Date: Fri, 25 Dec 2015 12:30:50 +0000 (UTC) From: Carlo Strub <cs@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r404418 - in head/science/py-DendroPy: . files Message-ID: <201512251230.tBPCUoPc077310@repo.freebsd.org>
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Author: cs Date: Fri Dec 25 12:30:50 2015 New Revision: 404418 URL: https://svnweb.freebsd.org/changeset/ports/404418 Log: Update to 4.0.3 Deleted: head/science/py-DendroPy/files/ Modified: head/science/py-DendroPy/Makefile head/science/py-DendroPy/distinfo head/science/py-DendroPy/pkg-plist Modified: head/science/py-DendroPy/Makefile ============================================================================== --- head/science/py-DendroPy/Makefile Fri Dec 25 12:16:41 2015 (r404417) +++ head/science/py-DendroPy/Makefile Fri Dec 25 12:30:50 2015 (r404418) @@ -2,8 +2,7 @@ # $FreeBSD$ PORTNAME= DendroPy -PORTVERSION= 3.12.0 -PORTREVISION= 1 +PORTVERSION= 4.0.3 CATEGORIES= science python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} Modified: head/science/py-DendroPy/distinfo ============================================================================== --- head/science/py-DendroPy/distinfo Fri Dec 25 12:16:41 2015 (r404417) +++ head/science/py-DendroPy/distinfo Fri Dec 25 12:30:50 2015 (r404418) @@ -1,2 +1,2 @@ -SHA256 (DendroPy-3.12.0.tar.gz) = 38a0f36f2f7aae43ec5599408b0d0a4c80996b749589f025940d955a70fc82d4 -SIZE (DendroPy-3.12.0.tar.gz) = 6631147 +SHA256 (DendroPy-4.0.3.tar.gz) = a2c074eb91e2866120521c076587983900c5b312879832c3559effb730bd4465 +SIZE (DendroPy-4.0.3.tar.gz) = 16330973 Modified: head/science/py-DendroPy/pkg-plist ============================================================================== --- head/science/py-DendroPy/pkg-plist Fri Dec 25 12:16:41 2015 (r404417) +++ head/science/py-DendroPy/pkg-plist Fri Dec 25 12:30:50 2015 (r404418) @@ -1,77 +1,118 @@ -bin/cattrees.py -bin/long_branch_symmdiff.py -bin/strict_consensus_merge.py -bin/sumlabels.py bin/sumtrees.py %%PYTHON_SITELIBDIR%%/dendropy/__init__.py %%PYTHON_SITELIBDIR%%/dendropy/__init__.pyc %%PYTHON_SITELIBDIR%%/dendropy/__init__.pyo -%%PYTHON_SITELIBDIR%%/dendropy/coalescent.py -%%PYTHON_SITELIBDIR%%/dendropy/coalescent.pyc -%%PYTHON_SITELIBDIR%%/dendropy/coalescent.pyo -%%PYTHON_SITELIBDIR%%/dendropy/continuous.py -%%PYTHON_SITELIBDIR%%/dendropy/continuous.pyc -%%PYTHON_SITELIBDIR%%/dendropy/continuous.pyo +%%PYTHON_SITELIBDIR%%/dendropy/__main__.py +%%PYTHON_SITELIBDIR%%/dendropy/__main__.pyc +%%PYTHON_SITELIBDIR%%/dendropy/__main__.pyo +%%PYTHON_SITELIBDIR%%/dendropy/calculate/__init__.py +%%PYTHON_SITELIBDIR%%/dendropy/calculate/__init__.pyc +%%PYTHON_SITELIBDIR%%/dendropy/calculate/__init__.pyo +%%PYTHON_SITELIBDIR%%/dendropy/calculate/mathfn.py +%%PYTHON_SITELIBDIR%%/dendropy/calculate/mathfn.pyc +%%PYTHON_SITELIBDIR%%/dendropy/calculate/mathfn.pyo +%%PYTHON_SITELIBDIR%%/dendropy/calculate/popgenstat.py +%%PYTHON_SITELIBDIR%%/dendropy/calculate/popgenstat.pyc +%%PYTHON_SITELIBDIR%%/dendropy/calculate/popgenstat.pyo +%%PYTHON_SITELIBDIR%%/dendropy/calculate/probability.py +%%PYTHON_SITELIBDIR%%/dendropy/calculate/probability.pyc +%%PYTHON_SITELIBDIR%%/dendropy/calculate/probability.pyo +%%PYTHON_SITELIBDIR%%/dendropy/calculate/statistics.py 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+%%PYTHON_SITELIBDIR%%/dendropy/datamodel/treemodel.py +%%PYTHON_SITELIBDIR%%/dendropy/datamodel/treemodel.pyc +%%PYTHON_SITELIBDIR%%/dendropy/datamodel/treemodel.pyo %%PYTHON_SITELIBDIR%%/dendropy/interop/__init__.py %%PYTHON_SITELIBDIR%%/dendropy/interop/__init__.pyc %%PYTHON_SITELIBDIR%%/dendropy/interop/__init__.pyo @@ -96,55 +137,138 @@ bin/sumtrees.py %%PYTHON_SITELIBDIR%%/dendropy/interop/muscle.py %%PYTHON_SITELIBDIR%%/dendropy/interop/muscle.pyc %%PYTHON_SITELIBDIR%%/dendropy/interop/muscle.pyo -%%PYTHON_SITELIBDIR%%/dendropy/interop/ncbi.py -%%PYTHON_SITELIBDIR%%/dendropy/interop/ncbi.pyc -%%PYTHON_SITELIBDIR%%/dendropy/interop/ncbi.pyo %%PYTHON_SITELIBDIR%%/dendropy/interop/paup.py %%PYTHON_SITELIBDIR%%/dendropy/interop/paup.pyc %%PYTHON_SITELIBDIR%%/dendropy/interop/paup.pyo %%PYTHON_SITELIBDIR%%/dendropy/interop/raxml.py %%PYTHON_SITELIBDIR%%/dendropy/interop/raxml.pyc %%PYTHON_SITELIBDIR%%/dendropy/interop/raxml.pyo +%%PYTHON_SITELIBDIR%%/dendropy/interop/rstats.py 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