Skip site navigation (1)Skip section navigation (2)
Date:      Sat, 29 Aug 2020 01:09:26 GMT
From:      pkg-fallout@FreeBSD.org
To:        yuri@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [package - 113amd64-default][math/flann] Failed for flann-1.9.1.29 in build
Message-ID:  <202008290109.07T19QCU015398@beefy9.nyi.freebsd.org>

next in thread | raw e-mail | index | archive | help
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: yuri@FreeBSD.org
Ident:          $FreeBSD: head/math/flann/Makefile 546770 2020-08-28 17:49:50Z yuri $
Log URL:        http://beefy9.nyi.freebsd.org/data/113amd64-default/546860/logs/flann-1.9.1.29.log
Build URL:      http://beefy9.nyi.freebsd.org/build.html?mastername=113amd64-default&build=546860
Log:

=>> Building math/flann
build started at Sat Aug 29 01:09:17 UTC 2020
port directory: /usr/ports/math/flann
package name: flann-1.9.1.29
building for: FreeBSD 113amd64-default-job-01 11.3-RELEASE-p12 FreeBSD 11.3-RELEASE-p12 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: head/math/flann/Makefile 546770 2020-08-28 17:49:50Z yuri $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1103000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1103000
UNAME_v=FreeBSD 11.3-RELEASE-p12
UNAME_r=11.3-RELEASE-p12
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/113amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/113amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=113amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/113amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/math/flann/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/flann/work  HOME=/wrkdirs/usr/ports/math/flann/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/flann/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/math/flann/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/flann/work  HOME=/wrkdirs/usr/ports/math/flann/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/flann/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/math/flann/work/stage PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing "  CPP="cpp" CPPFLAGS="-isystem /usr/local/include"  LDFLAGS=" -fstack-protector-strong -L/usr/local/lib " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m
  444"
--End MAKE_ENV--

--PLIST_SUB--
CMAKE_BUILD_TYPE="release" OSREL=11.3 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/flann"  EXAMPLESDIR="share/examples/flann"  DATADIR="share/flann"  WWWDIR="www/flann"  ETCDIR="etc/flann"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/flann DOCSDIR=/usr/local/share/doc/flann EXAMPLESDIR=/usr/local/share/examples/flann  WWWDIR=/usr/local/www/flann ETCDIR=/usr/local/etc/flann
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd11.3 Thread model: posix InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd11.3 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
_OBJC_CCVERSION_921dbbb2=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd11.3 Thread model: posix InstalledDir: /usr/bin
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=amd64
OPSYS=FreeBSD
_OSRELEASE=11.3-RELEASE-p12
OSREL=11.3
OSVERSION=1103000
PYTHONBASE=/usr/local
HAVE_COMPAT_IA32_KERN=YES
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   flann-1.9.1.29 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.14.7.txz
[113amd64-default-job-01] Installing pkg-1.14.7...
