From owner-svn-ports-head@FreeBSD.ORG Sat Feb 23 04:50:50 2013 Return-Path: Delivered-To: svn-ports-head@freebsd.org Received: from mx1.freebsd.org (mx1.FreeBSD.org [8.8.178.115]) by hub.freebsd.org (Postfix) with ESMTP id 26939CC0; Sat, 23 Feb 2013 04:50:50 +0000 (UTC) (envelope-from danfe@FreeBSD.org) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) by mx1.freebsd.org (Postfix) with ESMTP id EF1C5BE9; Sat, 23 Feb 2013 04:50:49 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.5/8.14.5) with ESMTP id r1N4onvi056304; Sat, 23 Feb 2013 04:50:49 GMT (envelope-from danfe@svn.freebsd.org) Received: (from danfe@localhost) by svn.freebsd.org (8.14.5/8.14.5/Submit) id r1N4omd8056294; Sat, 23 Feb 2013 04:50:48 GMT (envelope-from danfe@svn.freebsd.org) Message-Id: <201302230450.r1N4omd8056294@svn.freebsd.org> From: Alexey Dokuchaev Date: Sat, 23 Feb 2013 04:50:48 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r312798 - in head/biology: . ugene ugene/files X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 23 Feb 2013 04:50:50 -0000 Author: danfe Date: Sat Feb 23 04:50:48 2013 New Revision: 312798 URL: http://svnweb.freebsd.org/changeset/ports/312798 Log: Add Unipro UGENE, a free open-source crowss-platform bioinformatics software. PR: ports/173387 Submitted by: Hannes Hauswedell Added: head/biology/ugene/ head/biology/ugene/Makefile (contents, props changed) head/biology/ugene/distinfo (contents, props changed) head/biology/ugene/files/ head/biology/ugene/files/patch-src-corelibs-U2Private-src-CrashHandler.cpp (contents, props changed) head/biology/ugene/pkg-descr (contents, props changed) head/biology/ugene/pkg-plist (contents, props changed) Modified: head/biology/Makefile Modified: head/biology/Makefile ============================================================================== --- head/biology/Makefile Sat Feb 23 04:30:20 2013 (r312797) +++ head/biology/Makefile Sat Feb 23 04:50:48 2013 (r312798) @@ -94,6 +94,7 @@ SUBDIR += tinker SUBDIR += treepuzzle SUBDIR += treeviewx + SUBDIR += ugene SUBDIR += velvet SUBDIR += wise SUBDIR += xdrawchem Added: head/biology/ugene/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/ugene/Makefile Sat Feb 23 04:50:48 2013 (r312798) @@ -0,0 +1,48 @@ +# Created by: Hannes Hauswedell +# $FreeBSD$ + +PORTNAME= ugene +DISTVERSION= 1.11.4 +CATEGORIES= biology +MASTER_SITES= http://ugene.unipro.ru/downloads/ + +MAINTAINER= h2+fbsdports@fsfe.org +COMMENT= Free, open-source, cross-platform bioinformatics toolkit + +LICENSE= GPLv2 + +LIB_DEPENDS= execinfo:${PORTSDIR}/devel/libexecinfo +RUN_DEPENDS= bash:${PORTSDIR}/shells/bash + +USE_GL= glu +USE_QT4= gui webkit xml svg linguist_build moc_build qmake_build \ + qtestlib_build rcc_build uic_build imageformats_run +USE_XORG= xtst + +USE_LDCONFIG= yes +INSTALLS_ICONS= yes +MAKE_JOBS_SAFE= yes + +MAN1= ${PORTNAME}.1 +MANCOMPRESSED= yes + +.include + +.if ${ARCH} == "amd64" +# need to manually tell the build we are on x64 +CARCH= CONFIG+=x64 +.endif + +# yes, bash is required, stuff will not execute with sh +post-patch: + @${REINPLACE_CMD} -e 's|/bin/bash|/usr/bin/env bash|' \ + ${WRKSRC}/src/gen_bin_script.cmd \ + ${WRKSRC}/installer/_common_data/ugene + +do-configure: + @cd ${CONFIGURE_WRKSRC} && ${SETENV} ${CONFIGURE_ENV} ${QMAKE} \ + PREFIX=${PREFIX} INSTALL_PREFIX=${PREFIX} \ + INSTALL_MANDIR=${MAN1PREFIX}/man ${CARCH} \ + UGENE_INSTALL_DATA=${DATADIR} -r ${PORTNAME}.pro + +.include Added: head/biology/ugene/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/ugene/distinfo Sat Feb 23 04:50:48 2013 (r312798) @@ -0,0 +1,2 @@ +SHA256 (ugene-1.11.4.tar.gz) = 5b9b914e7ef5a3d3658f3346cccdb5cd6583b03db3b7bed7e163cb5cfd5663fa +SIZE (ugene-1.11.4.tar.gz) = 14761290 Added: head/biology/ugene/files/patch-src-corelibs-U2Private-src-CrashHandler.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/ugene/files/patch-src-corelibs-U2Private-src-CrashHandler.cpp Sat Feb 23 04:50:48 2013 (r312798) @@ -0,0 +1,20 @@ +--- ./src/corelibs/U2Private/src/CrashHandler.cpp.old 2012-10-30 15:36:22.000000000 +0100 ++++ ./src/corelibs/U2Private/src/CrashHandler.cpp 2012-10-30 15:47:47.000000000 +0100 +@@ -253,7 +253,7 @@ + } + //handler = AddVectoredExceptionHandler(1, CrashHandlerFunc); + +-#elif defined( Q_OS_MAC) ++#elif defined( Q_OS_MAC ) || defined ( Q_OS_FREEBSD ) + return; //TODO: implement crash hander for MAC OS + #else + stack_t sigstk; +@@ -284,7 +284,7 @@ + void CrashHandler::runMonitorProcess(const QString &exceptionType) { + QString path = QCoreApplication::applicationDirPath() + "/ugenem"; + +-#ifndef Q_OS_WIN ++#if !defined ( Q_OS_WIN ) && !defined ( Q_OS_FREEBSD ) + char pid_buf[30]; + sprintf(pid_buf, "%d", getpid()); + char name_buf[512]; Added: head/biology/ugene/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/ugene/pkg-descr Sat Feb 23 04:50:48 2013 (r312798) @@ -0,0 +1,12 @@ +Unipro UGENE is a multiplatform open-source software with the main goal of +assisting molecular biologists without much expertise in bioinformatics to +manage, analyze and visualize their data. UGENE integrates widely used +bioinformatics tools within a common user interface. + +The toolkit supports multiple biological data formats and allows the +retrieval of data from remote data sources. It provides visualization +modules for biological objects such as annotated genome sequences, Next +Generation Sequencing (NGS) assembly data, multiple sequence alignments, +phylogenetic trees and 3D structures. + +WWW: http://ugene.unipro.ru/ Added: head/biology/ugene/pkg-plist ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/ugene/pkg-plist Sat Feb 23 04:50:48 2013 (r312798) @@ -0,0 +1,1135 @@ +bin/ugene +lib/ugene/libU2Algorithm.so +lib/ugene/libU2Core.so +lib/ugene/libU2Designer.so +lib/ugene/libU2Formats.so +lib/ugene/libU2Gui.so +lib/ugene/libU2Lang.so +lib/ugene/libU2Private.so +lib/ugene/libU2Remote.so +lib/ugene/libU2Test.so +lib/ugene/libU2View.so +lib/ugene/libgtest.so +lib/ugene/libugenedb.so +lib/ugene/plugins/CoreTests.license +lib/ugene/plugins/CoreTests.plugin +lib/ugene/plugins/GUITestBase.license +lib/ugene/plugins/GUITestBase.plugin +lib/ugene/plugins/annotator.license +lib/ugene/plugins/annotator.plugin +lib/ugene/plugins/api_tests.license +lib/ugene/plugins/api_tests.plugin +lib/ugene/plugins/ball.license +lib/ugene/plugins/ball.plugin +lib/ugene/plugins/biostruct3d_view.license +lib/ugene/plugins/biostruct3d_view.plugin +lib/ugene/plugins/chroma_view.license +lib/ugene/plugins/chroma_view.plugin +lib/ugene/plugins/circular_view.license +lib/ugene/plugins/circular_view.plugin +lib/ugene/plugins/dbi_bam.license +lib/ugene/plugins/dbi_bam.plugin +lib/ugene/plugins/dna_export.license +lib/ugene/plugins/dna_export.plugin +lib/ugene/plugins/dna_flexibility.license +lib/ugene/plugins/dna_flexibility.plugin +lib/ugene/plugins/dna_graphpack.license +lib/ugene/plugins/dna_graphpack.plugin +lib/ugene/plugins/dna_stat.license +lib/ugene/plugins/dna_stat.plugin +lib/ugene/plugins/dotplot.license +lib/ugene/plugins/dotplot.plugin +lib/ugene/plugins/enzymes.license +lib/ugene/plugins/enzymes.plugin +lib/ugene/plugins/expert_discovery.license +lib/ugene/plugins/expert_discovery.plugin +lib/ugene/plugins/external_tool_support.license +lib/ugene/plugins/external_tool_support.plugin +lib/ugene/plugins/genome_aligner.license +lib/ugene/plugins/genome_aligner.plugin +lib/ugene/plugins/gor4.license +lib/ugene/plugins/gor4.plugin +lib/ugene/plugins/hmm2.license +lib/ugene/plugins/hmm2.plugin +lib/ugene/plugins/kalign.license +lib/ugene/plugins/kalign.plugin +lib/ugene/plugins/libCoreTests.so +lib/ugene/plugins/libGUITestBase.so +lib/ugene/plugins/libannotator.so +lib/ugene/plugins/libapi_tests.so +lib/ugene/plugins/libball.so +lib/ugene/plugins/libbiostruct3d_view.so +lib/ugene/plugins/libchroma_view.so +lib/ugene/plugins/libcircular_view.so +lib/ugene/plugins/libdbi_bam.so +lib/ugene/plugins/libdna_export.so +lib/ugene/plugins/libdna_flexibility.so +lib/ugene/plugins/libdna_graphpack.so +lib/ugene/plugins/libdna_stat.so +lib/ugene/plugins/libdotplot.so +lib/ugene/plugins/libenzymes.so +lib/ugene/plugins/libexpert_discovery.so +lib/ugene/plugins/libexternal_tool_support.so +lib/ugene/plugins/libgenome_aligner.so +lib/ugene/plugins/libgor4.so +lib/ugene/plugins/libhmm2.so +lib/ugene/plugins/libkalign.so +lib/ugene/plugins/libopencl_support.so +lib/ugene/plugins/liborf_marker.so +lib/ugene/plugins/libperf_monitor.so +lib/ugene/plugins/libphylip.so +lib/ugene/plugins/libprimer3.so +lib/ugene/plugins/libpsipred.so +lib/ugene/plugins/libptools.so +lib/ugene/plugins/libquery_designer.so +lib/ugene/plugins/libremote_blast.so +lib/ugene/plugins/libremote_service.so +lib/ugene/plugins/librepeat_finder.so +lib/ugene/plugins/libsitecon.so +lib/ugene/plugins/libsmith_waterman.so +lib/ugene/plugins/libtest_runner.so +lib/ugene/plugins/libweight_matrix.so +lib/ugene/plugins/libworkflow_designer.so +lib/ugene/plugins/opencl_support.license +lib/ugene/plugins/opencl_support.plugin +lib/ugene/plugins/orf_marker.license +lib/ugene/plugins/orf_marker.plugin +lib/ugene/plugins/perf_monitor.license +lib/ugene/plugins/perf_monitor.plugin +lib/ugene/plugins/phylip.license +lib/ugene/plugins/phylip.plugin +lib/ugene/plugins/primer3.license +lib/ugene/plugins/primer3.plugin +lib/ugene/plugins/psipred.license +lib/ugene/plugins/psipred.plugin +lib/ugene/plugins/ptools.license +lib/ugene/plugins/ptools.plugin +lib/ugene/plugins/query_designer.license +lib/ugene/plugins/query_designer.plugin +lib/ugene/plugins/remote_blast.license +lib/ugene/plugins/remote_blast.plugin +lib/ugene/plugins/remote_service.license +lib/ugene/plugins/remote_service.plugin +lib/ugene/plugins/repeat_finder.license +lib/ugene/plugins/repeat_finder.plugin +lib/ugene/plugins/sitecon.license +lib/ugene/plugins/sitecon.plugin +lib/ugene/plugins/smith_waterman.license +lib/ugene/plugins/smith_waterman.plugin +lib/ugene/plugins/test_runner.license +lib/ugene/plugins/test_runner.plugin +lib/ugene/plugins/weight_matrix.license +lib/ugene/plugins/weight_matrix.plugin +lib/ugene/plugins/workflow_designer.license +lib/ugene/plugins/workflow_designer.plugin +lib/ugene/transl_cs.qm +lib/ugene/transl_en.qm +lib/ugene/transl_ru.qm +lib/ugene/transl_zh.qm +lib/ugene/ugene +lib/ugene/ugenecl +lib/ugene/ugenem +lib/ugene/ugeneui +share/applications/ugene.desktop +share/pixmaps/ugene.png +share/pixmaps/ugene.xpm +%%DATADIR%%/DBXRefRegistry.txt +%%DATADIR%%/back_translation/Bacteria/Arthrobacter_aurescens_TC1.cut +%%DATADIR%%/back_translation/Bacteria/Bacillus_subtilis.cut +%%DATADIR%%/back_translation/Bacteria/Escherichia_coli.cut +%%DATADIR%%/back_translation/Bacteria/Haemophilus_influenzae.cut +%%DATADIR%%/back_translation/Bacteria/Helicobacter_pylori.cut +%%DATADIR%%/back_translation/Bacteria/Listeria_monocytogenes.cut +%%DATADIR%%/back_translation/Bacteria/Neisseria_meningitidis.cut +%%DATADIR%%/back_translation/Bacteria/Salmonella_typhimurium_LT2.cut +%%DATADIR%%/back_translation/Bacteria/Streptomyces_coelicolor_A3(2).cut +%%DATADIR%%/back_translation/Bacteria/Sulfolobus_solfataricus_P2.cut +%%DATADIR%%/back_translation/Invertebrates/Apis_mellifera_(honey_bee).cut +%%DATADIR%%/back_translation/Invertebrates/Caenorhabditis_elegans.cut +%%DATADIR%%/back_translation/Invertebrates/Drosophila_melanogaster_(fruit_fly).cut +%%DATADIR%%/back_translation/Invertebrates/Plasmodium_falciparum_(malaria_parasite_P._falciparum).cut +%%DATADIR%%/back_translation/Invertebrates/mitochondrion_Caenorhabditis_elegans.cut +%%DATADIR%%/back_translation/Invertebrates/mitochondrion_Drosophila_melanogaster_(fruit_fly).cut +%%DATADIR%%/back_translation/Mammalia/Bos_taurus_(cow).cut +%%DATADIR%%/back_translation/Mammalia/Canis_familiaris_(dog).cut +%%DATADIR%%/back_translation/Mammalia/Sus_scrofa_(pig).cut +%%DATADIR%%/back_translation/Mammalia/mitochondrion_Bos_taurus_(cow).cut +%%DATADIR%%/back_translation/Mammalia/mitochondrion_Sus_scrofa_(pig).cut +%%DATADIR%%/back_translation/Plants/Arabidopsis_thaliana_(thale_cress).cut +%%DATADIR%%/back_translation/Plants/Oryza_sativa.cut +%%DATADIR%%/back_translation/Plants/Zea_mays.cut +%%DATADIR%%/back_translation/Primates/Homo_sapiens_(human).cut +%%DATADIR%%/back_translation/Primates/Pan_troglodytes_(chimpanzee).cut +%%DATADIR%%/back_translation/Primates/mitochondrion_Homo_sapiens_(human).cut +%%DATADIR%%/back_translation/Primates/mitochondrion_Pan_troglodytes_(chimpanzee).cut +%%DATADIR%%/back_translation/Rodents/Mus_musculus_(house_mouse).cut +%%DATADIR%%/back_translation/Rodents/Rattus_norvegicus_(Norway_rat).cut +%%DATADIR%%/back_translation/Vertebrates/Gallus_gallus_(chicken).cut +%%DATADIR%%/back_translation/Vertebrates/Takifugu_rubripes_(Fugu_rubripes).cut +%%DATADIR%%/back_translation/Vertebrates/Xenopus_laevis_(African_clawed_frog).cut +%%DATADIR%%/back_translation/Vertebrates/mitochondrion_Gallus_gallus_(chicken).cut +%%DATADIR%%/back_translation/Vertebrates/mitochondrion_Takifugu_rubripes_(Fugu_rubripes).cut +%%DATADIR%%/back_translation/Viruses/Human_immunodeficiency_virus_1_(HIV-1).cut +%%DATADIR%%/back_translation/Viruses/Influenza_A_virus.cut +%%DATADIR%%/back_translation/Yeast/Saccharomyces_cerevisiae_(baker's_yeast).cut +%%DATADIR%%/back_translation/tables.xml +%%DATADIR%%/biostruct3d_plugin/BioStruct3DLinks.txt +%%DATADIR%%/cmdline/align-clustalw.uwl +%%DATADIR%%/cmdline/align-kalign.uwl +%%DATADIR%%/cmdline/align-mafft.uwl +%%DATADIR%%/cmdline/align-tcoffee.uwl +%%DATADIR%%/cmdline/align.uwl +%%DATADIR%%/cmdline/bowtie-build.uwl +%%DATADIR%%/cmdline/bowtie.uwl +%%DATADIR%%/cmdline/convert-msa.uwl +%%DATADIR%%/cmdline/convert-seq.uwl +%%DATADIR%%/cmdline/extract-sequence.uwl +%%DATADIR%%/cmdline/fetch-sequence.uwl +%%DATADIR%%/cmdline/fetch.uwl +%%DATADIR%%/cmdline/find-orfs.uwl +%%DATADIR%%/cmdline/find-repeats.uwl +%%DATADIR%%/cmdline/find-sw.uwl +%%DATADIR%%/cmdline/generate-dna.uwl +%%DATADIR%%/cmdline/hmm2-build.uwl +%%DATADIR%%/cmdline/hmm2-search.uwl +%%DATADIR%%/cmdline/join-quality.uwl +%%DATADIR%%/cmdline/local-blast+.uwl +%%DATADIR%%/cmdline/local-blast.uwl +%%DATADIR%%/cmdline/pfm-build.uwl +%%DATADIR%%/cmdline/pfm-search.uwl +%%DATADIR%%/cmdline/pwm-build.uwl +%%DATADIR%%/cmdline/pwm-search.uwl +%%DATADIR%%/cmdline/query.uwl +%%DATADIR%%/cmdline/remote-request.uwl +%%DATADIR%%/cmdline/revcompl.uwl +%%DATADIR%%/cmdline/sitecon-build.uwl +%%DATADIR%%/cmdline/sitecon-search.uwl +%%DATADIR%%/enzymes/rebase_v003_all.bairoch.gz +%%DATADIR%%/enzymes/rebase_v003_t2_com.bairoch.gz +%%DATADIR%%/license +%%DATADIR%%/position_weight_matrix/JASPAR/all_jaspar.csv +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0265.