmol.lite.nojq.js
+%%WWWDIR%%/JSmol.min.js
+%%WWWDIR%%/JSmol.min.nojq.js
+%%WWWDIR%%/README-DOWNLOAD.TXT
+%%WWWDIR%%/README.TXT
+%%WWWDIR%%/anim.htm
+%%WWWDIR%%/cip.htm
+%%WWWDIR%%/cover.htm
+%%WWWDIR%%/coverJava.htm
+%%WWWDIR%%/data/04369a.cif
+%%WWWDIR%%/data/1bna_surface.pse
+%%WWWDIR%%/data/1cbs.cif
+%%WWWDIR%%/data/1cbs_2fofc.map
+%%WWWDIR%%/data/1crn.pdb
+%%WWWDIR%%/data/1crn.pdb.gz
+%%WWWDIR%%/data/1crn_surf.png
+%%WWWDIR%%/data/1crn_surf_map.png
+%%WWWDIR%%/data/1crntour.pdb
+%%WWWDIR%%/data/1ehz.pdb.dssr
+%%WWWDIR%%/data/1fss.png
+%%WWWDIR%%/data/1fss.pse
+%%WWWDIR%%/data/1hxw.png
+%%WWWDIR%%/data/1hxw.pngj
+%%WWWDIR%%/data/1m19.pdb.gz
+%%WWWDIR%%/data/2bxaH.pdb
+%%WWWDIR%%/data/3hz7.pdb.gz
+%%WWWDIR%%/data/AgFUPMOS.cif
+%%WWWDIR%%/data/Al2O3.png
+%%WWWDIR%%/data/Crspectra.jdx
+%%WWWDIR%%/data/CuO2CCHF2.magres
+%%WWWDIR%%/data/Sr2Nb2O7_working.gif
+%%WWWDIR%%/data/Sr2Nb2O7_working.png
+%%WWWDIR%%/data/Sr2Nb2O7_working2.gif
+%%WWWDIR%%/data/Sr2Nb2O7_working2.png
+%%WWWDIR%%/data/Ti2O3.cif
+%%WWWDIR%%/data/aceticacid.spartan
+%%WWWDIR%%/data/acetophenone.jdx
+%%WWWDIR%%/data/aquation20.jdx
+%%WWWDIR%%/data/astex.cmds.txt
+%%WWWDIR%%/data/bbPlane.pse
+%%WWWDIR%%/data/benzene.c3xml
+%%WWWDIR%%/data/benzenevib.spardir/Document
+%%WWWDIR%%/data/benzenevib.spardir/M0001/Calculations
+%%WWWDIR%%/data/benzenevib.spardir/M0001/Commands
+%%WWWDIR%%/data/benzenevib.spardir/M0001/Geometry
+%%WWWDIR%%/data/benzenevib.spardir/M0001/Molecule
+%%WWWDIR%%/data/benzenevib.spardir/M0001/_spartan
+%%WWWDIR%%/data/benzenevib.spardir/M0001/archive
+%%WWWDIR%%/data/benzenevib.spardir/M0001/input
+%%WWWDIR%%/data/benzenevib.spardir/M0001/log
+%%WWWDIR%%/data/benzenevib.spardir/M0001/output
+%%WWWDIR%%/data/benzenevib.spardir/M0001/parchive
+%%WWWDIR%%/data/benzenevib.spardir/M0001/proparc
+%%WWWDIR%%/data/benzenevib.spardir/M0001/ret_code
+%%WWWDIR%%/data/benzenevib.spardir/M0001/voutput
+%%WWWDIR%%/data/benzenevib.spardir/SpreadSheet/SheetData
+%%WWWDIR%%/data/benzenevib.spardir/_locked
+%%WWWDIR%%/data/benzenevib.spardir/_spartandir
+%%WWWDIR%%/data/benzenevib.spardir/output
+%%WWWDIR%%/data/benzenevib.spardir/sheet
+%%WWWDIR%%/data/bob.png
+%%WWWDIR%%/data/bonattite.png
+%%WWWDIR%%/data/bonattite_model.png
+%%WWWDIR%%/data/browse.png
+%%WWWDIR%%/data/buckyball.mol
+%%WWWDIR%%/data/buckyball2D.mol
+%%WWWDIR%%/data/c13nmr_assigned.jdx
+%%WWWDIR%%/data/c60af.mol
+%%WWWDIR%%/data/c6h6.smol
+%%WWWDIR%%/data/caffeine.jvxl
+%%WWWDIR%%/data/caffeine.mol
+%%WWWDIR%%/data/caffeine.vdw.jvxl
+%%WWWDIR%%/data/calcite.cif
+%%WWWDIR%%/data/ch3cl.smol
+%%WWWDIR%%/data/chairflip.png
+%%WWWDIR%%/data/chalcanthite.png
+%%WWWDIR%%/data/chalcanthite_model.png
+%%WWWDIR%%/data/cl2o.gamess
+%%WWWDIR%%/data/co2.smol
+%%WWWDIR%%/data/croconic_new(1).magres
+%%WWWDIR%%/data/croconic_new.magres
+%%WWWDIR%%/data/cx1.jdx
+%%WWWDIR%%/data/cyc35_compare.png
+%%WWWDIR%%/data/cyc35_nocompare.png
+%%WWWDIR%%/data/cyclflip2.jmol
+%%WWWDIR%%/data/cyclflip2.spt
+%%WWWDIR%%/data/cyclohexaneFlip.jmol
+%%WWWDIR%%/data/cyclohexane_movie.xyz
+%%WWWDIR%%/data/diamond.cif
+%%WWWDIR%%/data/dickite.cif
+%%WWWDIR%%/data/dna.pse
+%%WWWDIR%%/data/estron.cml
+%%WWWDIR%%/data/exo.xyz
+%%WWWDIR%%/data/fid.wav
+%%WWWDIR%%/data/filled.png
+%%WWWDIR%%/data/flexfit.spt
+%%WWWDIR%%/data/gold.cif
+%%WWWDIR%%/data/icsd_200866.cif
+%%WWWDIR%%/data/icsd_250072.cif
+%%WWWDIR%%/data/icsd_26520.cif
+%%WWWDIR%%/data/ir_assigned.jdx
+%%WWWDIR%%/data/jmestar.png
+%%WWWDIR%%/data/k04041.cif
+%%WWWDIR%%/data/kuds0105a.ccdc.cif
+%%WWWDIR%%/data/lobe1.jvxl
+%%WWWDIR%%/data/lobe2.jvxl
+%%WWWDIR%%/data/maleic.cif
+%%WWWDIR%%/data/mass_assigned.jdx
+%%WWWDIR%%/data/menu.txt
+%%WWWDIR%%/data/methanol.spartan.bin
+%%WWWDIR%%/data/moAnim.png
+%%WWWDIR%%/data/n-butane_M0001.jxyz
+%%WWWDIR%%/data/n.mol
+%%WWWDIR%%/data/nacl.cif
+%%WWWDIR%%/data/nank0104a.ccdc.cif
+%%WWWDIR%%/data/nepheline.cif
+%%WWWDIR%%/data/nmr_assigned.jdx
+%%WWWDIR%%/data/no2_nbo.log.gz
+%%WWWDIR%%/data/pimentoGCMS2.dx
+%%WWWDIR%%/data/pp2.pse
+%%WWWDIR%%/data/quartz.cif
+%%WWWDIR%%/data/rabe.phonon
+%%WWWDIR%%/data/rabe.spt
+%%WWWDIR%%/data/rabe0.spt
+%%WWWDIR%%/data/rabe1.spt
+%%WWWDIR%%/data/rabe2.spt
+%%WWWDIR%%/data/sage.pmesh
+%%WWWDIR%%/data/sage.zip
+%%WWWDIR%%/data/sample78-1hnmr.jdx
+%%WWWDIR%%/data/sample78-cosy.jdx.gz
+%%WWWDIR%%/data/sebi0105c.ccdc.cif
+%%WWWDIR%%/data/square_planar.spartan
+%%WWWDIR%%/data/sr2.cif
+%%WWWDIR%%/data/t-butene.xyz
+%%WWWDIR%%/data/t.jdx
+%%WWWDIR%%/data/t.jvxl.gz
+%%WWWDIR%%/data/t.png
+%%WWWDIR%%/data/t2d.jdx
+%%WWWDIR%%/data/t3.pngj
+%%WWWDIR%%/data/t6.jdx
+%%WWWDIR%%/data/taxol.mol
+%%WWWDIR%%/data/tcb-13c.jdx
+%%WWWDIR%%/data/tcb-1h.jdx
+%%WWWDIR%%/data/test.molden
+%%WWWDIR%%/data/test.spt
+%%WWWDIR%%/data/troilite.cif
+%%WWWDIR%%/data/vasp.xml
+%%WWWDIR%%/data/vib.xml
+%%WWWDIR%%/data/vinylpyrr.jdx
+%%WWWDIR%%/data/virus.png
+%%WWWDIR%%/data/water.xodydata
+%%WWWDIR%%/data/water.xyz.gz
+%%WWWDIR%%/density/3hyd.pdb
+%%WWWDIR%%/density/3hyd_map.ccp4
+%%WWWDIR%%/density/3hyd_map.ccp4.gz
