Date: Sun, 24 Nov 2019 15:53:01 +0000 (UTC) From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r518334 - in head/biology: pbbam pbcopper pbseqan unanimity Message-ID: <201911241553.xAOFr11M071922@repo.freebsd.org>
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Author: jwb Date: Sun Nov 24 15:53:00 2019 New Revision: 518334 URL: https://svnweb.freebsd.org/changeset/ports/518334 Log: biology/unanimity and dependencies: Flag as no longer open source PacBio now provides unanimity only as a binary package through bioconda. See https://github.com/PacificBiosciences/ccs. Modified: head/biology/pbbam/Makefile head/biology/pbcopper/Makefile head/biology/pbseqan/Makefile head/biology/unanimity/Makefile Modified: head/biology/pbbam/Makefile ============================================================================== --- head/biology/pbbam/Makefile Sun Nov 24 15:37:44 2019 (r518333) +++ head/biology/pbbam/Makefile Sun Nov 24 15:53:00 2019 (r518334) @@ -5,7 +5,9 @@ DISTVERSION= 0.18.0 # Test with biology/unanimity befo PORTREVISION= 3 CATEGORIES= biology -MAINTAINER= jwb@FreeBSD.org +# As of March 2018, unanimity is no longer open source. +# See https://github.com/PacificBiosciences/ccs. +MAINTAINER= ports@FreeBSD.org COMMENT= PacBio BAM C++ library, with SWIG bindings LICENSE= BSD3CLAUSE Modified: head/biology/pbcopper/Makefile ============================================================================== --- head/biology/pbcopper/Makefile Sun Nov 24 15:37:44 2019 (r518333) +++ head/biology/pbcopper/Makefile Sun Nov 24 15:53:00 2019 (r518334) @@ -5,7 +5,9 @@ DISTVERSION= 0.4.1 # Test with biology/unanimity befor PORTREVISION= 3 CATEGORIES= biology -MAINTAINER= jwb@FreeBSD.org +# As of March 2018, unanimity is no longer open source. +# See https://github.com/PacificBiosciences/ccs. +MAINTAINER= ports@FreeBSD.org COMMENT= Core C++ library for Pacific Biosciences tools LICENSE= BSD3CLAUSE Modified: head/biology/pbseqan/Makefile ============================================================================== --- head/biology/pbseqan/Makefile Sun Nov 24 15:37:44 2019 (r518333) +++ head/biology/pbseqan/Makefile Sun Nov 24 15:53:00 2019 (r518334) @@ -4,7 +4,9 @@ PORTNAME= pbseqan DISTVERSION= g20171011 CATEGORIES= biology -MAINTAINER= jwb@FreeBSD.org +# As of March 2018, unanimity is no longer open source. +# See https://github.com/PacificBiosciences/ccs. +MAINTAINER= ports@FreeBSD.org COMMENT= Pacific Biosciences patched and stripped down SeqAn LICENSE= BSD3CLAUSE Modified: head/biology/unanimity/Makefile ============================================================================== --- head/biology/unanimity/Makefile Sun Nov 24 15:37:44 2019 (r518333) +++ head/biology/unanimity/Makefile Sun Nov 24 15:53:00 2019 (r518334) @@ -6,7 +6,9 @@ DISTVERSION= 3.4.1 PORTREVISION= 3 CATEGORIES= biology -MAINTAINER= jwb@FreeBSD.org +# As of March 2018, unanimity is no longer open source. +# See https://github.com/PacificBiosciences/ccs. +MAINTAINER= ports@FreeBSD.org COMMENT= Pacific Biosciences consensus library and applications BROKEN= unfetchable
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