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0266.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0267.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0268.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0269.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0270.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0271.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0272.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0273.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0274.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0275.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0276.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0277.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0278.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0279.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0280.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0281.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0282.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0283.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0284.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0285.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0286.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0287.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0288.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0289.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0290.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0291.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0292.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0293.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0294.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0295.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0296.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0297.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0298.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0299.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0300.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0301.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0302.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0303.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0304.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0305.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0306.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0307.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0308.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0309.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0310.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0311.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0312.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0313.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0314.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0315.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0316.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0317.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0318.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0319.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0320.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0321.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0322.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0323.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0324.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0325.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0326.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0327.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0328.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0329.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0330.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0331.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0332.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0333.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0334.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0335.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0336.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0337.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0338.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0339.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0340.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0341.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0342.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0343.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0344.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0345.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0346.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0347.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0348.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0349.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0350.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0351.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0352.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0353.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0354.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0355.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0356.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0357.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0358.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0359.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0360.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0361.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0362.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0363.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0364.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0365.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0366.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0367.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0368.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0369.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0370.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0371.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0372.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0373.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0374.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0375.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0376.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0377.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0378.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0379.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0380.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0381.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0382.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0383.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0384.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0385.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0386.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0387.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0388.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0389.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0390.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0391.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0392.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0393.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0394.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0395.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0396.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0397.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0398.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0399.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0400.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0401.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0402.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0403.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0404.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0405.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0406.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0407.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0408.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0409.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0410.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0411.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0412.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0413.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0414.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0415.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0416.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0417.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0418.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0419.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0420.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0421.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0422.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0423.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0424.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0425.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0426.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0427.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0428.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0429.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0430.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0431.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0432.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0433.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0434.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0435.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0436.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0437.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0438.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0439.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0440.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/MA0441.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/fungi/matrix_list.txt +%%DATADIR%%/position_weight_matrix/JASPAR/insects/matrix_list.txt +%%DATADIR%%/position_weight_matrix/JASPAR/nematodes/MA0260.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/nematodes/MA0261.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/nematodes/MA0262.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/nematodes/MA0263.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/nematodes/MA0264.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/nematodes/matrix_list.txt +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0001.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0005.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0008.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0020.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0021.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0034.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0044.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0045.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0053.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0054.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0064.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0082.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0096.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0097.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0110.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0120.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0121.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0123.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0127.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0128.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/MA0129.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/plants/matrix_list.txt +%%DATADIR%%/position_weight_matrix/JASPAR/urochordates/MA0118.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/urochordates/matrix_list.txt +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0002.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0003.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0004.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0006.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0007.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0009.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0014.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0017.