[113amd64-default-job-01] Extracting pkg-1.14.7: .......... done
===>   flann-1.9.1.29 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of flann-1.9.1.29
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
=> mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://codeload.github.com/mariusmuja/flann/tar.gz/1.9.1-29-g1d04523?dummy=/mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz
fetch: https://codeload.github.com/mariusmuja/flann/tar.gz/1.9.1-29-g1d04523?dummy=/mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz: size unknown
fetch: https://codeload.github.com/mariusmuja/flann/tar.gz/1.9.1-29-g1d04523?dummy=/mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz: size of remote file is not known
mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz          452 kB 4943 kBps    00s
===> Fetching all distfiles required by flann-1.9.1.29 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by flann-1.9.1.29 for building
=> SHA256 Checksum OK for mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by flann-1.9.1.29 for building
===>  Extracting for flann-1.9.1.29
=> SHA256 Checksum OK for mariusmuja-flann-1.9.1-29-g1d04523_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for flann-1.9.1.29
===>  Applying FreeBSD patches for flann-1.9.1.29 from /usr/ports/math/flann/files
===========================================================================
=======================<phase: build-depends  >============================
===>   flann-1.9.1.29 depends on file: /usr/local/bin/cmake - not found
===>   Installing existing package /packages/All/cmake-3.18.2.txz
[113amd64-default-job-01] Installing cmake-3.18.2...
[113amd64-default-job-01] `-- Installing curl-7.72.0...
[113amd64-default-job-01] |   `-- Installing ca_root_nss-3.56...
[113amd64-default-job-01] |   `-- Extracting ca_root_nss-3.56: ........ done
[113amd64-default-job-01] |   `-- Installing libnghttp2-1.41.0...
[113amd64-default-job-01] |   `-- Extracting libnghttp2-1.41.0: .......... done
[113amd64-default-job-01] `-- Extracting curl-7.72.0: .......... done
[113amd64-default-job-01] `-- Installing expat-2.2.8...
[113amd64-default-job-01] `-- Extracting expat-2.2.8: .......... done
[113amd64-default-job-01] `-- Installing jsoncpp-1.9.3...
[113amd64-default-job-01] `-- Extracting jsoncpp-1.9.3: .......... done
[113amd64-default-job-01] `-- Installing libarchive-3.4.3,1...
[113amd64-default-job-01] |   `-- Installing liblz4-1.9.2_1,1...
[113amd64-default-job-01] |   `-- Extracting liblz4-1.9.2_1,1: .......... done
[113amd64-default-job-01] |   `-- Installing lzo2-2.10_1...
[113amd64-default-job-01] |   `-- Extracting lzo2-2.10_1: .......... done
[113amd64-default-job-01] `-- Extracting libarchive-3.4.3,1: .......... done
[113amd64-default-job-01] `-- Installing libuv-1.38.1...
[113amd64-default-job-01] `-- Extracting libuv-1.38.1: .......... done
[113amd64-default-job-01] `-- Installing rhash-1.3.9...
[113amd64-default-job-01] |   `-- Installing gettext-runtime-0.21...
[113amd64-default-job-01] |   | `-- Installing indexinfo-0.3.1...
[113amd64-default-job-01] |   | `-- Extracting indexinfo-0.3.1: .... done
[113amd64-default-job-01] |   `-- Extracting gettext-runtime-0.21: .......... done
[113amd64-default-job-01] `-- Extracting rhash-1.3.9: .......... done
[113amd64-default-job-01] Extracting cmake-3.18.2: .......... done
=====
Message from ca_root_nss-3.56:

--
FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.

Assessment and verification of trust is the complete responsibility of the
system administrator.


This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.

This enables SSL Certificate Verification by client software without manual
intervention.

If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.

  * /etc/ssl/cert.pem
  * /usr/local/etc/ssl/cert.pem
  * /usr/local/openssl/cert.pem
===>   flann-1.9.1.29 depends on file: /usr/local/bin/cmake - found
===>   Returning to build of flann-1.9.1.29
===>   flann-1.9.1.29 depends on executable: ninja - not found
===>   Installing existing package /packages/All/ninja-1.10.0,2.txz
[113amd64-default-job-01] Installing ninja-1.10.0,2...
[113amd64-default-job-01] `-- Installing python37-3.7.9...
[113amd64-default-job-01] |   `-- Installing libffi-3.3_1...
[113amd64-default-job-01] |   `-- Extracting libffi-3.3_1: .......... done
[113amd64-default-job-01] |   `-- Installing readline-8.0.4...
[113amd64-default-job-01] |   `-- Extracting readline-8.0.4: .......... done
[113amd64-default-job-01] `-- Extracting python37-3.7.9: .......... done
[113amd64-default-job-01] Extracting ninja-1.10.0,2: ........ done
=====
Message from python37-3.7.9:

--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

py37-gdbm       databases/py-gdbm@py37
py37-sqlite3    databases/py-sqlite3@py37
py37-tkinter    x11-toolkits/py-tkinter@py37
===>   flann-1.9.1.29 depends on executable: ninja - found
===>   Returning to build of flann-1.9.1.29
===>   flann-1.9.1.29 depends on package: pkgconf>=1.3.0_1 - not found
===>   Installing existing package /packages/All/pkgconf-1.7.3,1.txz
[113amd64-default-job-01] Installing pkgconf-1.7.3,1...
[113amd64-default-job-01] Extracting pkgconf-1.7.3,1: .......... done
===>   flann-1.9.1.29 depends on package: pkgconf>=1.3.0_1 - found
===>   Returning to build of flann-1.9.1.29
===========================================================================
=======================<phase: lib-depends    >============================
===>   flann-1.9.1.29 depends on shared library: libhdf5.so - not found
===>   Installing existing package /packages/All/hdf5-1.10.6,1.txz
[113amd64-default-job-01] Installing hdf5-1.10.6,1...
[113amd64-default-job-01] `-- Installing hdf-szip-2.1.1...
[113amd64-default-job-01] `-- Extracting hdf-szip-2.1.1: .......... done
[113amd64-default-job-01] Extracting hdf5-1.10.6,1: .......... done
===>   flann-1.9.1.29 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so)
===>   Returning to build of flann-1.9.1.29
===>   flann-1.9.1.29 depends on shared library: liblz4.so - found (/usr/local/lib/liblz4.so)
===>   flann-1.9.1.29 depends on shared library: libsz.so - found (/usr/local/lib/libsz.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for flann-1.9.1.29
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/math/flann/work/.build
-- The C compiler identification is Clang 8.0.0
-- The CXX compiler identification is Clang 8.0.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.10.6")  
-- Found PkgConfig: pkgconf (found version "1.7.3") 
-- Checking for module 'liblz4'
--   Found liblz4, version 1.9.2
-- Install prefix: /usr/local
-- Build type: Release
-- Building C bindings: ON
-- Building examples: OFF
-- Building tests: OFF
-- Building documentation: OFF
-- Building python bindings: OFF
-- Building matlab bindings: OFF
-- Building CUDA library: OFF
-- Using OpenMP support: OFF
-- Using MPI support: OFF
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_COLOR_MAKEFILE
    CMAKE_CXX_FLAGS_DEBUG
    CMAKE_C_FLAGS_DEBUG
    CMAKE_C_FLAGS_RELEASE
    CMAKE_EXE_LINKER_FLAGS
    CMAKE_MODULE_LINKER_FLAGS
    CMAKE_VERBOSE_MAKEFILE
    THREADS_HAVE_PTHREAD_ARG


-- Build files have been written to: /wrkdirs/usr/ports/math/flann/work/.build
===========================================================================
=======================<phase: build          >============================
===>  Building for flann-1.9.1.29
[1/10] /usr/bin/c++ -DFLANN_EXPORTS -D_FLANN_VERSION=1.9.1 -I/wrkdirs/usr/ports/math/flann/work/flann-1.9.1-29-g1d04523/src/cpp -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -fPIC   -Wall -Wno-unknown-pragmas -Wno-unused-function -MD -MT src/cpp/CMakeFiles/flann_cpp.dir/flann/flann_cpp.cpp.o -MF src/cpp/CMakeFiles/flann_cpp.dir/flann/flann_cpp.cpp.o.d -o src/cpp/CMakeFiles/flann_cpp.dir/flann/flann_cpp.cpp.o -c /wrkdirs/usr/ports/math/flann/work/flann-1.9.1-29-g1d04523/src/cpp/flann/flann_cpp.cpp
[2/10] : && /usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -fstack-protector-strong -L/usr/local/lib -shared -Wl,-soname,libflann_cpp.so.1.9 -o lib/libflann_cpp.so.1.9.1 src/cpp/CMakeFiles/flann_cpp.dir/flann/flann_cpp.cpp.o  -Wl,--push-state,--no-as-needed  -llz4  -Wl,--pop-state && :
FAILED: lib/libflann_cpp.so.1.9.1 
: && /usr/bin/c++ -fPIC -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -fstack-protector-strong -L/usr/local/lib -shared -Wl,-soname,libflann_cpp.so.1.9 -o lib/libflann_cpp.so.1.9.1 src/cpp/CMakeFiles/flann_cpp.dir/flann/flann_cpp.cpp.o  -Wl,--push-state,--no-as-needed  -llz4  -Wl,--pop-state && :
/usr/bin/ld: unrecognized option '--push-state'
/usr/bin/ld: use the --help option for usage information
c++: error: linker command failed with exit code 1 (use -v to see invocation)
ninja: build stopped: subcommand failed.
*** Error code 1

Stop.
make: stopped in /usr/ports/math/flann



Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202008290109.07T19QCU015398>