Date: Fri, 24 Feb 2006 20:57:31 GMT From: "Pedro F. Giffuni" <giffunip@asme.org> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/93808: Update for matn/py-scientific (non-maintainer) Message-ID: <200602242057.k1OKvVmG067152@www.freebsd.org> Resent-Message-ID: <200602242100.k1OL0H1K023430@freefall.freebsd.org>
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>Number: 93808
>Category: ports
>Synopsis: Update for matn/py-scientific (non-maintainer)
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: sw-bug
>Submitter-Id: current-users
>Arrival-Date: Fri Feb 24 21:00:16 GMT 2006
>Closed-Date:
>Last-Modified:
>Originator: Pedro F. Giffuni
>Release: 6.0-Release (amd64)
>Organization:
>Environment:
FreeBSD etoile.cable.net.co 6.0-RELEASE FreeBSD 6.0-RELEASE #12: Sat Feb 11 13:45:47 COT 2006 root@etoile.cable.net.co:/usr/src/sys/amd64/compile/DIMENSION amd64
>Description:
Builds but otherwise-untested update to py-scientific.
>How-To-Repeat:
>Fix:
patch follows:
diff -ruN py-scientific.orig/Makefile py-scientific/Makefile
--- py-scientific.orig/Makefile Fri Feb 24 15:24:21 2006
+++ py-scientific/Makefile Fri Feb 24 15:25:01 2006
@@ -6,7 +6,7 @@
#
PORTNAME= scientific
-PORTVERSION= 2.4.3
+PORTVERSION= 2.4.9
CATEGORIES= math python
MASTER_SITES= http://starship.python.net/crew/hinsen/ScientificPython/ \
http://dirac.cnrs-orleans.fr/programs/ScientificPython/
diff -ruN py-scientific.orig/distinfo py-scientific/distinfo
--- py-scientific.orig/distinfo Fri Feb 24 15:24:21 2006
+++ py-scientific/distinfo Fri Feb 24 15:25:57 2006
@@ -1,3 +1,3 @@
-MD5 (ScientificPython-2.4.3.tar.gz) = 02b42a0cfa64a6b1c6b5a467eaccd88a
-SHA256 (ScientificPython-2.4.3.tar.gz) = 92ffd96a88eda4f5e6b4cb4c743780327270bc635659a23364b0d5715f0e1b76
-SIZE (ScientificPython-2.4.3.tar.gz) = 494609
+MD5 (ScientificPython-2.4.9.tar.gz) = a88602846bdb8a1e2c9f21dc3cf81341
+SHA256 (ScientificPython-2.4.9.tar.gz) = 139bca0eed3e307d4e5d6b45b4111d2de8964c7ede657c7ea8ce7f7d218097d7
+SIZE (ScientificPython-2.4.9.tar.gz) = 491370
diff -ruN py-scientific.orig/files/patch-Scientific::MPI::core.py py-scientific/files/patch-Scientific::MPI::core.py
--- py-scientific.orig/files/patch-Scientific::MPI::core.py Fri Feb 24 15:24:21 2006
+++ py-scientific/files/patch-Scientific::MPI::core.py Wed Dec 31 19:00:00 1969
@@ -1,11 +0,0 @@
---- Scientific/MPI/core.py.orig Sun Dec 5 11:42:48 2004
-+++ Scientific/MPI/core.py Sun Dec 5 11:43:28 2004
-@@ -315,7 +315,7 @@
- return data, 0, data_tag, len(data)
- raise MPIError, "no message received"
-
-- def receiveString(self, None, source=None, tag=None):
-+ def receiveString(self, _None, source=None, tag=None):
- array, source, tag, length = self.receive(source, tag)
- return array.tostring(), source, tag
-
diff -ruN py-scientific.orig/files/patch-setup.py py-scientific/files/patch-setup.py
--- py-scientific.orig/files/patch-setup.py Fri Feb 24 15:24:21 2006
+++ py-scientific/files/patch-setup.py Fri Feb 24 15:34:38 2006
@@ -1,11 +1,11 @@
---- setup.py~ Fri Jul 4 11:50:18 2003
-+++ setup.py Fri Jul 4 11:51:08 2003
+--- setup.py.orig Mon Oct 18 08:34:00 2004
++++ setup.py Fri Feb 24 15:33:58 2006
@@ -14,7 +14,7 @@
try:
netcdf_prefix=os.environ['NETCDF_PREFIX']