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0018.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0019.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0024.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0025.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0027.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0028.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0029.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0030.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0031.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0032.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0033.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0035.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0036.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0037.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0038.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0039.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0040.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0041.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0042.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0043.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0046.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0047.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0048.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0050.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0051.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0052.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0055.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0056.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0057.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0058.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0059.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0060.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0061.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0062.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0063.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0065.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0066.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0067.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0068.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0069.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0070.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0071.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0072.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0073.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0074.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0075.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0076.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0077.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0078.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0079.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0080.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0081.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0083.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0084.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0087.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0088.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0089.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0090.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0091.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0092.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0093.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0095.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0098.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0099.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0100.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0101.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0102.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0103.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0104.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0105.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0106.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0107.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0108.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0109.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0111.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0112.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0113.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0114.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0115.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0116.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0117.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0119.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0122.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0124.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0125.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0130.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0131.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0132.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0133.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0135.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0136.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0137.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0138.2.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0139.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0140.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0141.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0142.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0143.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0144.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0145.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0146.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0147.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0148.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0149.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0150.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0151.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0152.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0153.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0154.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0155.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0156.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0157.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0158.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0159.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0160.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0161.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0162.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0163.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0164.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0258.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0259.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/MA0442.1.pfm +%%DATADIR%%/position_weight_matrix/JASPAR/vertebrates/matrix_list.txt +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Alx3_3418.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Alx4_1744.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Arx_1738.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Bapx1_2343.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Barhl1_2590.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Barhl2_3868.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Barx1_2877.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Barx2_3447.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Bsx_3483.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cart1_0997.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cart1_1275.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cdx1_2245.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cdx2_4272.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cphx_3484.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Crx_3485.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cutl1_3494.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Cutl1_3494.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dbx1_3486.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dbx2_3487.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dlx1_1741.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dlx2_2273.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dlx3_1030.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dlx4_3488.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dlx5_3419.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dmbx1_2277.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dobox4_3956.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Dobox5_3493.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Duxl_1286.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Emx2_3420.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/En1_3123.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/En2_0952.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Esx1_3124.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Evx1_3952.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Evx2_2645.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Gbx1_2883.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Gbx2_3110.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Gsc_2327.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Gsh2_3990.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hdx_3845.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hlx1_2350.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hlxb9_3422.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hmbox1_2674.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hmx1_3423.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hmx2_3424.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hmx3_3490.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Homez_1063.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa10_2318.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa11_2218.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa13_3126.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa1_3425.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa2_3079.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa3_2783.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa4_3426.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa5_3415.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa6_1040.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa7_2668.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa7_3750.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxa9_2622.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb13_3479.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb3_1720.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb4_2627.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb5_3122.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb6_3428.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb7_3953.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb8_3780.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxb9_3413.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc10_2779.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc11_3718.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc12_3480.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc13_3127.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc4_3491.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc5_2630.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc6_3954.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc8_3429.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxc9_2367.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd10_2368.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd11_3873.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd12_3481.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd13_2356.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd1_3448.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd3_1742.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Hoxd8_2644.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Ipf1_3815.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Irx2_0900.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Irx3_0920.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Irx3_2226.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Irx4_2242.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Irx5_2385.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Irx6_2623.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Isl2_3430.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Isx_3445.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lbx2_3869.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx1_2240.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx2_0953.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx3_3431.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx4_1719.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx5_2279.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx6_2272.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx6_3432.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx8_2247.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lhx9_3492.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lmx1a_2238.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Lmx1b_3433.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Meis1_2335.