Date: Fri, 13 Mar 2020 19:37:11 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r528373 - head/math/mlpack Message-ID: <202003131937.02DJbBuC023160@repo.freebsd.org>
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Author: yuri Date: Fri Mar 13 19:37:11 2020 New Revision: 528373 URL: https://svnweb.freebsd.org/changeset/ports/528373 Log: math/mlpack: Update 3.0.1 -> 3.2.2 Also update MASTER_SITES and WWW to use the https URL. PR: 242096 Approved by: robert.ayrapetyan@gmail.com (maintainer's timeout; ~85 days) Modified: head/math/mlpack/Makefile head/math/mlpack/distinfo head/math/mlpack/pkg-descr head/math/mlpack/pkg-plist Modified: head/math/mlpack/Makefile ============================================================================== --- head/math/mlpack/Makefile Fri Mar 13 18:58:18 2020 (r528372) +++ head/math/mlpack/Makefile Fri Mar 13 19:37:11 2020 (r528373) @@ -1,23 +1,27 @@ # $FreeBSD$ PORTNAME= mlpack -DISTVERSION= 3.0.1 -PORTREVISION= 10 +DISTVERSION= 3.2.2 CATEGORIES= math -MASTER_SITES= http://mlpack.org/files/ +MASTER_SITES= https://mlpack.org/files/ MAINTAINER= robert.ayrapetyan@gmail.com COMMENT= Fast, flexible machine learning library LICENSE= BSD3CLAUSE +BUILD_DEPENDS= ensmallen>0:math/ensmallen \ + ${LOCALBASE}/include/stb/stb_image.h:devel/stb LIB_DEPENDS= libboost_program_options.so:devel/boost-libs \ libboost_unit_test_framework.so:devel/boost-libs \ libboost_serialization.so:devel/boost-libs \ libarmadillo.so:math/armadillo -USES= cmake compiler:c++14-lang +USES= cmake compiler:c++14-lang pkgconfig CMAKE_ARGS+= -DBUILD_TESTS:BOOL=false -DBUILD_CLI_EXECUTABLES=false -DBUILD_PYTHON_BINDINGS=false USE_LDCONFIG= yes + +CMAKE_ARGS= -DSTB_IMAGE_INCLUDE_DIR=${LOCALBASE}/include/stb +CMAKE_OFF= BUILD_PYTHON_BINDINGS BUILD_TESTS .include <bsd.port.mk> Modified: head/math/mlpack/distinfo ============================================================================== --- head/math/mlpack/distinfo Fri Mar 13 18:58:18 2020 (r528372) +++ head/math/mlpack/distinfo Fri Mar 13 19:37:11 2020 (r528373) @@ -1,3 +1,3 @@ -TIMESTAMP = 1526504906 -SHA256 (mlpack-3.0.1.tar.gz) = 74fe128e1c12fa760885def6ce8bee58e6c4dfd1364e186a60521c543654202f -SIZE (mlpack-3.0.1.tar.gz) = 2854183 +TIMESTAMP = 1584124401 +SHA256 (mlpack-3.2.2.tar.gz) = 7aef8c27645c9358262fec9ebba380720a086789d6519d5d1034346412a52ad6 +SIZE (mlpack-3.2.2.tar.gz) = 5378165 Modified: head/math/mlpack/pkg-descr ============================================================================== --- head/math/mlpack/pkg-descr Fri Mar 13 18:58:18 2020 (r528372) +++ head/math/mlpack/pkg-descr Fri Mar 13 19:37:11 2020 (r528373) @@ -5,4 +5,4 @@ algorithms as simple command-line programs, Python bin C++ classes which can then be integrated into larger-scale machine learning solutions. -WWW: http://www.mlpack.org/ +WWW: https://www.mlpack.org/ Modified: head/math/mlpack/pkg-plist ============================================================================== --- head/math/mlpack/pkg-plist Fri Mar 13 18:58:18 2020 (r528372) +++ head/math/mlpack/pkg-plist Fri Mar 13 19:37:11 2020 (r528373) @@ -1,3 +1,49 @@ +bin/mlpack_adaboost +bin/mlpack_approx_kfn +bin/mlpack_cf +bin/mlpack_dbscan +bin/mlpack_decision_stump +bin/mlpack_decision_tree +bin/mlpack_det +bin/mlpack_emst +bin/mlpack_fastmks +bin/mlpack_gmm_generate +bin/mlpack_gmm_probability +bin/mlpack_gmm_train +bin/mlpack_hmm_generate +bin/mlpack_hmm_loglik +bin/mlpack_hmm_train +bin/mlpack_hmm_viterbi +bin/mlpack_hoeffding_tree +bin/mlpack_kde +bin/mlpack_kernel_pca +bin/mlpack_kfn +bin/mlpack_kmeans +bin/mlpack_knn +bin/mlpack_krann +bin/mlpack_lars +bin/mlpack_linear_regression +bin/mlpack_linear_svm +bin/mlpack_lmnn +bin/mlpack_local_coordinate_coding +bin/mlpack_logistic_regression +bin/mlpack_lsh +bin/mlpack_mean_shift +bin/mlpack_nbc +bin/mlpack_nca +bin/mlpack_nmf +bin/mlpack_pca +bin/mlpack_perceptron +bin/mlpack_preprocess_binarize +bin/mlpack_preprocess_describe +bin/mlpack_preprocess_imputer +bin/mlpack_preprocess_scale +bin/mlpack_preprocess_split +bin/mlpack_radical +bin/mlpack_random_forest +bin/mlpack_range_search +bin/mlpack_softmax_regression +bin/mlpack_sparse_coding include/mlpack/bindings/cli/add_to_po.hpp include/mlpack/bindings/cli/cli_option.hpp include/mlpack/bindings/cli/default_param.hpp @@ -12,6 +58,8 @@ include/mlpack/bindings/cli/get_printable_param_name.h include/mlpack/bindings/cli/get_printable_param_name_impl.hpp include/mlpack/bindings/cli/get_printable_param_value.hpp include/mlpack/bindings/cli/get_printable_param_value_impl.hpp +include/mlpack/bindings/cli/get_printable_type.hpp +include/mlpack/bindings/cli/get_printable_type_impl.hpp include/mlpack/bindings/cli/get_raw_param.hpp include/mlpack/bindings/cli/map_parameter_name.hpp include/mlpack/bindings/cli/output_param.hpp @@ -21,16 +69,38 @@ include/mlpack/bindings/cli/parse_command_line.hpp include/mlpack/bindings/cli/print_doc_functions.hpp include/mlpack/bindings/cli/print_doc_functions_impl.hpp include/mlpack/bindings/cli/print_help.hpp +include/mlpack/bindings/cli/print_type_doc.hpp +include/mlpack/bindings/cli/print_type_doc_impl.hpp include/mlpack/bindings/cli/set_param.hpp include/mlpack/bindings/cli/string_type_param.hpp include/mlpack/bindings/cli/string_type_param_impl.hpp +include/mlpack/bindings/markdown/binding_info.hpp +include/mlpack/bindings/markdown/default_param.hpp +include/mlpack/bindings/markdown/get_binding_name.hpp +include/mlpack/bindings/markdown/get_param.hpp +include/mlpack/bindings/markdown/get_printable_param.hpp +include/mlpack/bindings/markdown/get_printable_param_name.hpp +include/mlpack/bindings/markdown/get_printable_param_name_impl.hpp +include/mlpack/bindings/markdown/get_printable_param_value.hpp +include/mlpack/bindings/markdown/get_printable_param_value_impl.hpp +include/mlpack/bindings/markdown/get_printable_type.hpp +include/mlpack/bindings/markdown/is_serializable.hpp +include/mlpack/bindings/markdown/md_option.hpp +include/mlpack/bindings/markdown/print_doc_functions.hpp +include/mlpack/bindings/markdown/print_doc_functions_impl.hpp +include/mlpack/bindings/markdown/print_docs.hpp +include/mlpack/bindings/markdown/print_type_doc.hpp +include/mlpack/bindings/markdown/program_doc_wrapper.hpp +include/mlpack/bindings/python/default_param.hpp +include/mlpack/bindings/python/default_param_impl.hpp include/mlpack/bindings/python/get_arma_type.hpp include/mlpack/bindings/python/get_cython_type.hpp include/mlpack/bindings/python/get_numpy_type.hpp include/mlpack/bindings/python/get_numpy_type_char.hpp include/mlpack/bindings/python/get_param.hpp include/mlpack/bindings/python/get_printable_param.hpp -include/mlpack/bindings/python/get_python_type.hpp +include/mlpack/bindings/python/get_printable_type.hpp +include/mlpack/bindings/python/get_printable_type_impl.hpp include/mlpack/bindings/python/import_decl.hpp include/mlpack/bindings/python/mlpack/arma_util.hpp include/mlpack/bindings/python/mlpack/cli_util.hpp @@ -43,6 +113,8 @@ include/mlpack/bindings/python/print_doc_functions_imp include/mlpack/bindings/python/print_input_processing.hpp include/mlpack/bindings/python/print_output_processing.hpp include/mlpack/bindings/python/print_pyx.hpp +include/mlpack/bindings/python/print_type_doc.hpp +include/mlpack/bindings/python/print_type_doc_impl.hpp include/mlpack/bindings/python/py_option.hpp include/mlpack/bindings/python/strip_type.hpp include/mlpack/bindings/tests/clean_memory.hpp @@ -61,13 +133,6 @@ include/mlpack/core/arma_extend/Mat_extra_meat.hpp include/mlpack/core/arma_extend/SpMat_extra_bones.hpp include/mlpack/core/arma_extend/SpMat_extra_meat.hpp include/mlpack/core/arma_extend/arma_extend.hpp -include/mlpack/core/arma_extend/fn_ccov.hpp -include/mlpack/core/arma_extend/fn_inplace_reshape.hpp -include/mlpack/core/arma_extend/glue_ccov_meat.hpp -include/mlpack/core/arma_extend/glue_ccov_proto.hpp -include/mlpack/core/arma_extend/hdf5_misc.hpp -include/mlpack/core/arma_extend/op_ccov_meat.hpp -include/mlpack/core/arma_extend/op_ccov_proto.hpp include/mlpack/core/boost_backport/bernoulli.hpp include/mlpack/core/boost_backport/boost_backport_math.hpp include/mlpack/core/boost_backport/boost_backport_serialization.hpp @@ -104,11 +169,15 @@ include/mlpack/core/cv/metrics/recall_impl.hpp include/mlpack/core/cv/simple_cv.hpp include/mlpack/core/cv/simple_cv_impl.hpp include/mlpack/core/data/binarize.hpp +include/mlpack/core/data/confusion_matrix.hpp +include/mlpack/core/data/confusion_matrix_impl.hpp include/mlpack/core/data/dataset_mapper.hpp include/mlpack/core/data/dataset_mapper_impl.hpp include/mlpack/core/data/extension.hpp include/mlpack/core/data/format.hpp include/mlpack/core/data/has_serialize.hpp +include/mlpack/core/data/image_info.hpp +include/mlpack/core/data/image_info_impl.hpp include/mlpack/core/data/imputation_methods/custom_imputation.hpp include/mlpack/core/data/imputation_methods/listwise_deletion.hpp include/mlpack/core/data/imputation_methods/mean_imputation.hpp @@ -119,6 +188,7 @@ include/mlpack/core/data/load.hpp include/mlpack/core/data/load_arff.hpp include/mlpack/core/data/load_arff_impl.hpp include/mlpack/core/data/load_csv.hpp +include/mlpack/core/data/load_image_impl.hpp