+%%WWWDIR%%/density/index.htm
+%%WWWDIR%%/density/scroller.js
+%%WWWDIR%%/density/transp.gif
+%%WWWDIR%%/dssr.htm
+%%WWWDIR%%/ext_rcsb.htm
+%%WWWDIR%%/flot/NEWS.txt
+%%WWWDIR%%/flot/README.txt
+%%WWWDIR%%/flot/TODO
+%%WWWDIR%%/flot/jmol-flot.png
+%%WWWDIR%%/flot/jquery.flot2.js
+%%WWWDIR%%/hackamol.htm
+%%WWWDIR%%/helix.htm
+%%WWWDIR%%/idioma/ar.po
+%%WWWDIR%%/idioma/bs.po
+%%WWWDIR%%/idioma/ca.po
+%%WWWDIR%%/idioma/ca@valencia.po
+%%WWWDIR%%/idioma/cs.po
+%%WWWDIR%%/idioma/da.po
+%%WWWDIR%%/idioma/de.po
+%%WWWDIR%%/idioma/el.po
+%%WWWDIR%%/idioma/en_GB.po
+%%WWWDIR%%/idioma/es.po
+%%WWWDIR%%/idioma/et.po
+%%WWWDIR%%/idioma/eu.po
+%%WWWDIR%%/idioma/fi.po
+%%WWWDIR%%/idioma/fr.po
+%%WWWDIR%%/idioma/fy.po
+%%WWWDIR%%/idioma/hu.po
+%%WWWDIR%%/idioma/hy.po
+%%WWWDIR%%/idioma/id.po
+%%WWWDIR%%/idioma/it.po
+%%WWWDIR%%/idioma/ja.po
+%%WWWDIR%%/idioma/jv.po
+%%WWWDIR%%/idioma/ko.po
+%%WWWDIR%%/idioma/ms.po
+%%WWWDIR%%/idioma/nb.po
+%%WWWDIR%%/idioma/nl.po
+%%WWWDIR%%/idioma/oc.po
+%%WWWDIR%%/idioma/pl.po
+%%WWWDIR%%/idioma/pt.po
+%%WWWDIR%%/idioma/pt_BR.po
+%%WWWDIR%%/idioma/ru.po
+%%WWWDIR%%/idioma/sl.po
+%%WWWDIR%%/idioma/sv.po
+%%WWWDIR%%/idioma/ta.po
+%%WWWDIR%%/idioma/te.po
+%%WWWDIR%%/idioma/tr.po
+%%WWWDIR%%/idioma/ug.po
+%%WWWDIR%%/idioma/uk.po
+%%WWWDIR%%/idioma/uz.po
+%%WWWDIR%%/idioma/zh_CN.po
+%%WWWDIR%%/idioma/zh_TW.po
+%%WWWDIR%%/imageDrop.htm
+%%WWWDIR%%/images.htm
+%%WWWDIR%%/images/b.png
+%%WWWDIR%%/images/info.png
+%%WWWDIR%%/images/test1.jpg
+%%WWWDIR%%/images/test2.jpg
+%%WWWDIR%%/inchi.htm
+%%WWWDIR%%/inchi/LICENSE.txt
+%%WWWDIR%%/inchi/inchi.js
+%%WWWDIR%%/inchi/inchi.js.mem
+%%WWWDIR%%/inline_old.htm
+%%WWWDIR%%/j2s/J/Jmol.properties
+%%WWWDIR%%/j2s/J/adapter/readers/cif/Cif2DataParser.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/Cif2Reader.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/CifReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/MMCifReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/MMCifValidationParser.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/MMTFReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/MSCifParser.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/MSRdr.js
+%%WWWDIR%%/j2s/J/adapter/readers/cif/Subsystem.js
+%%WWWDIR%%/j2s/J/adapter/readers/molxyz/Mol3DReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/molxyz/MolReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/molxyz/V3000Rdr.js
+%%WWWDIR%%/j2s/J/adapter/readers/molxyz/XyzReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/AFLOWReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/BinaryDcdReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/ForceFieldReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/GromacsReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/JcampdxReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/MdCrdReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/MdTopReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/Mol2Reader.js
+%%WWWDIR%%/j2s/J/adapter/readers/more/TlsDataOnlyReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pdb/JmolDataReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pdb/P2nReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pdb/PdbReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pdb/PqrReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pymol/JmolObject.js
+%%WWWDIR%%/j2s/J/adapter/readers/pymol/PickleReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pymol/PyMOL.js
+%%WWWDIR%%/j2s/J/adapter/readers/pymol/PyMOLGroup.js
+%%WWWDIR%%/j2s/J/adapter/readers/pymol/PyMOLReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/pymol/PyMOLScene.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/AdfReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/BasisFunctionReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/CsfReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/DgridReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GamessReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GamessUKReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GamessUSReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GaussianFchkReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GaussianReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GaussianWfnReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/GenNBOReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/JaguarReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/MOReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/MoldenReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/MopacGraphfReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/MopacSlaterReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/NBOParser.