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Meox1_2310.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Mrg1_2246.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Mrg2_2302.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Msx1_3031.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Msx2_3449.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Msx3_3206.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx1-1_3856.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx1-2_3214.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx2-2_2823.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx2-3_3435.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx2-4_3074.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx2-5_3436.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx2-6_3437.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx2-9_3082.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx3-1_2923.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx6-1_2825.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx6-1_2825.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Nkx6-3_3446.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Obox1_3970.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Obox2_3438.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Obox3_3439.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Obox5_2284.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Obox5_3963.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Obox6_3440.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Og2x_3719.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Otp_3496.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Otx1_2325.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Otx2_3441.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pax4_3989.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pax6_3838.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pax7_3783.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pbx1_3203.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Phox2a_3947.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Phox2b_3948.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pitx1_2312.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pitx2_2274.3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pitx3_3497.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pknox1_2364.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pknox2_3077.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou1f1_3818.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou2f1_3081.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou2f2_3748.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou2f3_3986.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou3f1_3819.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou3f2_2824.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou3f3_3235.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou3f4_3773.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou4f3_2791.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou6f1_1731.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Pou6f1_3733.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Prop1_3949.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Prrx1_3442.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Prrx2_3072.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Rax_3443.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Rhox11_1765.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Rhox11_2205.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Rhox6_4251.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Shox2_2641.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Six1_0935.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Six2_2307.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Six3_1732.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Six4_2860.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Six6_2267.4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Six6_2267.5.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Tcf1_2666.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Tcf2_0913.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Tgif1_2342.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Tgif2_3451.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Titf1_1722.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Tlx2_3498.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Uncx4.1_2281.2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Vax1_3499.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Vax2_3500.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/Cell08/Vsx1_1728.1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Aft1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Aro80.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Asg1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Bas1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Cbf1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Cep3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Cha4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Cup9.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ecm22.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Fhl1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Fkh1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Fkh2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gal4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gat1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gat3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gat4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gcn4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gln3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gsm1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Gzf3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Hal9.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Leu3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Lys14.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Matalpha2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Mbp1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Mcm1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Met32.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Mga1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Mig1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Mig2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Mig3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ndt80.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Nhp6a.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Nhp6b.