From nobody Wed Jan 10 16:06:21 2024 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4T9CMx3L68z57FwD; Wed, 10 Jan 2024 16:06:21 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4T9CMx1T4Lz54cB; Wed, 10 Jan 2024 16:06:21 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1704902781; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=JJkesrIdiKu4+Of7xBQ8wJG1Wa6JCUkIRarYkfrQtTo=; b=NJiebpNETPWFQ9n537tg8SrFBdyFYu/qEPxDsnaKgmZp/Jyo47ix6KHWGDsKJfoVHWqUiJ IQ6iVJ2/No9pM2oDrhGZ2yNDEfL3Yve9gRxv0jZTR+5vVW1Cmc3W1+SancexVua01hNRNL 4om5ihFYxLH+TrntY24qu91gtV0YGCtH0u3paZQTZ9dKSfB/ZdTKn9F5ux88FhsqZYdKu0 cRiUGuvahcgwOr1nk1chX5mdiJwzM5OJ5iaZAcwMwsPKZ6deplvbPEoTWndCpz0uLtngsI rcP/y2aY2TvJe1L83OmGiMRPz3eJpGSJogRVkbo0BfwYHJccFRcsK9hgV+MlWA== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1704902781; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=JJkesrIdiKu4+Of7xBQ8wJG1Wa6JCUkIRarYkfrQtTo=; b=TWwJ/LhZekjzPFrfU2VYlozWz/A8vqCWpOQk+y1pSBC7vXlObwSMOhZHnNne2RQ5z3KUlq TNzhjVd3P1e1PVFgnhgMCPKzmTuCmHN8dp3J77wOYuVAhj11VDBkytkmdohLgi5/LTOYeP 6M0g6CZm475cv1WLLsp4GnvWfySrBCKcTAaSTG0gc1Y/7M/kwSpFTzrJYHXEmr2OozDmG3 8wPkq/5TfMyv2cgp28GzKOHVUbgF92FckQJlCXn9PTBHlRpXWLlYwK6C2Scky/xKAraf1F uFJTGDEkA/lX/QapKXxFkXpmt94cH9eoaOr8nCgSrmiyUvexQx96kbMHWSI8qw== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1704902781; a=rsa-sha256; cv=none; b=NEZk2AZBdi7O2ZkPy5DTc4d3BadatKy2gUbSnL3CjN2k3A3Mwd/OeFA8KjEsVkJawgp5p9 OG6DfRdtLSG/ehqMIlc/ubfVQ9TPqLrnVBFFthJfoXwB5pydUhf8M+1OA/G3A4Gyz+Bygm 6tr3lrICSf+5N6ncbVtKwr540N7aXckVID0hogTqTQMgu/oO/v0sADKRwLDToW56HIw9ob /imaBy+gAQj5s6k7J/iOg6uWDSd2m/BUkDIMH3lg/tRljVTmIAs/TK/0o9h1sKcBA+vkJT 3JQ5cE5X3Ownh0T6c3dpUdSpiszVVyzK96EIEXIIPYea/No22RVw4fDaIvLMow== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4T9CMx0Y63zhq6; Wed, 10 Jan 2024 16:06:21 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 40AG6LTx018424; Wed, 10 Jan 2024 16:06:21 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 40AG6LIC018421; Wed, 10 Jan 2024 16:06:21 GMT (envelope-from git) Date: Wed, 10 Jan 2024 16:06:21 GMT Message-Id: <202401101606.40AG6LIC018421@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: 999c86b25114 - main - biology/atac-seq: Update to 0.2.0 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 999c86b2511492b85bac5a25fbcc60b38542afee Auto-Submitted: auto-generated The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=999c86b2511492b85bac5a25fbcc60b38542afee commit 999c86b2511492b85bac5a25fbcc60b38542afee Author: Jason W. Bacon AuthorDate: 2024-01-10 16:05:41 +0000 Commit: Jason W. Bacon CommitDate: 2024-01-10 16:05:41 +0000 biology/atac-seq: Update to 0.2.0 Add biology/py-macs3 dep to metaport --- biology/atac-seq/Makefile | 8 +++++++- biology/atac-seq/distinfo | 2 +- 2 files changed, 8 insertions(+), 2 deletions(-) diff --git a/biology/atac-seq/Makefile b/biology/atac-seq/Makefile index b8721671f6ac..359d4c750a03 100644 --- a/biology/atac-seq/Makefile +++ b/biology/atac-seq/Makefile @@ -1,5 +1,5 @@ PORTNAME= atac-seq -DISTVERSION= 0.1.3 +DISTVERSION= 0.2.0 CATEGORIES= biology python MASTER_SITES= # empty @@ -25,4 +25,10 @@ RUN_DEPENDS= sra-tools>0:biology/sra-tools \ USES= metaport python +.include + +.if ${OPSYS} != FreeBSD || ${OSVERSION} >= 1302509 +RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}MACS3>0:biology/py-macs3@${PY_FLAVOR} +.endif + .include diff --git a/biology/atac-seq/distinfo b/biology/atac-seq/distinfo index 0195f78851af..968e68a80fb0 100644 --- a/biology/atac-seq/distinfo +++ b/biology/atac-seq/distinfo @@ -1 +1 @@ -TIMESTAMP = 1690554875 +TIMESTAMP = 1704902712