From owner-freebsd-ports@freebsd.org Wed Jun 28 12:08:45 2017 Return-Path: Delivered-To: freebsd-ports@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 5D946DA0C80 for ; Wed, 28 Jun 2017 12:08:45 +0000 (UTC) (envelope-from david@catwhisker.org) Received: from albert.catwhisker.org (mx.catwhisker.org [198.144.209.73]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 0CF3E7672E; Wed, 28 Jun 2017 12:08:44 +0000 (UTC) (envelope-from david@catwhisker.org) Received: from albert.catwhisker.org (localhost [127.0.0.1]) by albert.catwhisker.org (8.15.2/8.15.2) with ESMTP id v5SC8hTF040655; Wed, 28 Jun 2017 12:08:43 GMT (envelope-from david@albert.catwhisker.org) Received: (from david@localhost) by albert.catwhisker.org (8.15.2/8.15.2/Submit) id v5SC8htm040654; Wed, 28 Jun 2017 05:08:43 -0700 (PDT) (envelope-from david) Date: Wed, 28 Jun 2017 05:08:43 -0700 From: David Wolfskill To: freebsd-ports@freebsd.org Subject: math/R: Build failure after PORTREVISION for shlib change Message-ID: <20170628120843.GG1241@albert.catwhisker.org> MIME-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; protocol="application/pgp-signature"; boundary="DtJW00gg9Uj+27As" Content-Disposition: inline User-Agent: Mutt/1.8.3 (2017-05-23) X-BeenThere: freebsd-ports@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: Porting software to FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 28 Jun 2017 12:08:45 -0000 --DtJW00gg9Uj+27As Content-Type: text/plain; charset=us-ascii Content-Disposition: inline Content-Transfer-Encoding: quoted-printable Running: FreeBSD g1-227.catwhisker.org 11.1-BETA3 FreeBSD 11.1-BETA3 #383 r320438M/= 320450:1100514: Wed Jun 28 03:56:53 PDT 2017 root@g1-227.catwhisker.org= :/common/S1/obj/usr/src/sys/CANARY amd64 with /usr/ports working copy: g1-227(11.1)[4] svn info /usr/ports/ Path: /usr/ports Working Copy Root Path: /usr/ports URL: file:///svn/freebsd/ports/head Relative URL: ^/head Repository Root: file:///svn/freebsd/ports Repository UUID: 35697150-7ecd-e111-bb59-0022644237b5 Revision: 444562 Node Kind: directory Schedule: normal Last Changed Author: jbeich Last Changed Rev: 444562 Last Changed Date: 2017-06-28 02:58:37 -0700 (Wed, 28 Jun 2017) (Repo is a local mirror, updated overnight.) After updating all other installed ports and setting 'MAKE_JOBS_UNSAFE=3Dyes', I tried (again) for math/R and databases/R-cran-DBI; math/R fails: =2E.. making xmalloc.d from xmalloc.c gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c regcomp.c -o regcomp.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c regerror.c -o regerror.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c regexec.c -o regexec.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-ast.c -o tre-ast.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-compile.c -o tre-compile.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-match-approx.c -o tre-match-approx.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-match-parallel.c -o tre-match-parallel.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-mem.c -o tre-mem.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-parse.c -o tre-parse.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c tre-stack.c -o tre-stack.o gcc5 -I. -I. -I../../../src/include -I../../../src/include -DLIBICONV_PLUG = -I/usr/local/include -isystem /usr/local/include -DHAVE_CONFIG_H -fopenmp = -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector -Wl,-rpath=3D/usr/local= /lib/gcc5 -isystem /usr/local/include -fno-strict-aliasing -flto -fvisibili= ty=3Dhidden -c xmalloc.c -o xmalloc.o /usr/local/bin/gcc-ar5 -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.= o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel= =2Eo tre-mem.o tre-parse.o tre-stack.o xmalloc.o ar: unrecognized option `--plugin' usage: ar -d [-Tjsvz] archive file ... ar -m [-Tjsvz] archive file ... ar -m [-Tabijsvz] position archive file ... ar -p [-Tv] archive [file ...] ar -q [-TcDjsUvz] archive file ... ar -r [-TcDjsUuvz] archive file ... ar -r [-TabcDijsUuvz] position archive file ... ar -s [-jz] archive ar -t [-Tv] archive [file ...] ar -x [-CTouv] archive [file ...] ar -V *** Error code 64 Stop. make[6]: stopped in /common/ports/math/R/work/R-3.4.0/src/extra/tre *** Error code 1 [and things don't improve after that.] Poking around, I see: g1-227(11.1)[3] pkg which /usr/local/bin/gcc-ar5 /usr/local/bin/gcc-ar5 was installed by package gcc5-5.4.0_2 I confess I don't really see (from the command listed) how gcc-ar5 thought it was being told to use the '--plugin' option, but ... . Most recent update to the math/R port was to the Makefile: ------------------------------------------------------------------------ r444463 | sunpoet | 2017-06-27 06:46:53 -0700 (Tue, 27 Jun 2017) | 11 lines Update devel/readline to 7.0 patch 3 - Bump PORTREVISION for shlib change Changes: https://cnswww.cns.cwru.edu/php/chet/readline/CHANGES https://lists.gnu.org/archive/html/bug-bash/2016-09/msg0010= 7.html https://lists.gnu.org/archive/html/bug-readline/2017-01/msg= 00002.html Differential Revision: https://reviews.freebsd.org/D11172 PR: 219947 Exp-run by: antoine ------------------------------------------------------------------------ Suggestions for getting math/R (and, I presume, databases/R-cran-DBI) to build? Thanks! Peace, david --=20 David H. Wolfskill david@catwhisker.org I look forward to voting against Trump again at the earliest opportunity. See http://www.catwhisker.org/~david/publickey.gpg for my public key. --DtJW00gg9Uj+27As Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- Version: GnuPG v2 iQF8BAEBCgBmBQJZU5xLXxSAAAAAAC4AKGlzc3Vlci1mcHJAbm90YXRpb25zLm9w ZW5wZ3AuZmlmdGhob3JzZW1hbi5uZXRDQ0I3Q0VGOTE3QTgwMUY0MzA2NEQ3N0Ix NTM5Q0M0MEEwNDlFRTE3AAoJEBU5zECgSe4XGbwH/0Src3JbaHqCDq+Tzk6/OH5b fgixTz+ZsJljQNVBDj1IayO2bwO+odD03zLsT8YDhRXR+jFAzeTLVjo9JZ8NYgBt htPsRfi0Gu0snCqyjCSiGIy2LVyzLkN0bL7nfTEvT8WpaDBgD2f61pk+ETKpHVpx t0Nzq6DHnAoQhlcj7pfvljDSbIHXnT9jHV2l56RcRMfARNDPzpNfUWlYV43SdbUb qEWQQrSBU2vJgkBEu+PHgNxKZPnBDcBUkR2aaUxD55+aBBhEMCZG2YSxrwZ+p9pd DpIWB5hMGO+z4SfabiYXV1cZ5jntTxjjQGAfkjQJwC2I44RaCOrs9HB1/jnR7Qo= =D0E9 -----END PGP SIGNATURE----- --DtJW00gg9Uj+27As--