Date: Mon, 15 Jul 2019 21:38:03 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-armv6-default][science/molsketch] Failed for molsketch-0.6.0 in build/runaway Message-ID: <201907152138.x6FLc3su093830@beefy8.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/molsketch/Makefile 496247 2019-03-19 06:19:42Z yuri $ Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p506263_s349853/logs/molsketch-0.6.0.log Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p506263_s349853 Log: =>> Building science/molsketch build started at Mon Jul 15 15:34:28 UTC 2019 port directory: /usr/ports/science/molsketch package name: molsketch-0.6.0 building for: FreeBSD head-armv6-default-job-20 13.0-CURRENT FreeBSD 13.0-CURRENT 1300035 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/molsketch/Makefile 496247 2019-03-19 06:19:42Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300018 Jail OSVERSION: 1300035 Job Id: 20 !!! Jail is newer than host. (Jail: 1300035, Host: 1300018) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1300035 UNAME_v=FreeBSD 13.0-CURRENT 1300035 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv6-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for molsketch-0.6.0: DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/science/molsketch/work/Molsketch-0.6.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/molsketch/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/molsketch/work HOME=/wrkdirs/usr/ports/science/molsketch/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/molsketch/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- QT_SELECT=qt5 QMAKEMODULES="/wrkdirs/usr/ports/science/molsketch/work/Molsketch-0.6.0/mkspecs/modules:/usr/local/lib/qt5/mkspecs/modules" XDG_DATA_HOME=/wrkdirs/usr/ports/science/molsketch/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/molsketch/work HOME=/wrkdirs/usr/ports/science/molsketch/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/molsketch/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/molsketch/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/ local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" CMAKE_BUILD_TYPE="release" QT_BINDIR="lib/qt5/bin" QT_INCDIR="include/qt5" QT_LIBDIR="lib/qt5" QT_ARCHDIR="lib/qt5" QT_PLUGINDIR="lib/qt5/plugins" QT_LIBEXECDIR="libexec/qt5" QT_IMPORTDIR="lib/qt5/imports" QT_QMLDIR="lib/qt5/qml" QT_DATADIR="share/qt5" QT_DOCDIR="share/doc/qt5" QT_L10NDIR="share/qt5/translations" QT_EXAMPLEDIR="share/examples/qt5" QT_TESTDIR="share/qt5/tests" QT_MKSPECDIR="lib/qt5/mkspecs" QT_QTCHOOSERDIR="etc/xdg/qtchooser" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/molsketch" EXAMPLESDIR="share/examples/molsketch" DATADIR="share/molsketch" WWWDIR="www/molsketch" ETCDIR="etc/molsketch" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/molsketch DOCSDIR=/usr/local/share/doc/molsketch EXAMPLESDIR=/usr/local/share/examples/molsketch WWWDIR=/usr/local/www/molsketch ETCDIR=/usr/local/etc/molsketch --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 # stable/10 includes src.conf too late but make.conf is in sys.mk .if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*} # Disable build of llib now that head no longer has lint(1) LINT= true .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 8.0.1 (branches/release_80 364487) (based on LLVM 8.0.1) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 8.0.1 (branches/release_80 364487) (based on LLVM 8.0.1) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 8.0.1 (branches/release_80 364487) (based on LLVM 8.0.1) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv6 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300035 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> molsketch-0.6.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz [head-armv6-default-job-20] Installing pkg-1.11.1... [head-armv6-default-job-20] Extracting pkg-1.11.1: .......... done ===> molsketch-0.6.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of molsketch-0.6.0 =========================================================================== =======================<phase: fetch-depends >============================ <snip> The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/site/index.html, if documentation was installed). Message from trousers-0.3.14_2: To run tcsd automatically, add the following line to /etc/rc.conf: tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. If you want to use tcsd with software TPM emulator, use the following configuration in /etc/rc.conf: tcsd_enable="YES" tcsd_mode="emulator" tpmd_enable="YES" To use TPM, add your_account to '_tss' group like following: # pw groupmod _tss -m your_account Message from dejavu-2.37_1: Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Message from wx30-gtk3-3.0.4_7: ===> NOTICE: The wx30-gtk3 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> molsketch-0.6.0 depends on shared library: libopenbabel.so - found (/usr/local/lib/libopenbabel.so) ===> Returning to build of molsketch-0.6.0 ===> molsketch-0.6.0 depends on shared library: libQt5Core.so - not found ===> Installing existing package /packages/All/qt5-core-5.12.2_1.txz [head-armv6-default-job-20] Installing qt5-core-5.12.2_1... [head-armv6-default-job-20] `-- Installing etc_os-release-0.1_2... [head-armv6-default-job-20] `-- Extracting etc_os-release-0.1_2: . done [head-armv6-default-job-20] `-- Installing pcre2-10.32_1... [head-armv6-default-job-20] `-- Extracting pcre2-10.32_1: .......... done [head-armv6-default-job-20] Extracting qt5-core-5.12.2_1: .......... done ===> molsketch-0.6.0 depends on shared library: libQt5Core.so - found (/usr/local/lib/qt5/libQt5Core.so) ===> Returning to build of molsketch-0.6.0 ===> molsketch-0.6.0 depends on shared library: libQt5Gui.so - not found ===> Installing existing package /packages/All/qt5-gui-5.12.2.txz [head-armv6-default-job-20] Installing qt5-gui-5.12.2... [head-armv6-default-job-20] `-- Installing qt5-dbus-5.12.2... [head-armv6-default-job-20] `-- Extracting qt5-dbus-5.12.2: .......... done [head-armv6-default-job-20] `-- Installing qt5-network-5.12.2_1... [head-armv6-default-job-20] `-- Extracting qt5-network-5.12.2_1: .......... done [head-armv6-default-job-20] `-- Installing xcb-util-image-0.4.0_1... [head-armv6-default-job-20] | `-- Installing xcb-util-0.4.0_2,1... [head-armv6-default-job-20] | `-- Extracting xcb-util-0.4.0_2,1: .......... done [head-armv6-default-job-20] `-- Extracting xcb-util-image-0.4.0_1: .......... done [head-armv6-default-job-20] `-- Installing xcb-util-keysyms-0.4.0_1... [head-armv6-default-job-20] `-- Extracting xcb-util-keysyms-0.4.0_1: ......... done [head-armv6-default-job-20] `-- Installing xcb-util-renderutil-0.3.9_1... [head-armv6-default-job-20] `-- Extracting xcb-util-renderutil-0.3.9_1: ......... done [head-armv6-default-job-20] `-- Installing xcb-util-wm-0.4.1_3... [head-armv6-default-job-20] `-- Extracting xcb-util-wm-0.4.1_3: .......... done [head-armv6-default-job-20] `-- Installing xdg-utils-1.1.3_1... [head-armv6-default-job-20] | `-- Installing xprop-1.2.4... [head-armv6-default-job-20] | `-- Extracting xprop-1.2.4: ..... done [head-armv6-default-job-20] | `-- Installing xset-1.2.4_2... [head-armv6-default-job-20] | | `-- Installing libXfontcache-1.0.5_5... [head-armv6-default-job-20] | | `-- Extracting libXfontcache-1.0.5_5: .......... done [head-armv6-default-job-20] | | `-- Installing libXmu-1.1.3,1... [head-armv6-default-job-20] | | `-- Extracting libXmu-1.1.3,1: .......... done [head-armv6-default-job-20] | `-- Extracting xset-1.2.4_2: .. done [head-armv6-default-job-20] `-- Extracting xdg-utils-1.1.3_1: .......... done [head-armv6-default-job-20] Extracting qt5-gui-5.12.2: .......... done ===> molsketch-0.6.0 depends on shared library: libQt5Gui.so - found (/usr/local/lib/qt5/libQt5Gui.so) ===> Returning to build of molsketch-0.6.0 ===> molsketch-0.6.0 depends on shared library: libQt5Network.so - found (/usr/local/lib/qt5/libQt5Network.so) ===> molsketch-0.6.0 depends on shared library: libQt5PrintSupport.so - not found ===> Installing existing package /packages/All/qt5-printsupport-5.12.2.txz [head-armv6-default-job-20] Installing qt5-printsupport-5.12.2... [head-armv6-default-job-20] `-- Installing qt5-widgets-5.12.2... [head-armv6-default-job-20] `-- Extracting qt5-widgets-5.12.2: .......... done [head-armv6-default-job-20] Extracting qt5-printsupport-5.12.2: .......... done ===> molsketch-0.6.0 depends on shared library: libQt5PrintSupport.so - found (/usr/local/lib/qt5/libQt5PrintSupport.so) ===> Returning to build of molsketch-0.6.0 ===> molsketch-0.6.0 depends on shared library: libQt5Svg.so - not found ===> Installing existing package /packages/All/qt5-svg-5.12.2.txz [head-armv6-default-job-20] Installing qt5-svg-5.12.2... [head-armv6-default-job-20] Extracting qt5-svg-5.12.2: .......... done ===> molsketch-0.6.0 depends on shared library: libQt5Svg.so - found (/usr/local/lib/qt5/libQt5Svg.so) ===> Returning to build of molsketch-0.6.0 ===> molsketch-0.6.0 depends on shared library: libQt5Widgets.so - found (/usr/local/lib/qt5/libQt5Widgets.so) =========================================================================== =======================<phase: configure >============================ ===> Configuring for molsketch-0.6.0 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/molsketch/work/.build CMake Deprecation Warning at CMakeLists.txt:3 (cmake_policy): The OLD behavior for policy CMP0005 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Deprecation Warning at CMakeLists.txt:4 (cmake_policy): The OLD behavior for policy CMP0020 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- The C compiler identification is Clang 8.0.1 -- The CXX compiler identification is Clang 8.0.1 -- Check for working C compiler: /nxb-bin/usr/bin/cc -- Check for working C compiler: /nxb-bin/usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Using Qt5. Use option "-D FORCEQt4=TRUE" to switch to Qt4. -- ======= Welcome to Molsketch build ======= -- Sources in: /wrkdirs/usr/ports/science/molsketch/work/Molsketch-0.6.0 -- Installation settings and corresponding cmake variables (use "-D <variableName>=<value>" to change): -- "Global prefix": MSK_PREFIX = /usr/local -- "Executable destination dir": MSK_INSTALL_BINS = /usr/local/bin -- "Headers destination dir": MSK_INSTALL_INCLUDES = /usr/local/include -- "Documentation destination dir": MSK_INSTALL_DOCS = /usr/local/share/doc/molsketch -- "Libraries (64bit) destination dir": MSK_INSTALL_LIBS64 = /usr/local/lib/molsketch -- "Libraries (32bit) destination dir": MSK_INSTALL_LIBS = /usr/local/lib/molsketch -- "Build OpenBabel interface": MSK_OBABELIFACE = true -- "Build static application": MSK_STATIC_LIB = false -- Found PkgConfig: pkgconf (found version "1.6.1") -- Checking for module 'openbabel-2.0' -- Found openbabel-2.0, version 2.4.1 -- Querying include dir: /usr/local/include/openbabel-2.0 -- OpenBabel include dir: /usr/local/include/openbabel-2.0 -- OpenBabel include dir2: /usr/local/include/openbabel-2.0 -- OpenBabel include dir3: /usr/local/include/openbabel-2.0 -- Found OpenBabel2: openbabel -- Found OpenBabel Trunk with graphsym.h -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /wrkdirs/usr/ports/science/molsketch/work/.build =========================================================================== =======================<phase: build >============================ ===> Building for molsketch-0.6.0 =>> Killing runaway build after 21600 seconds with no output
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