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/NWChemReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/PsiReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/QCJSONReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/QchemReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/SlaterReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/quantum/WebMOReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/AlchemyReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/AmpacReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/CubeReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/FAHReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/FoldingXyzReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/GhemicalMMReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/HyperChemReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/InputReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/JSONReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/JmeReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/MopacArchiveReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/MopacReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/simple/TinkerReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/spartan/OdysseyReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/spartan/SpartanArchive.js
+%%WWWDIR%%/j2s/J/adapter/readers/spartan/SpartanInputReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/spartan/SpartanReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/spartan/SpartanSmolReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/spartan/SpartanUtil.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlArgusReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlChem3dReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlCmlReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlHandler.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlMOReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlMagResReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlMolproReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlOdysseyReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlQEReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlVaspReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xml/XmlXsdReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/AbinitReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/AimsReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/BilbaoReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/CastepReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/CgdReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/CrystalReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/DmolReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/EspressoReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/GulpReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/JanaReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/MagresReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/ShelxReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/SiestaReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/VaspChgcarReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/VaspOutcarReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/VaspPoscarReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/Wien2kReader.js
+%%WWWDIR%%/j2s/J/adapter/readers/xtal/XcrysdenReader.js
+%%WWWDIR%%/j2s/J/adapter/smarter/Atom.js
+%%WWWDIR%%/j2s/J/adapter/smarter/AtomIterator.js
+%%WWWDIR%%/j2s/J/adapter/smarter/AtomSetCollection.js
+%%WWWDIR%%/j2s/J/adapter/smarter/AtomSetCollectionReader.js
+%%WWWDIR%%/j2s/J/adapter/smarter/AtomSetObject.js
+%%WWWDIR%%/j2s/J/adapter/smarter/Bond.js
+%%WWWDIR%%/j2s/J/adapter/smarter/BondIterator.js
+%%WWWDIR%%/j2s/J/adapter/smarter/MSInterface.js
+%%WWWDIR%%/j2s/J/adapter/smarter/Resolver.js
+%%WWWDIR%%/j2s/J/adapter/smarter/SmarterJmolAdapter.js
+%%WWWDIR%%/j2s/J/adapter/smarter/Structure.js
+%%WWWDIR%%/j2s/J/adapter/smarter/StructureIterator.js
+%%WWWDIR%%/j2s/J/adapter/smarter/XtalSymmetry.js
+%%WWWDIR%%/j2s/J/adapter/writers/QCJSONWriter.js
+%%WWWDIR%%/j2s/J/api/AtomIndexIterator.js
+%%WWWDIR%%/j2s/J/api/EventManager.js
+%%WWWDIR%%/j2s/J/api/FontManager.js
+%%WWWDIR%%/j2s/J/api/GenericFileInterface.js
+%%WWWDIR%%/j2s/J/api/GenericGraphics.js
+%%WWWDIR%%/j2s/J/api/GenericImageDialog.js
+%%WWWDIR%%/j2s/J/api/GenericMenuInterface.js
+%%WWWDIR%%/j2s/J/api/GenericMouseInterface.js
+%%WWWDIR%%/j2s/J/api/GenericPlatform.js
+%%WWWDIR%%/j2s/J/api/Interface.js
+%%WWWDIR%%/j2s/J/api/JSVInterface.js
+%%WWWDIR%%/j2s/J/api/JmolAbstractButton.js
+%%WWWDIR%%/j2s/J/api/JmolAdapter.js
+%%WWWDIR%%/j2s/J/api/JmolAdapterAtomIterator.js
+%%WWWDIR%%/j2s/J/api/JmolAdapterBondIterator.js
+%%WWWDIR%%/j2s/J/api/JmolAdapterStructureIterator.js
+%%WWWDIR%%/j2s/J/api/JmolAnnotationParser.js
+%%WWWDIR%%/j2s/J/api/JmolAppAPI.js
+%%WWWDIR%%/j2s/J/api/JmolAppConsoleInterface.js
+%%WWWDIR%%/j2s/J/api/JmolAppletInterface.js
+%%WWWDIR%%/j2s/J/api/JmolAudioPlayer.js
+%%WWWDIR%%/j2s/J/api/JmolCallbackListener.js
+%%WWWDIR%%/j2s/J/api/JmolDataManager.js
+%%WWWDIR%%/j2s/J/api/JmolDialogInterface.js
+%%WWWDIR%%/j2s/J/api/JmolDomReaderInterface.js
+%%WWWDIR%%/j2s/J/api/JmolDropEditor.js
+%%WWWDIR%%/j2s/J/api/JmolEnvCalc.js
+%%WWWDIR%%/j2s/J/api/JmolFilesReaderInterface.js
+%%WWWDIR%%/j2s/J/api/JmolGestureServerInterface.js
+%%WWWDIR%%/j2s/J/api/JmolGraphicsInterface.js
+%%WWWDIR%%/j2s/J/api/JmolJDXMOLParser.js
+%%WWWDIR%%/j2s/J/api/JmolJDXMOLReader.js
+%%WWWDIR%%/j2s/J/api/JmolJSpecView.js
+%%WWWDIR%%/j2s/J/api/JmolMeasurementClient.js
+%%WWWDIR%%/j2s/J/api/JmolModulationSet.js
+%%WWWDIR%%/j2s/J/api/JmolMovieCreatorInterface.js
+%%WWWDIR%%/j2s/J/api/JmolNMRInterface.js
+%%WWWDIR%%/j2s/J/api/JmolNavigatorInterface.js
+%%WWWDIR%%/j2s/J/api/JmolParallelProcessor.js
+%%WWWDIR%%/j2s/J/api/JmolPatternMatcher.js
+%%WWWDIR%%/j2s/J/api/JmolPdfCreatorInterface.js
+%%WWWDIR%%/j2s/J/api/JmolPropertyManager.js
+%%WWWDIR%%/j2s/J/api/JmolRendererInterface.js
+%%WWWDIR%%/j2s/J/api/JmolRepaintManager.js
+%%WWWDIR%%/j2s/J/api/JmolSceneGenerator.js
+%%WWWDIR%%/j2s/J/api/JmolScriptEditorInterface.js
+%%WWWDIR%%/j2s/J/api/JmolScriptEvaluator.js
+%%WWWDIR%%/j2s/J/api/JmolScriptFunction.js
+%%WWWDIR%%/j2s/J/api/JmolScriptManager.js
+%%WWWDIR%%/j2s/J/api/JmolSelectionListener.js
+%%WWWDIR%%/j2s/J/api/JmolStatusListener.js
+%%WWWDIR%%/j2s/J/api/JmolSyncInterface.js
+%%WWWDIR%%/j2s/J/api/JmolTouchSimulatorInterface.js
+%%WWWDIR%%/j2s/J/api/JmolViewer.js
+%%WWWDIR%%/j2s/J/api/JmolZipUtilities.js
+%%WWWDIR%%/j2s/J/api/PlatformViewer.js
+%%WWWDIR%%/j2s/J/api/PymolAtomReader.js
+%%WWWDIR%%/j2s/J/api/SC.js
+%%WWWDIR%%/j2s/J/api/SmilesMatcherInterface.js
+%%WWWDIR%%/j2s/J/api/SymmetryInterface.js
+%%WWWDIR%%/j2s/J/api/Translator.js
+%%WWWDIR%%/j2s/J/api/js/GenericConsoleTextArea.js
+%%WWWDIR%%/j2s/J/api/js/JSConsole.js
+%%WWWDIR%%/j2s/J/api/js/JSmolAppletObject.js
+%%WWWDIR%%/j2s/J/api/js/JmolToJSmolInterface.js
+%%WWWDIR%%/j2s/J/appletjs/Jmol.js
+%%WWWDIR%%/j2s/J/atomdata/AtomData.js
+%%WWWDIR%%/j2s/J/atomdata/AtomDataServer.js
+%%WWWDIR%%/j2s/J/atomdata/RadiusData.js
+%%WWWDIR%%/j2s/J/awtjs/Event.js
+%%WWWDIR%%/j2s/J/awtjs/Platform.js
+%%WWWDIR%%/j2s/J/awtjs/swing/AbstractButton.js
+%%WWWDIR%%/j2s/J/awtjs/swing/AbstractTableModel.js
+%%WWWDIR%%/j2s/J/awtjs/swing/BorderLayout.js
+%%WWWDIR%%/j2s/J/awtjs/swing/ButtonGroup.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Cell.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Color.js
+%%WWWDIR%%/j2s/J/awtjs/swing/ColumnSelectionModel.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Component.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Container.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Dimension.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Document.js
+%%WWWDIR%%/j2s/J/awtjs/swing/FlowLayout.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Grid.js
+%%WWWDIR%%/j2s/J/awtjs/swing/GridBagConstraints.js
+%%WWWDIR%%/j2s/J/awtjs/swing/GridBagLayout.js
+%%WWWDIR%%/j2s/J/awtjs/swing/HTMLElement.js
+%%WWWDIR%%/j2s/J/awtjs/swing/HTMLWindowEvent.js
+%%WWWDIR%%/j2s/J/awtjs/swing/Insets.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JButton.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JCheckBox.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JCheckBoxMenuItem.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JComboBox.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JComponent.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JComponentImp.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JContentPane.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JDialog.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JEditorPane.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JLabel.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JMenu.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JMenuItem.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JPanel.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JPopupMenu.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JRadioButtonMenuItem.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JScrollPane.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JSplitPane.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JTable.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JTextField.js
+%%WWWDIR%%/j2s/J/awtjs/swing/JTextPane.js
+%%WWWDIR%%/j2s/J/awtjs/swing/LayoutManager.js
+%%WWWDIR%%/j2s/J/awtjs/swing/ListSelectionModel.js
+%%WWWDIR%%/j2s/J/awtjs/swing/SwingConstants.js
+%%WWWDIR%%/j2s/J/awtjs/swing/SwingController.js
+%%WWWDIR%%/j2s/J/awtjs/swing/TableCellRenderer.js
+%%WWWDIR%%/j2s/J/awtjs/swing/TableColumn.js
+%%WWWDIR%%/j2s/J/awtjs2d/Display.js
+%%WWWDIR%%/j2s/J/awtjs2d/Image.js
+%%WWWDIR%%/j2s/J/awtjs2d/JSFile.js
+%%WWWDIR%%/j2s/J/awtjs2d/JSFont.js
+%%WWWDIR%%/j2s/J/awtjs2d/JSJmolPopup.js
+%%WWWDIR%%/j2s/J/awtjs2d/JSModelKitPopup.js
+%%WWWDIR%%/j2s/J/awtjs2d/JSPopupHelper.js
+%%WWWDIR%%/j2s/J/awtjs2d/JsG2D.js
+%%WWWDIR%%/j2s/J/awtjs2d/Mouse.js
+%%WWWDIR%%/j2s/J/awtjs2d/Platform.js
+%%WWWDIR%%/j2s/J/bspt/Bspf.js
+%%WWWDIR%%/j2s/J/bspt/Bspt.js
+%%WWWDIR%%/j2s/J/bspt/CubeIterator.js
+%%WWWDIR%%/j2s/J/bspt/Element.js
+%%WWWDIR%%/j2s/J/bspt/Leaf.js
