From owner-freebsd-questions@FreeBSD.ORG  Sat Mar 13 01:07:41 2004
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Date: Sat, 13 Mar 2004 10:07:44 +0100
From: albi <albi@saynotomicrosoft.org>
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Subject: Re: Major Problems
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On Sat, 13 Mar 2004 02:13:26 -0600 (CST)
Hermes Trismegistus <hermes@trismegistus.net> wrote:

> After I run my cvsup on my ports, I get this kind of stderr at the CLI
> when I run the "portsdb -Uu":
> 
> --------------just a small snip of the errors------------------
> make_index: ifm-4.1_2: no entry for /usr/ports/x11-toolkits/tk84
> make_index: gnomeblog-0.7_1: no entry for
> /usr/ports/x11-toolkits/py-gtk2 make_index: gnomeblog-0.7_1: no entry
> for/usr/ports/x11/XFree86-4-libraries
> make_index: gnomeblog-0.7_1: no entry for /usr/ports/misc/gnomehier
> make_index: gnomeblog-0.7_1: no entry for
> /usr/ports/x11-toolkits/py-gtk2 make_index: gnomeblog-0.7_1: no entry
> for/usr/ports/x11/XFree86-4-libraries
> Warning: Duplicate INDEX entry: *** Error code 1
> Warning: Duplicate INDEX entry:

if you think there's something wrong with your ports-dir, why don't you
rm-rf/usr/ports and start with a new one from scratch?
and have you considered "upgrading" to 5.2.x ?