include/mlpack/core/data/load_impl.hpp include/mlpack/core/data/load_model_impl.hpp include/mlpack/core/data/load_vec_impl.hpp @@ -127,10 +197,19 @@ include/mlpack/core/data/map_policies/increment_policy include/mlpack/core/data/map_policies/missing_policy.hpp include/mlpack/core/data/normalize_labels.hpp include/mlpack/core/data/normalize_labels_impl.hpp +include/mlpack/core/data/one_hot_encoding.hpp +include/mlpack/core/data/one_hot_encoding_impl.hpp include/mlpack/core/data/save.hpp include/mlpack/core/data/save_impl.hpp +include/mlpack/core/data/scaler_methods/max_abs_scaler.hpp +include/mlpack/core/data/scaler_methods/mean_normalization.hpp +include/mlpack/core/data/scaler_methods/min_max_scaler.hpp +include/mlpack/core/data/scaler_methods/pca_whitening.hpp +include/mlpack/core/data/scaler_methods/standard_scaler.hpp +include/mlpack/core/data/scaler_methods/zca_whitening.hpp include/mlpack/core/data/serialization_template_version.hpp include/mlpack/core/data/split_data.hpp +include/mlpack/core/dists/diagonal_gaussian_distribution.hpp include/mlpack/core/dists/discrete_distribution.hpp include/mlpack/core/dists/gamma_distribution.hpp include/mlpack/core/dists/gaussian_distribution.hpp @@ -142,6 +221,7 @@ include/mlpack/core/hpt/deduce_hp_types.hpp include/mlpack/core/hpt/fixed.hpp include/mlpack/core/hpt/hpt.hpp include/mlpack/core/hpt/hpt_impl.hpp +include/mlpack/core/kernels/cauchy_kernel.hpp include/mlpack/core/kernels/cosine_distance.hpp include/mlpack/core/kernels/cosine_distance_impl.hpp include/mlpack/core/kernels/epanechnikov_kernel.hpp @@ -157,10 +237,14 @@ include/mlpack/core/kernels/pspectrum_string_kernel.hp include/mlpack/core/kernels/pspectrum_string_kernel_impl.hpp include/mlpack/core/kernels/spherical_kernel.hpp include/mlpack/core/kernels/triangular_kernel.hpp +include/mlpack/core/math/ccov.hpp +include/mlpack/core/math/ccov_impl.hpp include/mlpack/core/math/clamp.hpp include/mlpack/core/math/columns_to_blocks.hpp include/mlpack/core/math/lin_alg.hpp include/mlpack/core/math/lin_alg_impl.hpp +include/mlpack/core/math/log_add.hpp +include/mlpack/core/math/log_add_impl.hpp include/mlpack/core/math/make_alias.hpp include/mlpack/core/math/random.hpp include/mlpack/core/math/random_basis.hpp @@ -174,135 +258,6 @@ include/mlpack/core/metrics/lmetric.hpp include/mlpack/core/metrics/lmetric_impl.hpp include/mlpack/core/metrics/mahalanobis_distance.hpp include/mlpack/core/metrics/mahalanobis_distance_impl.hpp -include/mlpack/core/optimizers/ada_delta/ada_delta.hpp -include/mlpack/core/optimizers/ada_delta/ada_delta_update.hpp -include/mlpack/core/optimizers/ada_grad/ada_grad.hpp -include/mlpack/core/optimizers/ada_grad/ada_grad_update.hpp -include/mlpack/core/optimizers/adam/adam.hpp -include/mlpack/core/optimizers/adam/adam_impl.hpp -include/mlpack/core/optimizers/adam/adam_update.hpp -include/mlpack/core/optimizers/adam/adamax_update.hpp -include/mlpack/core/optimizers/adam/amsgrad_update.hpp -include/mlpack/core/optimizers/adam/nadam_update.hpp -include/mlpack/core/optimizers/adam/nadamax_update.hpp -include/mlpack/core/optimizers/adam/optimisticadam_update.hpp -include/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian.hpp -include/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_function.hpp -include/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_function_impl.hpp -include/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_impl.hpp -include/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_test_functions.hpp -include/mlpack/core/optimizers/bigbatch_sgd/adaptive_stepsize.hpp -include/mlpack/core/optimizers/bigbatch_sgd/backtracking_line_search.hpp -include/mlpack/core/optimizers/bigbatch_sgd/bigbatch_sgd.hpp -include/mlpack/core/optimizers/bigbatch_sgd/bigbatch_sgd_impl.hpp -include/mlpack/core/optimizers/cmaes/cmaes.hpp -include/mlpack/core/optimizers/cmaes/cmaes_impl.hpp -include/mlpack/core/optimizers/cmaes/full_selection.hpp -include/mlpack/core/optimizers/cmaes/random_selection.hpp -include/mlpack/core/optimizers/cne/cne.hpp -include/mlpack/core/optimizers/cne/cne_impl.hpp -include/mlpack/core/optimizers/function.hpp -include/mlpack/core/optimizers/function/add_decomposable_evaluate.hpp -include/mlpack/core/optimizers/function/add_decomposable_evaluate_const.hpp -include/mlpack/core/optimizers/function/add_decomposable_evaluate_with_gradient.hpp -include/mlpack/core/optimizers/function/add_decomposable_evaluate_with_gradient_const.hpp -include/mlpack/core/optimizers/function/add_decomposable_gradient.hpp -include/mlpack/core/optimizers/function/add_evaluate.hpp -include/mlpack/core/optimizers/function/add_evaluate_with_gradient.hpp -include/mlpack/core/optimizers/function/add_gradient.hpp -include/mlpack/core/optimizers/function/static_checks.hpp -include/mlpack/core/optimizers/function/traits.hpp -include/mlpack/core/optimizers/fw/atoms.hpp -include/mlpack/core/optimizers/fw/constr_lpball.hpp -include/mlpack/core/optimizers/fw/constr_structure_group.hpp -include/mlpack/core/optimizers/fw/frank_wolfe.hpp -include/mlpack/core/optimizers/fw/frank_wolfe_impl.hpp -include/mlpack/core/optimizers/fw/func_sq.hpp -include/mlpack/core/optimizers/fw/test_func_fw.hpp -include/mlpack/core/optimizers/fw/update_classic.hpp -include/mlpack/core/optimizers/fw/update_full_correction.hpp -include/mlpack/core/optimizers/fw/update_linesearch.hpp -include/mlpack/core/optimizers/fw/update_span.hpp -include/mlpack/core/optimizers/gradient_descent/gradient_descent.hpp -include/mlpack/core/optimizers/gradient_descent/gradient_descent_impl.hpp -include/mlpack/core/optimizers/gradient_descent/test_function.hpp -include/mlpack/core/optimizers/grid_search/grid_search.hpp -include/mlpack/core/optimizers/grid_search/grid_search_impl.hpp -include/mlpack/core/optimizers/iqn/iqn.hpp -include/mlpack/core/optimizers/iqn/iqn_impl.hpp -include/mlpack/core/optimizers/katyusha/katyusha.hpp -include/mlpack/core/optimizers/katyusha/katyusha_impl.hpp -include/mlpack/core/optimizers/lbfgs/lbfgs.hpp -include/mlpack/core/optimizers/lbfgs/lbfgs_impl.hpp -include/mlpack/core/optimizers/line_search/line_search.hpp -include/mlpack/core/optimizers/line_search/line_search_impl.hpp -include/mlpack/core/optimizers/parallel_sgd/decay_policies/constant_step.hpp -include/mlpack/core/optimizers/parallel_sgd/decay_policies/exponential_backoff.hpp -include/mlpack/core/optimizers/parallel_sgd/parallel_sgd.hpp -include/mlpack/core/optimizers/parallel_sgd/parallel_sgd_impl.hpp -include/mlpack/core/optimizers/parallel_sgd/sparse_test_function.hpp -include/mlpack/core/optimizers/problems/booth_function.hpp -include/mlpack/core/optimizers/problems/bukin_function.hpp -include/mlpack/core/optimizers/problems/colville_function.hpp -include/mlpack/core/optimizers/problems/drop_wave_function.hpp -include/mlpack/core/optimizers/problems/easom_function.hpp -include/mlpack/core/optimizers/problems/eggholder_function.hpp -include/mlpack/core/optimizers/problems/generalized_rosenbrock_function.hpp -include/mlpack/core/optimizers/problems/matyas_function.hpp -include/mlpack/core/optimizers/problems/mc_cormick_function.hpp -include/mlpack/core/optimizers/problems/rastrigin_function.hpp -include/mlpack/core/optimizers/problems/rosenbrock_function.hpp -include/mlpack/core/optimizers/problems/rosenbrock_wood_function.hpp -include/mlpack/core/optimizers/problems/schwefel_function.hpp -include/mlpack/core/optimizers/problems/sgd_test_function.hpp -include/mlpack/core/optimizers/problems/sphere_function.hpp -include/mlpack/core/optimizers/problems/styblinski_tang_function.hpp -include/mlpack/core/optimizers/problems/wood_function.hpp -include/mlpack/core/optimizers/proximal/proximal.hpp -include/mlpack/core/optimizers/rmsprop/rmsprop.hpp -include/mlpack/core/optimizers/rmsprop/rmsprop_update.hpp -include/mlpack/core/optimizers/sa/exponential_schedule.hpp -include/mlpack/core/optimizers/sa/sa.hpp -include/mlpack/core/optimizers/sa/sa_impl.hpp -include/mlpack/core/optimizers/sarah/sarah.hpp -include/mlpack/core/optimizers/sarah/sarah_impl.hpp -include/mlpack/core/optimizers/sarah/sarah_plus_update.hpp -include/mlpack/core/optimizers/sarah/sarah_update.hpp -include/mlpack/core/optimizers/scd/descent_policies/cyclic_descent.hpp -include/mlpack/core/optimizers/scd/descent_policies/greedy_descent.hpp -include/mlpack/core/optimizers/scd/descent_policies/random_descent.hpp -include/mlpack/core/optimizers/scd/scd.hpp -include/mlpack/core/optimizers/scd/scd_impl.hpp -include/mlpack/core/optimizers/sdp/lrsdp.hpp -include/mlpack/core/optimizers/sdp/lrsdp_function.hpp -include/mlpack/core/optimizers/sdp/lrsdp_function_impl.hpp -include/mlpack/core/optimizers/sdp/lrsdp_impl.hpp -include/mlpack/core/optimizers/sdp/primal_dual.hpp -include/mlpack/core/optimizers/sdp/primal_dual_impl.hpp -include/mlpack/core/optimizers/sdp/sdp.hpp -include/mlpack/core/optimizers/sdp/sdp_impl.hpp -include/mlpack/core/optimizers/sgd/decay_policies/no_decay.hpp -include/mlpack/core/optimizers/sgd/sgd.hpp -include/mlpack/core/optimizers/sgd/sgd_impl.hpp -include/mlpack/core/optimizers/sgd/update_policies/gradient_clipping.hpp -include/mlpack/core/optimizers/sgd/update_policies/momentum_update.hpp -include/mlpack/core/optimizers/sgd/update_policies/nesterov_momentum_update.hpp -include/mlpack/core/optimizers/sgd/update_policies/vanilla_update.hpp -include/mlpack/core/optimizers/sgdr/cyclical_decay.hpp -include/mlpack/core/optimizers/sgdr/sgdr.hpp -include/mlpack/core/optimizers/sgdr/sgdr_impl.hpp -include/mlpack/core/optimizers/sgdr/snapshot_ensembles.hpp -include/mlpack/core/optimizers/sgdr/snapshot_sgdr.hpp -include/mlpack/core/optimizers/sgdr/snapshot_sgdr_impl.hpp -include/mlpack/core/optimizers/smorms3/smorms3.hpp -include/mlpack/core/optimizers/smorms3/smorms3_update.hpp -include/mlpack/core/optimizers/spalera_sgd/spalera_sgd.hpp -include/mlpack/core/optimizers/spalera_sgd/spalera_sgd_impl.hpp -include/mlpack/core/optimizers/spalera_sgd/spalera_stepsize.hpp -include/mlpack/core/optimizers/svrg/barzilai_borwein_decay.hpp -include/mlpack/core/optimizers/svrg/svrg.hpp -include/mlpack/core/optimizers/svrg/svrg_impl.hpp -include/mlpack/core/optimizers/svrg/svrg_update.hpp include/mlpack/core/tree/address.hpp include/mlpack/core/tree/ballbound.hpp include/mlpack/core/tree/ballbound_impl.hpp @@ -468,6 +423,7 @@ include/mlpack/methods/amf/update_rules/nmf_mult_div.h include/mlpack/methods/amf/update_rules/svd_batch_learning.hpp include/mlpack/methods/amf/update_rules/svd_complete_incremental_learning.hpp include/mlpack/methods/amf/update_rules/svd_incomplete_incremental_learning.hpp +include/mlpack/methods/ann/activation_functions/hard_sigmoid_function.hpp include/mlpack/methods/ann/activation_functions/identity_function.hpp include/mlpack/methods/ann/activation_functions/logistic_function.hpp include/mlpack/methods/ann/activation_functions/rectifier_function.hpp @@ -483,12 +439,23 @@ include/mlpack/methods/ann/augmented/tasks/score.hpp include/mlpack/methods/ann/augmented/tasks/score_impl.hpp include/mlpack/methods/ann/augmented/tasks/sort.hpp include/mlpack/methods/ann/augmented/tasks/sort_impl.hpp +include/mlpack/methods/ann/brnn.hpp +include/mlpack/methods/ann/brnn_impl.hpp include/mlpack/methods/ann/convolution_rules/border_modes.hpp include/mlpack/methods/ann/convolution_rules/fft_convolution.hpp include/mlpack/methods/ann/convolution_rules/naive_convolution.hpp include/mlpack/methods/ann/convolution_rules/svd_convolution.hpp +include/mlpack/methods/ann/dists/bernoulli_distribution.hpp +include/mlpack/methods/ann/dists/bernoulli_distribution_impl.hpp include/mlpack/methods/ann/ffn.hpp include/mlpack/methods/ann/ffn_impl.hpp +include/mlpack/methods/ann/gan/gan.hpp +include/mlpack/methods/ann/gan/gan_impl.hpp +include/mlpack/methods/ann/gan/gan_policies.hpp +include/mlpack/methods/ann/gan/metrics/inception_score.hpp +include/mlpack/methods/ann/gan/metrics/inception_score_impl.hpp +include/mlpack/methods/ann/gan/wgan_impl.hpp +include/mlpack/methods/ann/gan/wgangp_impl.hpp include/mlpack/methods/ann/init_rules/const_init.hpp include/mlpack/methods/ann/init_rules/gaussian_init.hpp include/mlpack/methods/ann/init_rules/glorot_init.hpp @@ -507,15 +474,21 @@ include/mlpack/methods/ann/layer/add_merge.hpp include/mlpack/methods/ann/layer/add_merge_impl.hpp include/mlpack/methods/ann/layer/alpha_dropout.hpp include/mlpack/methods/ann/layer/alpha_dropout_impl.hpp +include/mlpack/methods/ann/layer/atrous_convolution.hpp +include/mlpack/methods/ann/layer/atrous_convolution_impl.hpp include/mlpack/methods/ann/layer/base_layer.hpp include/mlpack/methods/ann/layer/batch_norm.hpp include/mlpack/methods/ann/layer/batch_norm_impl.hpp include/mlpack/methods/ann/layer/bilinear_interpolation.hpp include/mlpack/methods/ann/layer/bilinear_interpolation_impl.hpp +include/mlpack/methods/ann/layer/c_relu.hpp +include/mlpack/methods/ann/layer/c_relu_impl.hpp include/mlpack/methods/ann/layer/concat.hpp include/mlpack/methods/ann/layer/concat_impl.hpp include/mlpack/methods/ann/layer/concat_performance.hpp include/mlpack/methods/ann/layer/concat_performance_impl.hpp +include/mlpack/methods/ann/layer/concatenate.hpp +include/mlpack/methods/ann/layer/concatenate_impl.hpp include/mlpack/methods/ann/layer/constant.hpp include/mlpack/methods/ann/layer/constant_impl.hpp include/mlpack/methods/ann/layer/convolution.hpp @@ -536,9 +509,13 @@ include/mlpack/methods/ann/layer/gru.hpp include/mlpack/methods/ann/layer/gru_impl.hpp include/mlpack/methods/ann/layer/hard_tanh.hpp include/mlpack/methods/ann/layer/hard_tanh_impl.hpp +include/mlpack/methods/ann/layer/highway.hpp +include/mlpack/methods/ann/layer/highway_impl.hpp include/mlpack/methods/ann/layer/join.hpp include/mlpack/methods/ann/layer/join_impl.hpp