Date: Tue, 28 May 2024 21:26:07 GMT From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org Subject: git: 3bf602d2a7d0 - main - biology/gcta: Unbreak build on 14.x aarch64 Message-ID: <202405282126.44SLQ7sl056677@gitrepo.freebsd.org>
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The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=3bf602d2a7d0bc83686fe197fa71ae7d089b63d0 commit 3bf602d2a7d0bc83686fe197fa71ae7d089b63d0 Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2024-05-28 21:25:08 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2024-05-28 21:26:06 +0000 biology/gcta: Unbreak build on 14.x aarch64 Missing #include <cstdint> in a few files Reported by: pkg-fallout --- biology/gcta/distinfo | 6 +++--- biology/gcta/files/patch-include_Covar.h | 10 ++++++++++ biology/gcta/files/patch-include_Marker.h | 10 ++++++++++ biology/gcta/files/patch-include_Pheno.h | 10 ++++++++++ 4 files changed, 33 insertions(+), 3 deletions(-) diff --git a/biology/gcta/distinfo b/biology/gcta/distinfo index 9bda3ffe28e6..6c40e3717a8f 100644 --- a/biology/gcta/distinfo +++ b/biology/gcta/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1697202096 -SHA256 (jianyangqt-gcta-v1.94.1_GH0.tar.gz) = d38841587bef016d7885cc1b3287d7ed0373bd370674130e814e2c5e6a90bfbf -SIZE (jianyangqt-gcta-v1.94.1_GH0.tar.gz) = 1101577 +TIMESTAMP = 1716931486 +SHA256 (jianyangqt-gcta-v1.94.1_GH0.tar.gz) = 88400bf4ead6598587dfc7b99159cf008e616c7433512adbc8a0fdeab1f747ce +SIZE (jianyangqt-gcta-v1.94.1_GH0.tar.gz) = 49152 SHA256 (zhilizheng-plink-ng-3744540_GH0.tar.gz) = dfa4879bc6bcbe24411451748c7c5dc803e42cafa55b008134f0d123cd933222 SIZE (zhilizheng-plink-ng-3744540_GH0.tar.gz) = 3222588 diff --git a/biology/gcta/files/patch-include_Covar.h b/biology/gcta/files/patch-include_Covar.h new file mode 100644 index 000000000000..e68900ecefd9 --- /dev/null +++ b/biology/gcta/files/patch-include_Covar.h @@ -0,0 +1,10 @@ +--- include/Covar.h.orig 2024-05-27 23:23:59 UTC ++++ include/Covar.h +@@ -19,6 +19,7 @@ + #define gcta2_covar_h + #include <vector> + #include <string> ++#include <cstdint> + #include <map> + #include "Pheno.h" + diff --git a/biology/gcta/files/patch-include_Marker.h b/biology/gcta/files/patch-include_Marker.h new file mode 100644 index 000000000000..21f74d3e34c1 --- /dev/null +++ b/biology/gcta/files/patch-include_Marker.h @@ -0,0 +1,10 @@ +--- include/Marker.h.orig 2024-05-28 12:14:10 UTC ++++ include/Marker.h +@@ -20,6 +20,7 @@ + #include <vector> + #include <map> + #include <utility> ++#include <cstdint> + using std::vector; + using std::string; + using std::to_string; diff --git a/biology/gcta/files/patch-include_Pheno.h b/biology/gcta/files/patch-include_Pheno.h new file mode 100644 index 000000000000..369993603d7b --- /dev/null +++ b/biology/gcta/files/patch-include_Pheno.h @@ -0,0 +1,10 @@ +--- include/Pheno.h.orig 2024-05-28 12:15:54 UTC ++++ include/Pheno.h +@@ -19,6 +19,7 @@ + #include <vector> + #include <string> + #include <map> ++#include <cstdint> + using std::map; + using std::vector; + using std::string;
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