+%%WWWDIR%%/j2s/J/bspt/Node.js
+%%WWWDIR%%/j2s/J/bspt/PointIterator.js
+%%WWWDIR%%/j2s/J/c/CBK.js
+%%WWWDIR%%/j2s/J/c/FIL.js
+%%WWWDIR%%/j2s/J/c/HB.js
+%%WWWDIR%%/j2s/J/c/PAL.js
+%%WWWDIR%%/j2s/J/c/STER.js
+%%WWWDIR%%/j2s/J/c/STR.js
+%%WWWDIR%%/j2s/J/c/VDW.js
+%%WWWDIR%%/j2s/J/console/GenericConsole.js
+%%WWWDIR%%/j2s/J/console/GenericTextArea.js
+%%WWWDIR%%/j2s/J/consolejs/AppletConsole.js
+%%WWWDIR%%/j2s/J/consolejs/JSConsole.js
+%%WWWDIR%%/j2s/J/dssx/AnnotationParser.js
+%%WWWDIR%%/j2s/J/dssx/Bridge.js
+%%WWWDIR%%/j2s/J/dssx/DSSP.js
+%%WWWDIR%%/j2s/J/dssx/DSSR0.js
+%%WWWDIR%%/j2s/J/dssx/DSSR1.js
+%%WWWDIR%%/j2s/J/export/Export3D.js
+%%WWWDIR%%/j2s/J/export/JSExporter.js
+%%WWWDIR%%/j2s/J/export/MeshData.js
+%%WWWDIR%%/j2s/J/export/UseTable.js
+%%WWWDIR%%/j2s/J/export/_IdtfExporter.js
+%%WWWDIR%%/j2s/J/export/_MayaExporter.js
+%%WWWDIR%%/j2s/J/export/_ObjExporter.js
+%%WWWDIR%%/j2s/J/export/_PovrayExporter.js
+%%WWWDIR%%/j2s/J/export/_StlExporter.js
+%%WWWDIR%%/j2s/J/export/_TachyonExporter.js
+%%WWWDIR%%/j2s/J/export/_VrmlExporter.js
+%%WWWDIR%%/j2s/J/export/_X3dExporter.js
+%%WWWDIR%%/j2s/J/export/__CartesianExporter.js
+%%WWWDIR%%/j2s/J/export/__RayTracerExporter.js
+%%WWWDIR%%/j2s/J/export/___Exporter.js
+%%WWWDIR%%/j2s/J/g3d/CircleRenderer.js
+%%WWWDIR%%/j2s/J/g3d/CylinderRenderer.js
+%%WWWDIR%%/j2s/J/g3d/G3DRenderer.js
+%%WWWDIR%%/j2s/J/g3d/Graphics3D.js
+%%WWWDIR%%/j2s/J/g3d/HermiteRenderer.js
+%%WWWDIR%%/j2s/J/g3d/LineRenderer.js
+%%WWWDIR%%/j2s/J/g3d/Pixelator.js
+%%WWWDIR%%/j2s/J/g3d/PixelatorScreened.js
+%%WWWDIR%%/j2s/J/g3d/PixelatorShaded.js
+%%WWWDIR%%/j2s/J/g3d/PixelatorT.js
+%%WWWDIR%%/j2s/J/g3d/Platform3D.js
+%%WWWDIR%%/j2s/J/g3d/PrecisionRenderer.js
+%%WWWDIR%%/j2s/J/g3d/SphereRenderer.js
+%%WWWDIR%%/j2s/J/g3d/TextRenderer.js
+%%WWWDIR%%/j2s/J/g3d/TextString.js
+%%WWWDIR%%/j2s/J/g3d/TriangleRenderer.js
+%%WWWDIR%%/j2s/J/geodesic/EnvelopeCalculation.js
+%%WWWDIR%%/j2s/J/i18n/GT.js
+%%WWWDIR%%/j2s/J/i18n/Language.js
+%%WWWDIR%%/j2s/J/i18n/Resource.js
+%%WWWDIR%%/j2s/J/image/AviCreator.js
+%%WWWDIR%%/j2s/J/io/DOMReader.js
+%%WWWDIR%%/j2s/J/io/FileReader.js
+%%WWWDIR%%/j2s/J/io/FilesReader.js
+%%WWWDIR%%/j2s/J/io/JmolUtil.js
+%%WWWDIR%%/j2s/J/jsv/JDXMOLParser.js
+%%WWWDIR%%/j2s/J/jsv/JSpecView.js
+%%WWWDIR%%/j2s/J/jvxl/api/MeshDataServer.js
+%%WWWDIR%%/j2s/J/jvxl/api/VertexDataServer.js
+%%WWWDIR%%/j2s/J/jvxl/calc/MarchingCubes.js
+%%WWWDIR%%/j2s/J/jvxl/calc/MarchingSquares.js
+%%WWWDIR%%/j2s/J/jvxl/data/JvxlCoder.js
+%%WWWDIR%%/j2s/J/jvxl/data/JvxlData.js
+%%WWWDIR%%/j2s/J/jvxl/data/MeshData.js
+%%WWWDIR%%/j2s/J/jvxl/data/VolumeData.js
+%%WWWDIR%%/j2s/J/jvxl/readers/ApbsReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/AtomDataReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/AtomPropertyMapper.js
+%%WWWDIR%%/j2s/J/jvxl/readers/BCifDensityReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/CastepDensityReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/CifDensityReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/CubeReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/DelPhiBinaryReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/Dsn6BinaryReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/EfvetReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoFxyReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoFxyzReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoIntersectAtomReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoIntersectGridReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoIntersectReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoMOReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoMepReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoMlpReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoPlaneReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoShapeReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/IsoSolventReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/JaguarReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/JvxlReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/JvxlXmlReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/KinemageReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/MapFileReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/MrcBinaryReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/MsmsReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/NffReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/ObjReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/Parameters.js
+%%WWWDIR%%/j2s/J/jvxl/readers/PeriodicVolumeFileReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/PltFormattedReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/Pmesh4Reader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/PmeshReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/PolygonFileReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/PyMOLMeshReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/Ras3DReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/SurfaceFileReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/SurfaceGenerator.js