except KeyError:
-- for netcdf_prefix in ['/usr/local', '/usr']:
-+ for netcdf_prefix in [sys.prefix, '/usr']:
+- for netcdf_prefix in ['/usr/local', '/usr', '/sw']:
++ for netcdf_prefix in [sys.prefix, '/usr', '/sw']:
netcdf_include = os.path.join(netcdf_prefix, 'include')
netcdf_lib = os.path.join(netcdf_prefix, 'lib')
if os.path.exists(os.path.join(netcdf_include, 'netcdf.h')):
diff -ruN py-scientific.orig/pkg-plist py-scientific/pkg-plist
--- py-scientific.orig/pkg-plist Fri Feb 24 15:24:21 2006
+++ py-scientific/pkg-plist Fri Feb 24 15:46:25 2006
@@ -87,9 +87,6 @@
%%PYTHON_SITELIBDIR%%/Scientific/IO/__init__.py
%%PYTHON_SITELIBDIR%%/Scientific/IO/__init__.pyc
%%PYTHON_SITELIBDIR%%/Scientific/IO/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Scientific/Installation.py
-%%PYTHON_SITELIBDIR%%/Scientific/Installation.pyc
-%%PYTHON_SITELIBDIR%%/Scientific/Installation.pyo
%%PYTHON_SITELIBDIR%%/Scientific/MPI/IO.py
%%PYTHON_SITELIBDIR%%/Scientific/MPI/IO.pyc
%%PYTHON_SITELIBDIR%%/Scientific/MPI/IO.pyo
@@ -114,18 +111,6 @@
%%PYTHON_SITELIBDIR%%/Scientific/Physics/__init__.py
%%PYTHON_SITELIBDIR%%/Scientific/Physics/__init__.pyc
%%PYTHON_SITELIBDIR%%/Scientific/Physics/__init__.pyo
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/QtPlotCanvas.py
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/QtPlotCanvas.pyc
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/QtPlotCanvas.pyo
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/QtVisualizationCanvas.py
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/QtVisualizationCanvas.pyc
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/QtVisualizationCanvas.pyo
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/Utility.py
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/Utility.pyc
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/Utility.pyo
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/__init__.py
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/__init__.pyc
-%%PYTHON_SITELIBDIR%%/Scientific/QtWidgets/__init__.pyo
%%PYTHON_SITELIBDIR%%/Scientific/Signals/Models.py
%%PYTHON_SITELIBDIR%%/Scientific/Signals/Models.pyc
%%PYTHON_SITELIBDIR%%/Scientific/Signals/Models.pyo
@@ -174,6 +159,9 @@
%%PYTHON_SITELIBDIR%%/Scientific/Visualization/__init__.py
%%PYTHON_SITELIBDIR%%/Scientific/Visualization/__init__.pyc
%%PYTHON_SITELIBDIR%%/Scientific/Visualization/__init__.pyo
+%%PYTHON_SITELIBDIR%%/Scientific/Visualization/PyMOL.py
+%%PYTHON_SITELIBDIR%%/Scientific/Visualization/PyMOL.pyc
+%%PYTHON_SITELIBDIR%%/Scientific/Visualization/PyMOL.pyo
%%PYTHON_SITELIBDIR%%/Scientific/%%PYTHON_PLATFORM%%/Scientific_netcdf.so
%%PYTHON_SITELIBDIR%%/Scientific/__init__.py
%%PYTHON_SITELIBDIR%%/Scientific/__init__.pyc
@@ -252,7 +240,6 @@
@dirrm %%PYTHON_SITELIBDIR%%/Scientific/Threading
@dirrm %%PYTHON_SITELIBDIR%%/Scientific/Statistics
@dirrm %%PYTHON_SITELIBDIR%%/Scientific/Signals
-@dirrm %%PYTHON_SITELIBDIR%%/Scientific/QtWidgets
@dirrm %%PYTHON_SITELIBDIR%%/Scientific/Physics
@dirrm %%PYTHON_SITELIBDIR%%/Scientific/MPI
@dirrm %%PYTHON_SITELIBDIR%%/Scientific/IO
>Release-Note:
>Audit-Trail:
>Unformatted:
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