From owner-freebsd-python@FreeBSD.ORG Tue Aug 28 06:00:16 2012 Return-Path: Delivered-To: freebsd-python@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 27D0B1065673 for ; Tue, 28 Aug 2012 06:00:16 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id ECDEB8FC0C for ; Tue, 28 Aug 2012 06:00:15 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.5/8.14.5) with ESMTP id q7S60F92088115 for ; Tue, 28 Aug 2012 06:00:15 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.5/8.14.5/Submit) id q7S60Ff7088114; Tue, 28 Aug 2012 06:00:15 GMT (envelope-from gnats) Date: Tue, 28 Aug 2012 06:00:15 GMT Message-Id: <201208280600.q7S60Ff7088114@freefall.freebsd.org> To: freebsd-python@FreeBSD.org From: Mauricio Herrera Cuadra Cc: Subject: Re: ports/171115: [Update]biology/py-biopython:update to 1.60 X-BeenThere: freebsd-python@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list Reply-To: Mauricio Herrera Cuadra List-Id: FreeBSD-specific Python issues List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 28 Aug 2012 06:00:16 -0000 The following reply was made to PR ports/171115; it has been noted by GNATS. From: Mauricio Herrera Cuadra To: "bug-followup@FreeBSD.org" , Wen Heping Cc: Edwin Groothuis Subject: Re: ports/171115: [Update]biology/py-biopython:update to 1.60 Date: Mon, 27 Aug 2012 22:55:12 -0700 (PDT) --258328648-757781644-1346133312=:36231 Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: quoted-printable The patch for the Makefile doesn't work right:=0A=0A[root@freebsd9-vm] /usr= /ports/biology/py-biopython # patch < Makefile.diff =0AHmm...=A0 Looks like= a unified diff to me...=0AThe text leading up to this was:=0A-------------= -------------=0A|--- Makefile.orig=A0=A0=A0=A0=A0=A0 2012-08-27 15:39:19.00= 0000000 +0800=0A|+++ Makefile=A0=A0=A0 2012-08-27 11:29:53.000000000 +0800= =0A--------------------------=0APatching file Makefile using Plan A...=0Apa= tch: **** unexpected end of file in patch=0A=0A=0APlease put the diff for a= ll the port in a single file and submit again. Thanks.=0AMauricio=0A=0A=0A= =0A________________________________=0A From: Edwin Groothuis =0ATo: mauricio@arareko.net =0ACc: bug-followup@FreeBSD.org =0ASent: M= onday, August 27, 2012 7:10 AM=0ASubject: Re: ports/171115: [Update]biology= /py-biopython:update to 1.60=0A =0AMaintainer of biology/py-biopython,=0A= =0APlease note that PR ports/171115 has just been submitted.=0A=0AIf it con= tains a patch for an upgrade, an enhancement or a bug fix=0Ayou agree on, r= eply to this email stating that you approve the patch=0Aand a committer wil= l take care of it.=0A=0AThe full text of the PR can be found at:=0A=A0 =A0 = http://www.freebsd.org/cgi/query-pr.cgi?pr=3Dports/171115=0A=0A-- =0AEdwin = Groothuis via the GNATS Auto Assign Tool=0Aedwin@FreeBSD.org --258328648-757781644-1346133312=:36231 Content-Type: text/html; charset=iso-8859-1 Content-Transfer-Encoding: quoted-printable
The patch = for the Makefile doesn't work right:

[root@freebsd9-vm] /usr/ports/biology/py-biopython # patch <= ; Makefile.diff
Hmm...  Looks like a unified diff to me...
The = text leading up to this was:
--------------------------
|--- Makefile= .orig       2012-08-27 15:39:19.000000000 +08= 00
|+++ Makefile    2012-08-27 11:29:53.000000000 +0800--------------------------
Patching file Makefile using Plan A...
patch: **** unexpected end of file in patch
<= br>
Please put the diff for all the port in a single file and sub= mit again. Thanks.
Mauricio

From: Edwin Grooth= uis <edwin@FreeBSD.org>
To:= mauricio@arareko.net
= Cc: bug-followup@FreeBSD.org
Sent: Monday, August 27, 2012 7:10 AM
Subject: Re: ports/171115: [Update]biology/py-biopython:= update to 1.60

Maintainer of biology/py-biopython,
Please note that PR ports/171115 has just been submitted.

If i= t contains a patch for an upgrade, an enhancement or a bug fix
you agree= on, reply to this email stating that you approve the patch
and a commit= ter will take care of it.

The full text of the PR can be found at:    http://www.freebsd.org/cgi/query-pr.cgi?pr=3Dp= orts/171115

--
Edwin Groothuis via the GNATS Auto Assign Too= l
edwin@FreeBSD.org


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