From owner-freebsd-pkg@freebsd.org Fri Jan 8 11:40:00 2016 Return-Path: Delivered-To: freebsd-pkg@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id AB7D6A68FD2 for ; Fri, 8 Jan 2016 11:40:00 +0000 (UTC) (envelope-from mexas@bristol.ac.uk) Received: from mail-wm0-x232.google.com (mail-wm0-x232.google.com [IPv6:2a00:1450:400c:c09::232]) (using TLSv1.2 with cipher ECDHE-RSA-AES128-GCM-SHA256 (128/128 bits)) (Client CN "smtp.gmail.com", Issuer "Google Internet Authority G2" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 474FF14CB for ; Fri, 8 Jan 2016 11:40:00 +0000 (UTC) (envelope-from mexas@bristol.ac.uk) Received: by mail-wm0-x232.google.com with SMTP id f206so132689701wmf.0 for ; Fri, 08 Jan 2016 03:40:00 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=bris-ac-uk.20150623.gappssmtp.com; s=20150623; h=date:from:message-id:to:subject:reply-to; bh=0Uzw1yNRJoozpABphXZOA4lmrxlJ5axpl1Z444sWFsI=; b=o27Saz7cYdU9NiS+WUzjxD687pvQ55rPqE0+86JPFGL3unKecJWwcmt5Fedn74r4hX MdyWEcBC07vKrtAkcYI5jHio0giRP/w3lJXKWfp/nOEAdGYCyuXlId5UQUI3aSwxji9U hMf9hczi0VqEdPTiMg3R0anhRo4J5HO1h/PY/lNIMLCOkjO9QDZdBIgtKGkyfpyIeWSV O2N4PhjbftCfdW2Qpjs1bYk16cBd/VPeEMvNZQSwOe1m/eRr/l2RyIeu1gY9IFD5k2VS jqPJaImHBGJcbsPN4HFv9F9+vJ5iy5G+08aaQYvL7dzs6thltLgYc+ttNoMDwmihrorG uNZA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20130820; h=x-gm-message-state:date:from:message-id:to:subject:reply-to; bh=0Uzw1yNRJoozpABphXZOA4lmrxlJ5axpl1Z444sWFsI=; b=ZHrKB03p2btQfv04vwxd7HjZ9IIosfJ+A64lQdmalOIc5eF9rrc/wTSIdgKnHXJtu0 gaPAovH3W1n+I+i8eYIw9G/zZ4KwfoYFNLelFu9cDSpwO55fxSC8A++4ri4torsjx5f6 eF6iBCc0VelXmAVawl63wjvXosQTYccr8f2sa5BVtTFBcoM/z7OhQiyWUEvGd7oDB9GO S7JzSsN/T35epTHCO4E3z5RczZRJ6+1DTUyD7w9mZE3Q50uzAbZauwqov1UtF6clrxhl wr0wbdnaE1DcT3jyJCfi9JuEqW3pV3w7TxR4Bz80qONiLsfq+Pjmc+I1QYh73gTtoFy0 /UXA== X-Gm-Message-State: ALoCoQkctaMhVllIW7oe6pQvXvkxgOIEXXIr9Ueyal3h6IwwvfFsLq8eZilJuiYt0bZGvsfMrWMfeI8p6LP9ZBawb8bURmqLyg== X-Received: by 10.194.202.135 with SMTP id ki7mr99570693wjc.81.1452253197311; Fri, 08 Jan 2016 03:39:57 -0800 (PST) Received: from mech-as222.men.bris.ac.uk (mech-as222.men.bris.ac.uk. [137.222.170.4]) by smtp.gmail.com with ESMTPSA id pn6sm105569595wjb.15.2016.01.08.03.39.56 for (version=TLS1_2 cipher=ECDHE-RSA-AES128-GCM-SHA256 bits=128/128); Fri, 08 Jan 2016 03:39:56 -0800 (PST) Date: Fri, 08 Jan 2016 03:39:56 -0800 (PST) X-Google-Original-Date: Fri, 8 Jan 2016 11:39:55 GMT Received: from mech-as222.men.bris.ac.uk (localhost [127.0.0.1]) by mech-as222.men.bris.ac.uk (8.15.2/8.15.2) with ESMTP id u08BduqJ083648 for ; Fri, 8 Jan 2016 11:39:56 GMT (envelope-from mexas@mech-as222.men.bris.ac.uk) Received: (from mexas@localhost) by mech-as222.men.bris.ac.uk (8.15.2/8.15.2/Submit) id u08BdtKu083647 for freebsd-pkg@freebsd.org; Fri, 8 Jan 2016 11:39:55 GMT (envelope-from mexas) From: Anton Shterenlikht Message-Id: <201601081139.u08BdtKu083647@mech-as222.men.bris.ac.uk> To: freebsd-pkg@freebsd.org Subject: recent pkg upgrade - lots of missing libraries + crash Reply-To: mexas@bris.ac.uk X-BeenThere: freebsd-pkg@freebsd.org X-Mailman-Version: 2.1.20 Precedence: list List-Id: Binary package management and package tools discussion List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 08 Jan 2016 11:40:00 -0000 I just did a pkg upgrade on a box with about 900 packages. It went smoothly. I then did pkg check and got lots of missing libs, and a crash: # pkg check -srda Checking all packages: 100% CalculiX has require a missing libraries: libGLU.so.1 ImageMagick has require a missing libraries: libfftw3.so.3 analitza has require a missing libraries: libGLU.so.1 avogadro has require a missing libraries: libGLU.so.1 cgnslib has require a missing libraries: libGLU.so.1 fltk has require a missing libraries: libGLU.so.1 fr-aster has require a missing libraries: libmetis.so freeglut has require a missing libraries: libGLU.so.1 geomview has require a missing libraries: libGLU.so.1 ghostscript9-base has require a missing libraries: libvga.so.1 ghostscript9-base has require a missing libraries: libvgagl.so.1 gmsh has require a missing libraries: libGLU.so.1 grace has a missing dependency: pdflib grace has require a missing libraries: libpdf.so.6 grace has require a missing libraries: libt1.so.5 gtkglext has require a missing libraries: libGLU.so.1 juk has require a missing libraries: libtag.so.1 kalgebra has require a missing libraries: libGLU.so.1 kde-workspace has require a missing libraries: libGLU.so.1 kdeartwork has require a missing libraries: libGLU.so.1 kfilemetadata has require a missing libraries: libtag.so.1 ksudoku has require a missing libraries: libGLU.so.1 kubrick has require a missing libraries: libGLU.so.1 libGLU has require a missing libraries: libGL.so mesa-demos has require a missing libraries: libGLU.so.1 nepomuk-core has require a missing libraries: libtag.so.1 paraview has require a missing libraries: libGLU.so.1 py27-numpy has require a missing libraries: libopenblas.so t1lib has require a missing libraries: libXaw.so t1lib has require a missing libraries: libICE.so t1lib has require a missing libraries: libX11.so t1lib has require a missing libraries: libXt.so t1lib has require a missing libraries: libXpm.so t1lib has require a missing libraries: libSM.so t1lib has require a missing libraries: libXext.so t1lib has require a missing libraries: libXmu.so taucs has a missing dependency: metis4 taucs has require a missing libraries: libmetis.so.1 vlc-qt4 has require a missing libraries: libmpeg2.so.0 vlc-qt4 has require a missing libraries: libtag.so.1 wx28-gtk2 has require a missing libraries: libGLU.so.1 xscreensaver has require a missing libraries: libGLU.so.1 z88 has require a missing libraries: libGLU.so.1 >>> Missing package dependencies were detected. >>> Found 2 issue(s) in the package database. Assertion failed: (pattern != NULL), function pkg_jobs_maybe_match_file, file pkg_jobs.c, line 188. Child process pid=92004 terminated abnormally: Abort trap Why does pkg say it found only 2 issues? It seems there are way more issues. Can anybody reproduce this crash? Anton