include/mlpack/methods/ann/layer/layer.hpp +include/mlpack/methods/ann/layer/layer_norm.hpp +include/mlpack/methods/ann/layer/layer_norm_impl.hpp include/mlpack/methods/ann/layer/layer_traits.hpp include/mlpack/methods/ann/layer/layer_types.hpp include/mlpack/methods/ann/layer/leaky_relu.hpp @@ -557,10 +534,14 @@ include/mlpack/methods/ann/layer/max_pooling.hpp include/mlpack/methods/ann/layer/max_pooling_impl.hpp include/mlpack/methods/ann/layer/mean_pooling.hpp include/mlpack/methods/ann/layer/mean_pooling_impl.hpp +include/mlpack/methods/ann/layer/minibatch_discrimination.hpp +include/mlpack/methods/ann/layer/minibatch_discrimination_impl.hpp include/mlpack/methods/ann/layer/multiply_constant.hpp include/mlpack/methods/ann/layer/multiply_constant_impl.hpp -include/mlpack/methods/ann/layer/negative_log_likelihood.hpp -include/mlpack/methods/ann/layer/negative_log_likelihood_impl.hpp +include/mlpack/methods/ann/layer/multiply_merge.hpp +include/mlpack/methods/ann/layer/multiply_merge_impl.hpp +include/mlpack/methods/ann/layer/padding.hpp +include/mlpack/methods/ann/layer/padding_impl.hpp include/mlpack/methods/ann/layer/parametric_relu.hpp include/mlpack/methods/ann/layer/parametric_relu_impl.hpp include/mlpack/methods/ann/layer/recurrent.hpp @@ -569,26 +550,56 @@ include/mlpack/methods/ann/layer/recurrent_attention_i include/mlpack/methods/ann/layer/recurrent_impl.hpp include/mlpack/methods/ann/layer/reinforce_normal.hpp include/mlpack/methods/ann/layer/reinforce_normal_impl.hpp +include/mlpack/methods/ann/layer/reparametrization.hpp +include/mlpack/methods/ann/layer/reparametrization_impl.hpp include/mlpack/methods/ann/layer/select.hpp include/mlpack/methods/ann/layer/select_impl.hpp include/mlpack/methods/ann/layer/sequential.hpp include/mlpack/methods/ann/layer/sequential_impl.hpp +include/mlpack/methods/ann/layer/subview.hpp +include/mlpack/methods/ann/layer/transposed_convolution.hpp +include/mlpack/methods/ann/layer/transposed_convolution_impl.hpp +include/mlpack/methods/ann/layer/virtual_batch_norm.hpp +include/mlpack/methods/ann/layer/virtual_batch_norm_impl.hpp include/mlpack/methods/ann/layer/vr_class_reward.hpp include/mlpack/methods/ann/layer/vr_class_reward_impl.hpp +include/mlpack/methods/ann/layer/weight_norm.hpp +include/mlpack/methods/ann/layer/weight_norm_impl.hpp +include/mlpack/methods/ann/layer_names.hpp include/mlpack/methods/ann/loss_functions/cross_entropy_error.hpp include/mlpack/methods/ann/loss_functions/cross_entropy_error_impl.hpp +include/mlpack/methods/ann/loss_functions/dice_loss.hpp +include/mlpack/methods/ann/loss_functions/dice_loss_impl.hpp +include/mlpack/methods/ann/loss_functions/earth_mover_distance.hpp +include/mlpack/methods/ann/loss_functions/earth_mover_distance_impl.hpp include/mlpack/methods/ann/loss_functions/kl_divergence.hpp include/mlpack/methods/ann/loss_functions/kl_divergence_impl.hpp include/mlpack/methods/ann/loss_functions/mean_squared_error.hpp include/mlpack/methods/ann/loss_functions/mean_squared_error_impl.hpp +include/mlpack/methods/ann/loss_functions/negative_log_likelihood.hpp +include/mlpack/methods/ann/loss_functions/negative_log_likelihood_impl.hpp +include/mlpack/methods/ann/loss_functions/reconstruction_loss.hpp +include/mlpack/methods/ann/loss_functions/reconstruction_loss_impl.hpp include/mlpack/methods/ann/loss_functions/sigmoid_cross_entropy_error.hpp include/mlpack/methods/ann/loss_functions/sigmoid_cross_entropy_error_impl.hpp +include/mlpack/methods/ann/rbm/rbm.hpp +include/mlpack/methods/ann/rbm/rbm_impl.hpp +include/mlpack/methods/ann/rbm/rbm_policies.hpp +include/mlpack/methods/ann/rbm/spike_slab_rbm_impl.hpp +include/mlpack/methods/ann/regularizer/lregularizer.hpp +include/mlpack/methods/ann/regularizer/lregularizer_impl.hpp +include/mlpack/methods/ann/regularizer/no_regularizer.hpp +include/mlpack/methods/ann/regularizer/orthogonal_regularizer.hpp +include/mlpack/methods/ann/regularizer/orthogonal_regularizer_impl.hpp +include/mlpack/methods/ann/regularizer/regularizer.hpp include/mlpack/methods/ann/rnn.hpp include/mlpack/methods/ann/rnn_impl.hpp include/mlpack/methods/ann/visitor/add_visitor.hpp include/mlpack/methods/ann/visitor/add_visitor_impl.hpp include/mlpack/methods/ann/visitor/backward_visitor.hpp include/mlpack/methods/ann/visitor/backward_visitor_impl.hpp +include/mlpack/methods/ann/visitor/bias_set_visitor.hpp +include/mlpack/methods/ann/visitor/bias_set_visitor_impl.hpp include/mlpack/methods/ann/visitor/copy_visitor.hpp include/mlpack/methods/ann/visitor/copy_visitor_impl.hpp include/mlpack/methods/ann/visitor/delete_visitor.hpp @@ -609,6 +620,8 @@ include/mlpack/methods/ann/visitor/gradient_zero_visit include/mlpack/methods/ann/visitor/gradient_zero_visitor_impl.hpp include/mlpack/methods/ann/visitor/load_output_parameter_visitor.hpp include/mlpack/methods/ann/visitor/load_output_parameter_visitor_impl.hpp +include/mlpack/methods/ann/visitor/loss_visitor.hpp +include/mlpack/methods/ann/visitor/loss_visitor_impl.hpp include/mlpack/methods/ann/visitor/output_height_visitor.hpp include/mlpack/methods/ann/visitor/output_height_visitor_impl.hpp include/mlpack/methods/ann/visitor/output_parameter_visitor.hpp @@ -625,6 +638,8 @@ include/mlpack/methods/ann/visitor/reset_visitor.hpp include/mlpack/methods/ann/visitor/reset_visitor_impl.hpp include/mlpack/methods/ann/visitor/reward_set_visitor.hpp include/mlpack/methods/ann/visitor/reward_set_visitor_impl.hpp +include/mlpack/methods/ann/visitor/run_set_visitor.hpp +include/mlpack/methods/ann/visitor/run_set_visitor_impl.hpp include/mlpack/methods/ann/visitor/save_output_parameter_visitor.hpp include/mlpack/methods/ann/visitor/save_output_parameter_visitor_impl.hpp include/mlpack/methods/ann/visitor/set_input_height_visitor.hpp @@ -639,13 +654,40 @@ include/mlpack/methods/approx_kfn/drusilla_select.hpp include/mlpack/methods/approx_kfn/drusilla_select_impl.hpp include/mlpack/methods/approx_kfn/qdafn.hpp include/mlpack/methods/approx_kfn/qdafn_impl.hpp +include/mlpack/methods/bias_svd/bias_svd.hpp +include/mlpack/methods/bias_svd/bias_svd_function.hpp +include/mlpack/methods/bias_svd/bias_svd_function_impl.hpp +include/mlpack/methods/bias_svd/bias_svd_impl.hpp include/mlpack/methods/block_krylov_svd/randomized_block_krylov_svd.hpp include/mlpack/methods/cf/cf.hpp include/mlpack/methods/cf/cf_impl.hpp +include/mlpack/methods/cf/cf_model.hpp +include/mlpack/methods/cf/cf_model_impl.hpp +include/mlpack/methods/cf/decomposition_policies/batch_svd_method.hpp +include/mlpack/methods/cf/decomposition_policies/bias_svd_method.hpp +include/mlpack/methods/cf/decomposition_policies/nmf_method.hpp +include/mlpack/methods/cf/decomposition_policies/randomized_svd_method.hpp +include/mlpack/methods/cf/decomposition_policies/regularized_svd_method.hpp +include/mlpack/methods/cf/decomposition_policies/svd_complete_method.hpp +include/mlpack/methods/cf/decomposition_policies/svd_incomplete_method.hpp +include/mlpack/methods/cf/decomposition_policies/svdplusplus_method.hpp +include/mlpack/methods/cf/interpolation_policies/average_interpolation.hpp +include/mlpack/methods/cf/interpolation_policies/regression_interpolation.hpp +include/mlpack/methods/cf/interpolation_policies/similarity_interpolation.hpp +include/mlpack/methods/cf/neighbor_search_policies/cosine_search.hpp +include/mlpack/methods/cf/neighbor_search_policies/lmetric_search.hpp +include/mlpack/methods/cf/neighbor_search_policies/pearson_search.hpp +include/mlpack/methods/cf/normalization/combined_normalization.hpp +include/mlpack/methods/cf/normalization/item_mean_normalization.hpp +include/mlpack/methods/cf/normalization/no_normalization.hpp +include/mlpack/methods/cf/normalization/overall_mean_normalization.hpp +include/mlpack/methods/cf/normalization/user_mean_normalization.hpp +include/mlpack/methods/cf/normalization/z_score_normalization.hpp include/mlpack/methods/cf/svd_wrapper.hpp include/mlpack/methods/cf/svd_wrapper_impl.hpp include/mlpack/methods/dbscan/dbscan.hpp include/mlpack/methods/dbscan/dbscan_impl.hpp +include/mlpack/methods/dbscan/ordered_point_selection.hpp include/mlpack/methods/dbscan/random_point_selection.hpp include/mlpack/methods/decision_stump/decision_stump.hpp include/mlpack/methods/decision_stump/decision_stump_impl.hpp @@ -679,6 +721,8 @@ include/mlpack/methods/fastmks/fastmks_rules.hpp include/mlpack/methods/fastmks/fastmks_rules_impl.hpp include/mlpack/methods/fastmks/fastmks_stat.hpp include/mlpack/methods/gmm/diagonal_constraint.hpp +include/mlpack/methods/gmm/diagonal_gmm.hpp +include/mlpack/methods/gmm/diagonal_gmm_impl.hpp include/mlpack/methods/gmm/eigenvalue_ratio_constraint.hpp include/mlpack/methods/gmm/em_fit.hpp include/mlpack/methods/gmm/em_fit_impl.hpp @@ -708,6 +752,13 @@ include/mlpack/methods/hoeffding_trees/hoeffding_tree_ include/mlpack/methods/hoeffding_trees/information_gain.hpp include/mlpack/methods/hoeffding_trees/numeric_split_info.hpp include/mlpack/methods/hoeffding_trees/typedef.hpp +include/mlpack/methods/kde/kde.hpp +include/mlpack/methods/kde/kde_impl.hpp +include/mlpack/methods/kde/kde_model.hpp +include/mlpack/methods/kde/kde_model_impl.hpp +include/mlpack/methods/kde/kde_rules.hpp +include/mlpack/methods/kde/kde_rules_impl.hpp +include/mlpack/methods/kde/kde_stat.hpp include/mlpack/methods/kernel_pca/kernel_pca.hpp include/mlpack/methods/kernel_pca/kernel_pca_impl.hpp include/mlpack/methods/kernel_pca/kernel_rules/naive_method.hpp @@ -741,6 +792,16 @@ include/mlpack/methods/kmeans/sample_initialization.hp include/mlpack/methods/lars/lars.hpp include/mlpack/methods/lars/lars_impl.hpp include/mlpack/methods/linear_regression/linear_regression.hpp +include/mlpack/methods/linear_svm/linear_svm.hpp +include/mlpack/methods/linear_svm/linear_svm_function.hpp +include/mlpack/methods/linear_svm/linear_svm_function_impl.hpp +include/mlpack/methods/linear_svm/linear_svm_impl.hpp +include/mlpack/methods/lmnn/constraints.hpp +include/mlpack/methods/lmnn/constraints_impl.hpp +include/mlpack/methods/lmnn/lmnn.hpp +include/mlpack/methods/lmnn/lmnn_function.hpp +include/mlpack/methods/lmnn/lmnn_function_impl.hpp +include/mlpack/methods/lmnn/lmnn_impl.hpp include/mlpack/methods/local_coordinate_coding/lcc.hpp include/mlpack/methods/local_coordinate_coding/lcc_impl.hpp include/mlpack/methods/logistic_regression/logistic_regression.hpp @@ -788,6 +849,8 @@ include/mlpack/methods/perceptron/initialization_metho include/mlpack/methods/perceptron/learning_policies/simple_weight_update.hpp include/mlpack/methods/perceptron/perceptron.hpp include/mlpack/methods/perceptron/perceptron_impl.hpp +include/mlpack/methods/preprocess/scaling_model.hpp +include/mlpack/methods/preprocess/scaling_model_impl.hpp include/mlpack/methods/quic_svd/quic_svd.hpp include/mlpack/methods/radical/radical.hpp include/mlpack/methods/random_forest/bootstrap.hpp @@ -816,15 +879,21 @@ include/mlpack/methods/regularized_svd/regularized_svd include/mlpack/methods/regularized_svd/regularized_svd_impl.hpp include/mlpack/methods/reinforcement_learning/async_learning.hpp include/mlpack/methods/reinforcement_learning/async_learning_impl.hpp -include/mlpack/methods/reinforcement_learning/environment/acrobat.hpp +include/mlpack/methods/reinforcement_learning/environment/acrobot.hpp include/mlpack/methods/reinforcement_learning/environment/cart_pole.hpp +include/mlpack/methods/reinforcement_learning/environment/continuous_double_pole_cart.hpp include/mlpack/methods/reinforcement_learning/environment/continuous_mountain_car.hpp +include/mlpack/methods/reinforcement_learning/environment/double_pole_cart.hpp include/mlpack/methods/reinforcement_learning/environment/mountain_car.hpp +include/mlpack/methods/reinforcement_learning/environment/pendulum.hpp +include/mlpack/methods/reinforcement_learning/environment/reward_clipping.hpp include/mlpack/methods/reinforcement_learning/policy/aggregated_policy.hpp include/mlpack/methods/reinforcement_learning/policy/greedy_policy.hpp include/mlpack/methods/reinforcement_learning/q_learning.hpp include/mlpack/methods/reinforcement_learning/q_learning_impl.hpp +include/mlpack/methods/reinforcement_learning/replay/prioritized_replay.hpp include/mlpack/methods/reinforcement_learning/replay/random_replay.hpp +include/mlpack/methods/reinforcement_learning/replay/sumtree.hpp include/mlpack/methods/reinforcement_learning/training_config.hpp include/mlpack/methods/reinforcement_learning/worker/n_step_q_learning_worker.hpp include/mlpack/methods/reinforcement_learning/worker/one_step_q_learning_worker.hpp @@ -841,12 +910,16 @@ include/mlpack/methods/sparse_coding/nothing_initializ include/mlpack/methods/sparse_coding/random_initializer.hpp include/mlpack/methods/sparse_coding/sparse_coding.hpp include/mlpack/methods/sparse_coding/sparse_coding_impl.hpp -include/mlpack/methods/sparse_svm/sparse_svm_function.hpp -include/mlpack/methods/sparse_svm/sparse_svm_function_impl.hpp +include/mlpack/methods/svdplusplus/svdplusplus.hpp +include/mlpack/methods/svdplusplus/svdplusplus_function.hpp +include/mlpack/methods/svdplusplus/svdplusplus_function_impl.hpp +include/mlpack/methods/svdplusplus/svdplusplus_impl.hpp include/mlpack/mlpack_export.hpp include/mlpack/prereqs.hpp +include/mlpack/tests/ann_test_tools.hpp include/mlpack/tests/custom_layer.hpp include/mlpack/tests/main_tests/hmm_test_utils.hpp +include/mlpack/tests/main_tests/range_search_utils.hpp include/mlpack/tests/main_tests/test_helper.hpp include/mlpack/tests/mock_categorical_data.hpp include/mlpack/tests/serialization.hpp @@ -854,4 +927,5 @@ include/mlpack/tests/test_function_tools.hpp include/mlpack/tests/test_tools.hpp lib/libmlpack.so lib/libmlpack.so.3 -lib/libmlpack.so.3.0 +lib/libmlpack.so.3.2 +libdata/pkgconfig/mlpack.pc
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