+%%WWWDIR%%/j2s/J/jvxl/readers/SurfaceReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/UhbdReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/VaspChgcarReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/VolumeDataReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/VolumeFileReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/XmlReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/XplorReader.js
+%%WWWDIR%%/j2s/J/jvxl/readers/XsfReader.js
+%%WWWDIR%%/j2s/J/modelkit/Constraint.js
+%%WWWDIR%%/j2s/J/modelkit/ModelKitPopup.js
+%%WWWDIR%%/j2s/J/modelkit/ModelKitPopupResourceBundle.js
+%%WWWDIR%%/j2s/J/modelkit/images/atoms.png
+%%WWWDIR%%/j2s/J/modelkit/images/bonds.png
+%%WWWDIR%%/j2s/J/modelkit/images/dotdotdot.png
+%%WWWDIR%%/j2s/J/modelkit/images/undoButton.gif
+%%WWWDIR%%/j2s/J/modelkit/images/xtal.png
+%%WWWDIR%%/j2s/J/modelkit/images/xtal_pngj.png
+%%WWWDIR%%/j2s/J/navigate/Navigator.js
+%%WWWDIR%%/j2s/J/popup/GenericPopup.js
+%%WWWDIR%%/j2s/J/popup/JmolGenericPopup.js
+%%WWWDIR%%/j2s/J/popup/JmolPopup.js
+%%WWWDIR%%/j2s/J/popup/MainPopupResourceBundle.js
+%%WWWDIR%%/j2s/J/popup/PopupHelper.js
+%%WWWDIR%%/j2s/J/popup/PopupResource.js
+%%WWWDIR%%/j2s/J/quantum/MOCalculation.js
+%%WWWDIR%%/j2s/J/quantum/MepCalculation.js
+%%WWWDIR%%/j2s/J/quantum/MlpCalculation.js
+%%WWWDIR%%/j2s/J/quantum/NMRCalculation.js
+%%WWWDIR%%/j2s/J/quantum/NMRNoeMatrix.js
+%%WWWDIR%%/j2s/J/quantum/NciCalculation.js
+%%WWWDIR%%/j2s/J/quantum/QMAtom.js
+%%WWWDIR%%/j2s/J/quantum/QS.js
+%%WWWDIR%%/j2s/J/quantum/QuantumCalculation.js
+%%WWWDIR%%/j2s/J/quantum/QuantumPlaneCalculation.js
+%%WWWDIR%%/j2s/J/quantum/SlaterData.js
+%%WWWDIR%%/j2s/J/quantum/atomicLipophilicity.txt
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdder.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdder11H.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdder13I.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdder7F.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdder9G.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdderF.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdderG.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdderH.js
+%%WWWDIR%%/j2s/J/quantum/mo/DataAdderI.js
+%%WWWDIR%%/j2s/J/quantum/nmr_data.txt
+%%WWWDIR%%/j2s/J/render/AxesRenderer.js
+%%WWWDIR%%/j2s/J/render/BallsRenderer.js
+%%WWWDIR%%/j2s/J/render/BbcageRenderer.js
+%%WWWDIR%%/j2s/J/render/CageRenderer.js
+%%WWWDIR%%/j2s/J/render/EchoRenderer.js
+%%WWWDIR%%/j2s/J/render/FontLineShapeRenderer.js
+%%WWWDIR%%/j2s/J/render/FrankRenderer.js
+%%WWWDIR%%/j2s/J/render/HalosRenderer.js
+%%WWWDIR%%/j2s/J/render/HoverRenderer.js
+%%WWWDIR%%/j2s/J/render/LabelsRenderer.js
+%%WWWDIR%%/j2s/J/render/MeasuresRenderer.js
+%%WWWDIR%%/j2s/J/render/MeshRenderer.js
+%%WWWDIR%%/j2s/J/render/RepaintManager.js
+%%WWWDIR%%/j2s/J/render/ShapeRenderer.js
+%%WWWDIR%%/j2s/J/render/StarsRenderer.js
+%%WWWDIR%%/j2s/J/render/SticksRenderer.js
+%%WWWDIR%%/j2s/J/render/TextRenderer.js
+%%WWWDIR%%/j2s/J/render/UccageRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/BackboneRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/BioMeshRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/BioShapeRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/CartoonRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/MeshRibbonRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/NucleicRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/RibbonsRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/RocketRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/RocketsRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/StrandsRenderer.js
+%%WWWDIR%%/j2s/J/renderbio/TraceRenderer.js
+%%WWWDIR%%/j2s/J/rendercgo/CGORenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/DipolesRenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/DotsRenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/DrawRenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/EllipsoidsRenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/GeoSurfaceRenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/PolyhedraRenderer.js
+%%WWWDIR%%/j2s/J/renderspecial/VectorsRenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/ContactRenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/IsosurfaceRenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/LcaoCartoonRenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/MolecularOrbitalRenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/NBORenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/Plot3DRenderer.js
+%%WWWDIR%%/j2s/J/rendersurface/PmeshRenderer.js
+%%WWWDIR%%/j2s/J/shape/AtomShape.js
+%%WWWDIR%%/j2s/J/shape/Axes.js
+%%WWWDIR%%/j2s/J/shape/Balls.js
+%%WWWDIR%%/j2s/J/shape/Bbcage.js
+%%WWWDIR%%/j2s/J/shape/Echo.js
+%%WWWDIR%%/j2s/J/shape/FontLineShape.js
+%%WWWDIR%%/j2s/J/shape/Frank.js
