From owner-svn-ports-all@freebsd.org Fri Feb 22 19:54:14 2019 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id EBD1114F8BA7; Fri, 22 Feb 2019 19:54:13 +0000 (UTC) (envelope-from sunpoet@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 8D82884848; Fri, 22 Feb 2019 19:54:13 +0000 (UTC) (envelope-from sunpoet@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 1DCC4A11E; Fri, 22 Feb 2019 19:54:13 +0000 (UTC) (envelope-from sunpoet@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id x1MJsCDT082940; Fri, 22 Feb 2019 19:54:12 GMT (envelope-from sunpoet@FreeBSD.org) Received: (from sunpoet@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id x1MJsCuq082938; Fri, 22 Feb 2019 19:54:12 GMT (envelope-from sunpoet@FreeBSD.org) Message-Id: <201902221954.x1MJsCuq082938@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: sunpoet set sender to sunpoet@FreeBSD.org using -f From: Sunpoet Po-Chuan Hsieh Date: Fri, 22 Feb 2019 19:54:12 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r493589 - head/biology/p5-BioPerl X-SVN-Group: ports-head X-SVN-Commit-Author: sunpoet X-SVN-Commit-Paths: head/biology/p5-BioPerl X-SVN-Commit-Revision: 493589 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 8D82884848 X-Spamd-Bar: -- Authentication-Results: mx1.freebsd.org X-Spamd-Result: default: False [-2.97 / 15.00]; local_wl_from(0.00)[FreeBSD.org]; NEURAL_HAM_MEDIUM(-1.00)[-0.999,0]; NEURAL_HAM_SHORT(-0.97)[-0.972,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US]; NEURAL_HAM_LONG(-1.00)[-1.000,0] X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 22 Feb 2019 19:54:14 -0000 Author: sunpoet Date: Fri Feb 22 19:54:12 2019 New Revision: 493589 URL: https://svnweb.freebsd.org/changeset/ports/493589 Log: Update to 1.007005 (1.7.5) Changes: https://metacpan.org/changes/distribution/BioPerl Modified: head/biology/p5-BioPerl/Makefile head/biology/p5-BioPerl/distinfo head/biology/p5-BioPerl/pkg-plist Modified: head/biology/p5-BioPerl/Makefile ============================================================================== --- head/biology/p5-BioPerl/Makefile Fri Feb 22 19:54:07 2019 (r493588) +++ head/biology/p5-BioPerl/Makefile Fri Feb 22 19:54:12 2019 (r493589) @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= BioPerl -PORTVERSION= 1.007004 +PORTVERSION= 1.007005 CATEGORIES= biology perl5 MASTER_SITES= CPAN MASTER_SITE_SUBDIR= CPAN:CDRAUG @@ -61,10 +61,6 @@ SQLITETEST_RUN_DEPENDS= p5-DBD-SQLite>=1:databases/p5- SQLITETEST_BUILD_DEPENDS= p5-DBD-SQLite>=1:databases/p5-DBD-SQLite SHEBANG_FILES= examples/*.pl examples/*/*.pl - -post-install: - @${MKDIR} ${STAGEDIR}${DATADIR} - cd ${WRKSRC}/models && ${COPYTREE_SHARE} . ${STAGEDIR}${DATADIR} post-install-DOCS-on: @${MKDIR} ${STAGEDIR}${DOCSDIR} Modified: head/biology/p5-BioPerl/distinfo ============================================================================== --- head/biology/p5-BioPerl/distinfo Fri Feb 22 19:54:07 2019 (r493588) +++ head/biology/p5-BioPerl/distinfo Fri Feb 22 19:54:12 2019 (r493589) @@ -1,3 +1,3 @@ -TIMESTAMP = 1549651825 +TIMESTAMP = 1550843244 SHA256 (BioPerl-1.7.4.tar.gz) = 5a074947bba299cdb47cbf1c66689502db02c022fc138459e3393da45d7c707b SIZE (BioPerl-1.7.4.tar.gz) = 7642013 Modified: head/biology/p5-BioPerl/pkg-plist ============================================================================== --- head/biology/p5-BioPerl/pkg-plist Fri Feb 22 19:54:07 2019 (r493588) +++ head/biology/p5-BioPerl/pkg-plist Fri Feb 22 19:54:12 2019 (r493589) @@ -1042,17 +1042,6 @@ bin/bp_unflatten_seq %%PERL5_MAN3%%/Bio::UpdateableSeqI.3.gz %%PERL5_MAN3%%/Bio::WebAgent.3.gz %%PERL5_MAN3%%/BioPerl.3.gz -%%DATADIR%%/README -%%DATADIR%%/biblio.dia -%%DATADIR%%/bio_liveseq_variation.dia -%%DATADIR%%/bio_map.dia -%%DATADIR%%/bio_restriction.dia -%%DATADIR%%/bioperl.dia -%%DATADIR%%/coordinatemapper.dia -%%DATADIR%%/map_proposal.txt -%%DATADIR%%/maps_and_markers.dia -%%DATADIR%%/popgen.dia -%%DATADIR%%/population_proposal.txt %%PORTDOCS%%%%DOCSDIR%%/AUTHORS %%PORTDOCS%%%%DOCSDIR%%/Changes %%PORTDOCS%%%%DOCSDIR%%/MANIFEST