From owner-svn-ports-all@freebsd.org  Sat Jun 11 09:25:05 2016
Return-Path: <owner-svn-ports-all@freebsd.org>
Delivered-To: svn-ports-all@mailman.ysv.freebsd.org
Received: from mx1.freebsd.org (mx1.freebsd.org
 [IPv6:2001:1900:2254:206a::19:1])
 by mailman.ysv.freebsd.org (Postfix) with ESMTP id CB4D2AD9E9D;
 Sat, 11 Jun 2016 09:25:05 +0000 (UTC)
 (envelope-from olivierd@FreeBSD.org)
Received: from repo.freebsd.org (repo.freebsd.org
 [IPv6:2610:1c1:1:6068::e6a:0])
 (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits))
 (Client did not present a certificate)
 by mx1.freebsd.org (Postfix) with ESMTPS id 9BBAA2598;
 Sat, 11 Jun 2016 09:25:05 +0000 (UTC)
 (envelope-from olivierd@FreeBSD.org)
Received: from repo.freebsd.org ([127.0.1.37])
 by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id u5B9P4Qa062030;
 Sat, 11 Jun 2016 09:25:04 GMT (envelope-from olivierd@FreeBSD.org)
Received: (from olivierd@localhost)
 by repo.freebsd.org (8.15.2/8.15.2/Submit) id u5B9P4t4062029;
 Sat, 11 Jun 2016 09:25:04 GMT (envelope-from olivierd@FreeBSD.org)
Message-Id: <201606110925.u5B9P4t4062029@repo.freebsd.org>
X-Authentication-Warning: repo.freebsd.org: olivierd set sender to
 olivierd@FreeBSD.org using -f
From: Olivier Duchateau <olivierd@FreeBSD.org>
Date: Sat, 11 Jun 2016 09:25:04 +0000 (UTC)
To: ports-committers@freebsd.org, svn-ports-all@freebsd.org,
 svn-ports-head@freebsd.org
Subject: svn commit: r416710 - head/biology/py-biom-format
X-SVN-Group: ports-head
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
X-BeenThere: svn-ports-all@freebsd.org
X-Mailman-Version: 2.1.22
Precedence: list
List-Id: SVN commit messages for the ports tree <svn-ports-all.freebsd.org>
List-Unsubscribe: <https://lists.freebsd.org/mailman/options/svn-ports-all>,
 <mailto:svn-ports-all-request@freebsd.org?subject=unsubscribe>
List-Archive: <http://lists.freebsd.org/pipermail/svn-ports-all/>
List-Post: <mailto:svn-ports-all@freebsd.org>
List-Help: <mailto:svn-ports-all-request@freebsd.org?subject=help>
List-Subscribe: <https://lists.freebsd.org/mailman/listinfo/svn-ports-all>,
 <mailto:svn-ports-all-request@freebsd.org?subject=subscribe>
X-List-Received-Date: Sat, 11 Jun 2016 09:25:05 -0000

Author: olivierd
Date: Sat Jun 11 09:25:04 2016
New Revision: 416710
URL: https://svnweb.freebsd.org/changeset/ports/416710

Log:
  - Fix run-time dependency issues
  - Bump PORTREVISION
  
  PR:		209767
  Submitted by:	Joseph Mingrone (maintainer)

Modified:
  head/biology/py-biom-format/Makefile

Modified: head/biology/py-biom-format/Makefile
==============================================================================
--- head/biology/py-biom-format/Makefile	Sat Jun 11 09:13:19 2016	(r416709)
+++ head/biology/py-biom-format/Makefile	Sat Jun 11 09:25:04 2016	(r416710)
@@ -3,6 +3,7 @@
 
 PORTNAME=	biom-format
 PORTVERSION=	2.1.5
+PORTREVISION=	1
 CATEGORIES=	biology python
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
@@ -12,7 +13,11 @@ COMMENT=	Biological Observation Matrix (
 LICENSE=	BSD3CLAUSE
 
 BUILD_DEPENDS=	${PYNUMPY}
-RUN_DEPENDS=	${PYNUMPY} ${PYTHON_PKGNAMEPREFIX}h5py>0:science/py-h5py
+RUN_DEPENDS=	${PYNUMPY} \
+		${PYTHON_PKGNAMEPREFIX}h5py>=2.6.0:science/py-h5py    \
+		${PYTHON_PKGNAMEPREFIX}click>=6.6:devel/py-click      \
+		${PYTHON_PKGNAMEPREFIX}future>=0.15.2:devel/py-future \
+		${PYTHON_PKGNAMEPREFIX}scipy>=0.16.1:science/py-scipy
 
 USE_GITHUB=	yes
 GH_ACCOUNT=	biocore
@@ -20,7 +25,13 @@ GH_ACCOUNT=	biocore
 USES=		python
 USE_PYTHON=	autoplist distutils
 
+.include <bsd.port.pre.mk>
+
+.if ${PYTHON_REL} < 3000
+RUN_DEPENDS+=	${PYTHON_PKGNAMEPREFIX}pyqi>=0.2.0:devel/py-pyqi
+.endif
+
 post-install:
 	${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/biom/*.so
 
-.include <bsd.port.mk>
+.include <bsd.port.post.mk>