+%%WWWDIR%%/j2s/J/shape/Halos.js
+%%WWWDIR%%/j2s/J/shape/Hover.js
+%%WWWDIR%%/j2s/J/shape/Labels.js
+%%WWWDIR%%/j2s/J/shape/Measures.js
+%%WWWDIR%%/j2s/J/shape/Mesh.js
+%%WWWDIR%%/j2s/J/shape/MeshCollection.js
+%%WWWDIR%%/j2s/J/shape/Shape.js
+%%WWWDIR%%/j2s/J/shape/Stars.js
+%%WWWDIR%%/j2s/J/shape/Sticks.js
+%%WWWDIR%%/j2s/J/shape/TextShape.js
+%%WWWDIR%%/j2s/J/shape/Uccage.js
+%%WWWDIR%%/j2s/J/shapebio/Backbone.js
+%%WWWDIR%%/j2s/J/shapebio/BioShape.js
+%%WWWDIR%%/j2s/J/shapebio/BioShapeCollection.js
+%%WWWDIR%%/j2s/J/shapebio/Cartoon.js
+%%WWWDIR%%/j2s/J/shapebio/MeshRibbon.js
+%%WWWDIR%%/j2s/J/shapebio/Ribbons.js
+%%WWWDIR%%/j2s/J/shapebio/Rockets.js
+%%WWWDIR%%/j2s/J/shapebio/Strands.js
+%%WWWDIR%%/j2s/J/shapebio/Trace.js
+%%WWWDIR%%/j2s/J/shapecgo/CGO.js
+%%WWWDIR%%/j2s/J/shapecgo/CGOMesh.js
+%%WWWDIR%%/j2s/J/shapespecial/Dipole.js
+%%WWWDIR%%/j2s/J/shapespecial/Dipoles.js
+%%WWWDIR%%/j2s/J/shapespecial/Dots.js
+%%WWWDIR%%/j2s/J/shapespecial/Draw.js
+%%WWWDIR%%/j2s/J/shapespecial/DrawMesh.js
+%%WWWDIR%%/j2s/J/shapespecial/Ellipsoid.js
+%%WWWDIR%%/j2s/J/shapespecial/Ellipsoids.js
+%%WWWDIR%%/j2s/J/shapespecial/GeoSurface.js
+%%WWWDIR%%/j2s/J/shapespecial/Polyhedra.js
+%%WWWDIR%%/j2s/J/shapespecial/Polyhedron.js
+%%WWWDIR%%/j2s/J/shapespecial/Vectors.js
+%%WWWDIR%%/j2s/J/shapesurface/Contact.js
+%%WWWDIR%%/j2s/J/shapesurface/Isosurface.js
+%%WWWDIR%%/j2s/J/shapesurface/IsosurfaceMesh.js
+%%WWWDIR%%/j2s/J/shapesurface/LcaoCartoon.js
+%%WWWDIR%%/j2s/J/shapesurface/MolecularOrbital.js
+%%WWWDIR%%/j2s/J/shapesurface/NBO.js
+%%WWWDIR%%/j2s/J/shapesurface/PMeshWriter.js
+%%WWWDIR%%/j2s/J/shapesurface/Plot3D.js
+%%WWWDIR%%/j2s/J/shapesurface/Pmesh.js
+%%WWWDIR%%/j2s/J/thread/AnimationThread.js
+%%WWWDIR%%/j2s/J/thread/HoverWatcherThread.js
+%%WWWDIR%%/j2s/J/thread/JmolThread.js
+%%WWWDIR%%/j2s/J/thread/MoveToThread.js
+%%WWWDIR%%/j2s/J/thread/SpinThread.js
+%%WWWDIR%%/j2s/J/thread/TimeoutThread.js
+%%WWWDIR%%/j2s/J/thread/VibrationThread.js
+%%WWWDIR%%/j2s/J/translation/PO.js
+%%WWWDIR%%/j2s/JM/AlphaMonomer.js
+%%WWWDIR%%/j2s/JM/AlphaPolymer.js
+%%WWWDIR%%/j2s/JM/AminoMonomer.js
+%%WWWDIR%%/j2s/JM/AminoPolymer.js
+%%WWWDIR%%/j2s/JM/Annotation.js
+%%WWWDIR%%/j2s/JM/Atom.js
+%%WWWDIR%%/j2s/JM/AtomCollection.js
+%%WWWDIR%%/j2s/JM/AtomIteratorWithinModel.js
+%%WWWDIR%%/j2s/JM/AtomIteratorWithinModelSet.js
+%%WWWDIR%%/j2s/JM/BasePair.js
+%%WWWDIR%%/j2s/JM/BioExt.js
+%%WWWDIR%%/j2s/JM/BioModel.js
+%%WWWDIR%%/j2s/JM/BioModelSet.js
+%%WWWDIR%%/j2s/JM/BioPolymer.js
+%%WWWDIR%%/j2s/JM/BioResolver.js
+%%WWWDIR%%/j2s/JM/Bond.js
+%%WWWDIR%%/j2s/JM/BondCollection.js
+%%WWWDIR%%/j2s/JM/BondIterator.js
+%%WWWDIR%%/j2s/JM/BondIteratorSelected.js
+%%WWWDIR%%/j2s/JM/BondSet.js
+%%WWWDIR%%/j2s/JM/CarbohydrateMonomer.js
+%%WWWDIR%%/j2s/JM/CarbohydratePolymer.js
+%%WWWDIR%%/j2s/JM/Chain.js
+%%WWWDIR%%/j2s/JM/FF/AtomType.js
+%%WWWDIR%%/j2s/JM/FF/Calculation.js
+%%WWWDIR%%/j2s/JM/FF/Calculations.js
+%%WWWDIR%%/j2s/JM/FF/CalculationsMMFF.js
+%%WWWDIR%%/j2s/JM/FF/CalculationsUFF.js
+%%WWWDIR%%/j2s/JM/FF/FFParam.js
+%%WWWDIR%%/j2s/JM/FF/ForceField.js
+%%WWWDIR%%/j2s/JM/FF/ForceFieldMMFF.js
+%%WWWDIR%%/j2s/JM/FF/ForceFieldUFF.js
+%%WWWDIR%%/j2s/JM/FF/MMFFAngleCalc.js
+%%WWWDIR%%/j2s/JM/FF/MMFFDistanceCalc.js
+%%WWWDIR%%/j2s/JM/FF/MMFFESCalc.js
+%%WWWDIR%%/j2s/JM/FF/MMFFOOPCalc.js
+%%WWWDIR%%/j2s/JM/FF/MMFFSBCalc.js
+%%WWWDIR%%/j2s/JM/FF/MMFFTorsionCalc.js
+%%WWWDIR%%/j2s/JM/FF/MMFFVDWCalc.js
+%%WWWDIR%%/j2s/JM/FF/UFFAngleCalc.js
+%%WWWDIR%%/j2s/JM/FF/UFFDistanceCalc.js
+%%WWWDIR%%/j2s/JM/FF/UFFOOPCalc.js
+%%WWWDIR%%/j2s/JM/FF/UFFTorsionCalc.js
+%%WWWDIR%%/j2s/JM/FF/UFFVDWCalc.js
+%%WWWDIR%%/j2s/JM/FF/data/MMFF94-smarts.txt
+%%WWWDIR%%/j2s/JM/FF/data/UFF.txt
+%%WWWDIR%%/j2s/JM/FF/data/mmff94.par.txt
+%%WWWDIR%%/j2s/JM/Group.js
+%%WWWDIR%%/j2s/JM/HBond.js
+%%WWWDIR%%/j2s/JM/Helix.js
+%%WWWDIR%%/j2s/JM/LabelToken.js
+%%WWWDIR%%/j2s/JM/MMConstraint.js
+%%WWWDIR%%/j2s/JM/Measurement.js
+%%WWWDIR%%/j2s/JM/MeasurementData.js
+%%WWWDIR%%/j2s/JM/MeasurementPending.js
+%%WWWDIR%%/j2s/JM/MinAngle.js
+%%WWWDIR%%/j2s/JM/MinAtom.js
+%%WWWDIR%%/j2s/JM/MinBond.js
+%%WWWDIR%%/j2s/JM/MinObject.js
+%%WWWDIR%%/j2s/JM/MinPosition.js
+%%WWWDIR%%/j2s/JM/MinTorsion.js
+%%WWWDIR%%/j2s/JM/MinimizationThread.js
+%%WWWDIR%%/j2s/JM/Minimizer.js
+%%WWWDIR%%/j2s/JM/Model.js
+%%WWWDIR%%/j2s/JM/ModelLoader.js
+%%WWWDIR%%/j2s/JM/ModelSet.js
+%%WWWDIR%%/j2s/JM/Monomer.js
+%%WWWDIR%%/j2s/JM/NucleicMonomer.js
+%%WWWDIR%%/j2s/JM/NucleicPolymer.js
+%%WWWDIR%%/j2s/JM/Orientation.js
+%%WWWDIR%%/j2s/JM/PhosphorusMonomer.js
+%%WWWDIR%%/j2s/JM/PhosphorusPolymer.js
+%%WWWDIR%%/j2s/JM/ProteinStructure.js
+%%WWWDIR%%/j2s/JM/Sheet.js
+%%WWWDIR%%/j2s/JM/StateScript.js
+%%WWWDIR%%/j2s/JM/Structure.js
+%%WWWDIR%%/j2s/JM/Text.js
+%%WWWDIR%%/j2s/JM/TickInfo.js
+%%WWWDIR%%/j2s/JM/Trajectory.js
+%%WWWDIR%%/j2s/JM/Turn.js
+%%WWWDIR%%/j2s/JM/Util.js
+%%WWWDIR%%/j2s/JS/AbstractButton.js
+%%WWWDIR%%/j2s/JS/AbstractTableModel.js
+%%WWWDIR%%/j2s/JS/BorderLayout.js
+%%WWWDIR%%/j2s/JS/ButtonGroup.js
