From owner-freebsd-ports-bugs@FreeBSD.ORG Mon Oct 13 08:00:13 2008 Return-Path: Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 4A6E61065698 for ; Mon, 13 Oct 2008 08:00:13 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id 270F58FC1B for ; Mon, 13 Oct 2008 08:00:13 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (gnats@localhost [127.0.0.1]) by freefall.freebsd.org (8.14.3/8.14.3) with ESMTP id m9D80Dvt009314 for ; Mon, 13 Oct 2008 08:00:13 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.3/8.14.3/Submit) id m9D80DGF009313; Mon, 13 Oct 2008 08:00:13 GMT (envelope-from gnats) Resent-Date: Mon, 13 Oct 2008 08:00:13 GMT Resent-Message-Id: <200810130800.m9D80DGF009313@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Wen Heping Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id B121F106569B for ; Mon, 13 Oct 2008 07:58:52 +0000 (UTC) (envelope-from nobody@FreeBSD.org) Received: from www.freebsd.org (www.freebsd.org [IPv6:2001:4f8:fff6::21]) by mx1.freebsd.org (Postfix) with ESMTP id 9F9068FC1A for ; Mon, 13 Oct 2008 07:58:52 +0000 (UTC) (envelope-from nobody@FreeBSD.org) Received: from www.freebsd.org (localhost [127.0.0.1]) by www.freebsd.org (8.14.3/8.14.3) with ESMTP id m9D7wqsV096413 for ; Mon, 13 Oct 2008 07:58:52 GMT (envelope-from nobody@www.freebsd.org) Received: (from nobody@localhost) by www.freebsd.org (8.14.3/8.14.3/Submit) id m9D7wqLk096412; Mon, 13 Oct 2008 07:58:52 GMT (envelope-from nobody) Message-Id: <200810130758.m9D7wqLk096412@www.freebsd.org> Date: Mon, 13 Oct 2008 07:58:52 GMT From: Wen Heping To: freebsd-gnats-submit@FreeBSD.org X-Send-Pr-Version: www-3.1 Cc: Subject: ports/128047: [Maintainer Update]science/jmol:update to 11.6 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 13 Oct 2008 08:00:13 -0000 >Number: 128047 >Category: ports >Synopsis: [Maintainer Update]science/jmol:update to 11.6 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Mon Oct 13 08:00:12 UTC 2008 >Closed-Date: >Last-Modified: >Originator: Wen Heping >Release: FreeBSD-8.0 Current >Organization: ChangAn Middle School >Environment: FreeBSD fb8.wenjing.com 8.0-CURRENT FreeBSD 8.0-CURRENT #0: Sun Sep 21 18:56:51 HKT 2008 root@fb8.wenjing.com:/usr/obj/usr/src/sys/GENERIC i386 >Description: update to 11.6 from 11.4.6 >How-To-Repeat: >Fix: Patch attached with submission follows: --- Makefile.orig 2008-10-13 21:04:13.000000000 +0800 +++ Makefile 2008-10-13 21:31:18.000000000 +0800 @@ -6,7 +6,7 @@ # PORTNAME= jmol -PORTVERSION= 11.4.6 +PORTVERSION= 11.6 CATEGORIES= science java MASTER_SITES= SF:source1 \ http://jmol.svn.sourceforge.net/viewvc/*checkout*/jmol/trunk/Jmol/selfSignedCertificate/:source2 @@ -19,16 +19,16 @@ COMMENT= An Open-Source Java Viewer for Chemical Structures in 3D USE_JAVA= yes -JAVA_VERSION= 1.4+ +JAVA_VERSION= 1.5+ WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} JMOL_FILES= Jmol.jar JmolApplet.jar JmolApplet0.jar \ - JmolApplet0_Core.jar JmolApplet0_Jars.jar \ - JmolApplet0_Jvxl.jar JmolApplet0_Main.jar \ + JmolApplet0_Minimize.jar \ JmolApplet0_Popup.jar JmolApplet0_Quantum.jar \ JmolApplet0_ReadersCifPdb.jar JmolApplet0_ReadersMolXyz.jar \ JmolApplet0_ReadersMore.jar JmolApplet0_ReadersXml.jar \ JmolApplet0_ShapeBio.jar JmolApplet0_ShapeSpecial.jar \ - JmolApplet0_Smiles.jar JmolApplet0_Viewer.jar \ + JmolApplet0_ShapeSurface.jar \ + JmolApplet0_Smiles.jar JmolApplet0_Symmetry.jar \ JmolApplet0_i18n.jar JMOL_FILES_EXT= Jmol.js SIGN_DIR= ${WRKSRC}/selfSignedCertificate --- distinfo.orig 2008-10-13 21:04:13.000000000 +0800 +++ distinfo 2008-10-13 21:04:13.000000000 +0800 @@ -1,6 +1,6 @@ -MD5 (jmol-11.4.6-full.tar.gz) = 7c3f82363449bedcddc06de5e80da9f2 -SHA256 (jmol-11.4.6-full.tar.gz) = c5c4dd6d28adf15c25f4a5f795578d3f25f245b40b3a2bb5dc09b3e2f30b048b -SIZE (jmol-11.4.6-full.tar.gz) = 16022367 +MD5 (jmol-11.6-full.tar.gz) = a9f6b656f4f0c998c6d8e605a2037c6b +SHA256 (jmol-11.6-full.tar.gz) = ffabdbcb9d656fe365136da1ad5f40830a4882d355a9efde93fa29383d2bb70f +SIZE (jmol-11.6-full.tar.gz) = 26294021 MD5 (selfSignedCertificate.cer) = ec6c4b413be88a8fab584399cc931d55 SHA256 (selfSignedCertificate.cer) = 0fa14fd5f21593a328ba4439ac17b3b507969d71a2734e392239b83ae8ec2920 SIZE (selfSignedCertificate.cer) = 735 --- pkg-plist.orig 2008-10-13 21:04:13.000000000 +0800 +++ pkg-plist 2008-10-13 21:04:13.000000000 +0800 @@ -16,7 +16,7 @@ %%PORTDOCS%%%%DOCSDIR%%/JmolUserGuide/ch04.html %%PORTDOCS%%%%DOCSDIR%%/JmolUserGuide/index.html %%PORTDOCS%%%%DOCSDIR%%/docbook-xml-4.4.zip -%%PORTDOCS%%%%DOCSDIR%%/docbook-xsl-1.73.2.tar.gz +%%PORTDOCS%%%%DOCSDIR%%/docbook-xsl-1.74.0.tar.gz %%PORTDOCS%%%%DOCSDIR%%/ibm.license.html %%PORTDOCS%%%%DOCSDIR%%/jcfl-1.2.6-source.tar.gz %%PORTDOCS%%%%DOCSDIR%%/jpegEncoder.license @@ -75,10 +75,7 @@ %%JAVAJARDIR%%/Jmol.js %%JAVAJARDIR%%/JmolApplet.jar %%JAVAJARDIR%%/JmolApplet0.jar -%%JAVAJARDIR%%/JmolApplet0_Core.jar -%%JAVAJARDIR%%/JmolApplet0_Jars.jar -%%JAVAJARDIR%%/JmolApplet0_Jvxl.jar -%%JAVAJARDIR%%/JmolApplet0_Main.jar +%%JAVAJARDIR%%/JmolApplet0_Minimize.jar %%JAVAJARDIR%%/JmolApplet0_Popup.jar %%JAVAJARDIR%%/JmolApplet0_Quantum.jar %%JAVAJARDIR%%/JmolApplet0_ReadersCifPdb.jar @@ -87,8 +84,9 @@ %%JAVAJARDIR%%/JmolApplet0_ReadersXml.jar %%JAVAJARDIR%%/JmolApplet0_ShapeBio.jar %%JAVAJARDIR%%/JmolApplet0_ShapeSpecial.jar +%%JAVAJARDIR%%/JmolApplet0_ShapeSurface.jar +%%JAVAJARDIR%%/JmolApplet0_Symmetry.jar %%JAVAJARDIR%%/JmolApplet0_Smiles.jar -%%JAVAJARDIR%%/JmolApplet0_Viewer.jar %%JAVAJARDIR%%/JmolApplet0_i18n.jar %%PORTDOCS%%@dirrm %%DOCSDIR%%/source/xml2po-modes %%PORTDOCS%%@dirrm %%DOCSDIR%%/source/po >Release-Note: >Audit-Trail: >Unformatted: