Date: Sat, 25 Aug 2018 22:54:54 +0000 (UTC) From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r478089 - head/biology/unanimity Message-ID: <201808252254.w7PMssNW006900@repo.freebsd.org>
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Author: jwb Date: Sat Aug 25 22:54:54 2018 New Revision: 478089 URL: https://svnweb.freebsd.org/changeset/ports/478089 Log: biology/unanimity: Upgrade to latest release, soften dep version requirements Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D16902 Modified: head/biology/unanimity/Makefile head/biology/unanimity/distinfo Modified: head/biology/unanimity/Makefile ============================================================================== --- head/biology/unanimity/Makefile Sat Aug 25 21:38:00 2018 (r478088) +++ head/biology/unanimity/Makefile Sat Aug 25 22:54:54 2018 (r478089) @@ -1,9 +1,9 @@ # $FreeBSD$ -PORTNAME= unanimity -DISTVERSION= g20180307 -PORTREVISION= 1 -CATEGORIES= biology +PORTNAME= unanimity +DISTVERSIONPREFIX= v +DISTVERSION= 3.1.0 +CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= Pacific Biosciences consensus library and applications @@ -14,16 +14,15 @@ LICENSE_FILE= ${WRKSRC}/LICENSE BROKEN_aarch64= fails to compile: mmintrin.h:47:5: use of undeclared identifier '__builtin_ia32_emms'; did you mean '__builtin_isless'? # Sensitive to dependency versions, use latest commit for everything -BUILD_DEPENDS= pbseqan==g20171002:biology/pbseqan \ - pbbam==g20180416:biology/pbbam \ - pbcopper==g20180413:biology/pbcopper +BUILD_DEPENDS= pbseqan>=g20171002:biology/pbseqan \ + pbbam>=g20180416:biology/pbbam \ + pbcopper>=g20180413:biology/pbcopper LIB_DEPENDS= libhts.so:biology/htslib \ libboost_regex.so:devel/boost-libs USES= cmake pkgconfig python USE_GITHUB= yes GH_ACCOUNT= PacificBiosciences -GH_TAGNAME= 6f11a13e1472b8c00337ba8c5e94bf83bdab31d6 CMAKE_ARGS+= -DHTSLIB_INCLUDE_DIRS:STRING=${LOCALBASE}/include/htslib \ -DHTSLIB_LIBRARIES:STRING="-L${LOCALBASE}/lib -lhts" \ Modified: head/biology/unanimity/distinfo ============================================================================== --- head/biology/unanimity/distinfo Sat Aug 25 21:38:00 2018 (r478088) +++ head/biology/unanimity/distinfo Sat Aug 25 22:54:54 2018 (r478089) @@ -1,3 +1,3 @@ -TIMESTAMP = 1524324354 -SHA256 (PacificBiosciences-unanimity-g20180307-6f11a13e1472b8c00337ba8c5e94bf83bdab31d6_GH0.tar.gz) = 20ed61c46afcfe86403a564136b96f909149208c51fde16f608e924ad4c59e38 -SIZE (PacificBiosciences-unanimity-g20180307-6f11a13e1472b8c00337ba8c5e94bf83bdab31d6_GH0.tar.gz) = 6492231 +TIMESTAMP = 1534907295 +SHA256 (PacificBiosciences-unanimity-v3.1.0_GH0.tar.gz) = 355866bd3f83bf1f7c322269c01d3c2f943e30942455741d6e802b0ad3f89912 +SIZE (PacificBiosciences-unanimity-v3.1.0_GH0.tar.gz) = 6493202
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