+%%WWWDIR%%/j2s/JS/CIPChirality.js
+%%WWWDIR%%/j2s/JS/CIPData.js
+%%WWWDIR%%/j2s/JS/CIPDataSmiles.js
+%%WWWDIR%%/j2s/JS/CIPDataTracker.js
+%%WWWDIR%%/j2s/JS/Cell.js
+%%WWWDIR%%/j2s/JS/CmdExt.js
+%%WWWDIR%%/j2s/JS/Color.js
+%%WWWDIR%%/j2s/JS/ColumnSelectionModel.js
+%%WWWDIR%%/j2s/JS/CommandWatcherThread.js
+%%WWWDIR%%/j2s/JS/Component.js
+%%WWWDIR%%/j2s/JS/Container.js
+%%WWWDIR%%/j2s/JS/ContextToken.js
+%%WWWDIR%%/j2s/JS/Dimension.js
+%%WWWDIR%%/j2s/JS/Document.js
+%%WWWDIR%%/j2s/JS/FileLoadThread.js
+%%WWWDIR%%/j2s/JS/FlowLayout.js
+%%WWWDIR%%/j2s/JS/Grid.js
+%%WWWDIR%%/j2s/JS/GridBagConstraints.js
+%%WWWDIR%%/j2s/JS/GridBagLayout.js
+%%WWWDIR%%/j2s/JS/HTMLElement.js
+%%WWWDIR%%/j2s/JS/HTMLWindowEvent.js
+%%WWWDIR%%/j2s/JS/HallInfo.js
+%%WWWDIR%%/j2s/JS/HallRotation.js
+%%WWWDIR%%/j2s/JS/HallRotationTerm.js
+%%WWWDIR%%/j2s/JS/HallTranslation.js
+%%WWWDIR%%/j2s/JS/Insets.js
+%%WWWDIR%%/j2s/JS/InvalidSmilesException.js
+%%WWWDIR%%/j2s/JS/IsoExt.js
+%%WWWDIR%%/j2s/JS/JButton.js
+%%WWWDIR%%/j2s/JS/JCheckBox.js
+%%WWWDIR%%/j2s/JS/JCheckBoxMenuItem.js
+%%WWWDIR%%/j2s/JS/JComboBox.js
+%%WWWDIR%%/j2s/JS/JComponent.js
+%%WWWDIR%%/j2s/JS/JComponentImp.js
+%%WWWDIR%%/j2s/JS/JContentPane.js
+%%WWWDIR%%/j2s/JS/JDialog.js
+%%WWWDIR%%/j2s/JS/JEditorPane.js
+%%WWWDIR%%/j2s/JS/JLabel.js
+%%WWWDIR%%/j2s/JS/JMenu.js
+%%WWWDIR%%/j2s/JS/JMenuItem.js
+%%WWWDIR%%/j2s/JS/JPanel.js
+%%WWWDIR%%/j2s/JS/JPopupMenu.js
+%%WWWDIR%%/j2s/JS/JRadioButtonMenuItem.js
+%%WWWDIR%%/j2s/JS/JScrollPane.js
+%%WWWDIR%%/j2s/JS/JSplitPane.js
+%%WWWDIR%%/j2s/JS/JTable.js
+%%WWWDIR%%/j2s/JS/JTextField.js
+%%WWWDIR%%/j2s/JS/JTextPane.js
+%%WWWDIR%%/j2s/JS/LayoutManager.js
+%%WWWDIR%%/j2s/JS/ListSelectionModel.js
+%%WWWDIR%%/j2s/JS/MathExt.js
+%%WWWDIR%%/j2s/JS/PointGroup.js
+%%WWWDIR%%/j2s/JS/PolyhedronStereoSorter.js
+%%WWWDIR%%/j2s/JS/SV.js
+%%WWWDIR%%/j2s/JS/ScriptCompiler.js
+%%WWWDIR%%/j2s/JS/ScriptContext.js
+%%WWWDIR%%/j2s/JS/ScriptDelayThread.js
+%%WWWDIR%%/j2s/JS/ScriptError.js
+%%WWWDIR%%/j2s/JS/ScriptEval.js
+%%WWWDIR%%/j2s/JS/ScriptException.js
+%%WWWDIR%%/j2s/JS/ScriptExpr.js
+%%WWWDIR%%/j2s/JS/ScriptExt.js
+%%WWWDIR%%/j2s/JS/ScriptFlowContext.js
+%%WWWDIR%%/j2s/JS/ScriptFunction.js
+%%WWWDIR%%/j2s/JS/ScriptInterruption.js
+%%WWWDIR%%/j2s/JS/ScriptManager.js
+%%WWWDIR%%/j2s/JS/ScriptMathProcessor.js
+%%WWWDIR%%/j2s/JS/ScriptParallelProcessor.js
+%%WWWDIR%%/j2s/JS/ScriptParam.js
+%%WWWDIR%%/j2s/JS/ScriptProcess.js
+%%WWWDIR%%/j2s/JS/ScriptProcessRunnable.js
+%%WWWDIR%%/j2s/JS/ScriptQueueThread.js
+%%WWWDIR%%/j2s/JS/ScriptTokenParser.js
+%%WWWDIR%%/j2s/JS/SmilesAromatic.js
+%%WWWDIR%%/j2s/JS/SmilesAtom.js
+%%WWWDIR%%/j2s/JS/SmilesBond.js
+%%WWWDIR%%/j2s/JS/SmilesExt.js
+%%WWWDIR%%/j2s/JS/SmilesGenerator.js
+%%WWWDIR%%/j2s/JS/SmilesMatcher.js
+%%WWWDIR%%/j2s/JS/SmilesMeasure.js
+%%WWWDIR%%/j2s/JS/SmilesParser.js
+%%WWWDIR%%/j2s/JS/SmilesRing.js
+%%WWWDIR%%/j2s/JS/SmilesRingSet.js
+%%WWWDIR%%/j2s/JS/SmilesSearch.js
+%%WWWDIR%%/j2s/JS/SmilesStereo.js
+%%WWWDIR%%/j2s/JS/SpaceGroup.js
+%%WWWDIR%%/j2s/JS/SwingConstants.js
+%%WWWDIR%%/j2s/JS/SwingController.js
+%%WWWDIR%%/j2s/JS/Symmetry.js
+%%WWWDIR%%/j2s/JS/SymmetryDesc.js
+%%WWWDIR%%/j2s/JS/SymmetryInfo.js
+%%WWWDIR%%/j2s/JS/SymmetryOperation.js
+%%WWWDIR%%/j2s/JS/T.js
+%%WWWDIR%%/j2s/JS/TableCellRenderer.js
+%%WWWDIR%%/j2s/JS/TableColumn.js
+%%WWWDIR%%/j2s/JS/UnitCell.js
+%%WWWDIR%%/j2s/JS/UnitCellIterator.js
+%%WWWDIR%%/j2s/JS/VTemp.js
+%%WWWDIR%%/j2s/JSV/api/AnnotationData.js
+%%WWWDIR%%/j2s/JSV/api/AppletFrame.js
+%%WWWDIR%%/j2s/JSV/api/ExportInterface.js
+%%WWWDIR%%/j2s/JSV/api/JSVAppInterface.js
+%%WWWDIR%%/j2s/JSV/api/JSVAppletInterface.js
+%%WWWDIR%%/j2s/JSV/api/JSVExporter.js
+%%WWWDIR%%/j2s/JSV/api/JSVFileDropper.js
+%%WWWDIR%%/j2s/JSV/api/JSVFileHelper.js
+%%WWWDIR%%/j2s/JSV/api/JSVMainPanel.js
+%%WWWDIR%%/j2s/JSV/api/JSVPanel.js
+%%WWWDIR%%/j2s/JSV/api/JSVPdfWriter.js
+%%WWWDIR%%/j2s/JSV/api/JSVPrintDialog.js
+%%WWWDIR%%/j2s/JSV/api/JSVTree.js
+%%WWWDIR%%/j2s/JSV/api/JSVTreeNode.js
+%%WWWDIR%%/j2s/JSV/api/JSVTreePath.js
+%%WWWDIR%%/j2s/JSV/api/JSVViewPanel.js
+%%WWWDIR%%/j2s/JSV/api/JSVZipInterface.js
+%%WWWDIR%%/j2s/JSV/api/JSVZipReader.js
+%%WWWDIR%%/j2s/JSV/api/PanelListener.js
+%%WWWDIR%%/j2s/JSV/api/PlatformDialog.js
+%%WWWDIR%%/j2s/JSV/api/ScriptInterface.js
+%%WWWDIR%%/j2s/JSV/api/SourceReader.js
+%%WWWDIR%%/j2s/JSV/api/VisibleInterface.js
+%%WWWDIR%%/j2s/JSV/api/js/JSVAppletObject.js
+%%WWWDIR%%/j2s/JSV/api/js/JSVToJSmolInterface.js
+%%WWWDIR%%/j2s/JSV/app/GenericMouse.js
+%%WWWDIR%%/j2s/JSV/app/JSVApp.js
+%%WWWDIR%%/j2s/JSV/app/JSVAppPro.js
+%%WWWDIR%%/j2s/JSV/appletjs/JSVApplet.js
+%%WWWDIR%%/j2s/JSV/appletjs/JSVAppletPro.js
+%%WWWDIR%%/j2s/JSV/common/Annotation.js
+%%WWWDIR%%/j2s/JSV/common/ColorParameters.js
+%%WWWDIR%%/j2s/JSV/common/ColoredAnnotation.js
+%%WWWDIR%%/j2s/JSV/common/CoordComparator.js
+%%WWWDIR%%/j2s/JSV/common/Coordinate.js

*** DIFF OUTPUT TRUNCATED AT 1000 LINES ***



Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202005272031.04RKVOim037320>