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Nrg1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Oaf1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Pbf1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Pbf2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Pdr1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Phd1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Pho2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Pho4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Put3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rap1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rdr1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rds1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rds2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rgt1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rph1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rpn4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rsc3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rsc30.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Rtg3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Sfl1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Sfp1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Sip4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Skn7.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Smp1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Spt15.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Srd1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Stb3.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Stp2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Stp4.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Sum1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Sut2.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Tbf1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Tbs1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Tea1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Tec1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Tye7.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ume6.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Usv1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Xbp1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yap1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yap6.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ybr239c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ydr520c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yer130c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ygr067c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ykl222c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yll054c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yml081w.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ynr063w.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yox1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ypr013c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ypr015c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Ypr196w.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yrm1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/GR09/Yrr1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/NBT06/Cbf1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/NBT06/Ceh-22.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/NBT06/Oct-1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/NBT06/Rap1.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/NBT06/Zif268.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/PNAS08/Cgd2_3490.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/PNAS08/PF14_0633.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/PNAS08/PFF0200c.pwm +%%DATADIR%%/position_weight_matrix/UniPROBE/all_uniprobe.csv +%%DATADIR%%/primer3/drosophila.w.transposons.txt +%%DATADIR%%/primer3/humrep_and_simple.txt +%%DATADIR%%/primer3/rodent_ref.txt +%%DATADIR%%/primer3/rodrep_and_simple.txt +%%DATADIR%%/query_samples/RepeatsWithORF.uql +%%DATADIR%%/query_samples/SimpleGene.uql +%%DATADIR%%/samples/ABIF/A01.abi +%%DATADIR%%/samples/ACE/BL060C3.ace +%%DATADIR%%/samples/ACE/K26.ace +%%DATADIR%%/samples/Assembly/chrM.fa +%%DATADIR%%/samples/Assembly/chrM.sam +%%DATADIR%%/samples/Assembly/chrM.sorted.bam +%%DATADIR%%/samples/CLUSTALW/COI.aln +%%DATADIR%%/samples/CLUSTALW/HIV-1.aln +%%DATADIR%%/samples/CLUSTALW/ty3.aln.gz +%%DATADIR%%/samples/EMBL/AF177870.emb +%%DATADIR%%/samples/EMBL/AL000263.emb +%%DATADIR%%/samples/FASTA/human_T1.fa +%%DATADIR%%/samples/FASTQ/eas.fastq +%%DATADIR%%/samples/GFF/5prime_utr_intron_A20.gff +%%DATADIR%%/samples/GFF/5prime_utr_intron_A21.gff +%%DATADIR%%/samples/Genbank/CVU55762.gb +%%DATADIR%%/samples/Genbank/NC_014267.1.gb +%%DATADIR%%/samples/Genbank/PBR322.gb +%%DATADIR%%/samples/Genbank/murine.gb +%%DATADIR%%/samples/Genbank/sars.gb +%%DATADIR%%/samples/HMM/aligment15900.hmm +%%DATADIR%%/samples/MMDB/1CRN.prt +%%DATADIR%%/samples/MMDB/2JQS.prt +%%DATADIR%%/samples/MSF/HMA.msf +%%DATADIR%%/samples/MSF/lipid8.msf +%%DATADIR%%/samples/MSF/pla2_20.msf +%%DATADIR%%/samples/Newick/COI.nwk +%%DATADIR%%/samples/PDB/1CF7.PDB +%%DATADIR%%/samples/PDB/1CRN.PDB +%%DATADIR%%/samples/PDB/3INS.PDB +%%DATADIR%%/samples/Raw/raw.seq +%%DATADIR%%/samples/SCF/90-JRI-07.scf +%%DATADIR%%/samples/Stockholm/CBS.sto +%%DATADIR%%/samples/Stockholm/UPSK.sto +%%DATADIR%%/samples/Swiss-Prot/D0VTW9.txt +%%DATADIR%%/samples/Swiss-Prot/P01375.txt +%%DATADIR%%/samples/Swiss-Prot/P16152.txt +%%DATADIR%%/sitecon_models/eukaryotic/CEBP_a.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/CEBPall.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/CLOCK.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/CRE.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/E2F1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/E2F1DP1sel1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/EGR1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/Eklf.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/GATA1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/GATA_ALL.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/Gata2.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/Gata3.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/HMG1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/HNF1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/HNF3_4.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/HNF4.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/MYOGsel3.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/MyoD.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/NF1.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/NFATp.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/NFkB_all.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/NFkB_hetero.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/NFkB_homo.sitecon.gz +%%DATADIR%%/sitecon_models/eukaryotic/Nf_e2.sitecon.gz *** DIFF OUTPUT TRUNCATED AT 1000 LINES ***