From owner-svn-ports-all@freebsd.org Thu Dec 27 18:34:45 2018 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 42C8F141F2DD; Thu, 27 Dec 2018 18:34:45 +0000 (UTC) (envelope-from jrm@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id DBAA3868E9; Thu, 27 Dec 2018 18:34:44 +0000 (UTC) (envelope-from jrm@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 94B1FF897; Thu, 27 Dec 2018 18:34:44 +0000 (UTC) (envelope-from jrm@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id wBRIYiHl059307; Thu, 27 Dec 2018 18:34:44 GMT (envelope-from jrm@FreeBSD.org) Received: (from jrm@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id wBRIYifW059306; Thu, 27 Dec 2018 18:34:44 GMT (envelope-from jrm@FreeBSD.org) Message-Id: <201812271834.wBRIYifW059306@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: jrm set sender to jrm@FreeBSD.org using -f From: Joseph Mingrone Date: Thu, 27 Dec 2018 18:34:44 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r488558 - head/biology/iqtree X-SVN-Group: ports-head X-SVN-Commit-Author: jrm X-SVN-Commit-Paths: head/biology/iqtree X-SVN-Commit-Revision: 488558 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: DBAA3868E9 X-Spamd-Bar: -- Authentication-Results: mx1.freebsd.org X-Spamd-Result: default: False [-2.96 / 15.00]; local_wl_from(0.00)[FreeBSD.org]; NEURAL_HAM_MEDIUM(-1.00)[-0.999,0]; NEURAL_HAM_LONG(-1.00)[-0.999,0]; NEURAL_HAM_SHORT(-0.97)[-0.966,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US] X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 27 Dec 2018 18:34:45 -0000 Author: jrm Date: Thu Dec 27 18:34:44 2018 New Revision: 488558 URL: https://svnweb.freebsd.org/changeset/ports/488558 Log: biology/iqtree: switch to outsource cmake build Modified: head/biology/iqtree/Makefile (contents, props changed) Modified: head/biology/iqtree/Makefile ============================================================================== --- head/biology/iqtree/Makefile Thu Dec 27 17:22:19 2018 (r488557) +++ head/biology/iqtree/Makefile Thu Dec 27 18:34:44 2018 (r488558) @@ -17,7 +17,7 @@ BROKEN_armv6= fails to compile: unrecognized command BROKEN_armv7= fails to compile: unrecognized command line options '-m32' and '-msse3' BROKEN_powerpc64= fails to build: GCC version must be at least 4.8! -USES= cmake:insource compiler:openmp eigen:3 +USES= cmake compiler:openmp eigen:3 USE_GITHUB= yes GH_ACCOUNT= Cibiv GH_PROJECT= IQ-TREE @@ -28,7 +28,7 @@ PORTEXAMPLES= example.cf example.nex example.phy model OPTIONS_DEFINE= EXAMPLES do-install: - ${INSTALL_PROGRAM} ${WRKSRC}/iqtree ${STAGEDIR}${PREFIX}/bin + ${INSTALL_PROGRAM} ${BUILD_WRKSRC}/iqtree ${STAGEDIR}${PREFIX}/bin do-install-EXAMPLES-on: @${MKDIR} ${STAGEDIR}${EXAMPLESDIR}