Date: Fri, 10 Jul 2020 09:45:49 +0000 (UTC) From: =?UTF-8?Q?Fernando_Apestegu=c3=ada?= <fernape@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r541852 - head/biology/phyml Message-ID: <202007100945.06A9jnrH025307@repo.freebsd.org>
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Author: fernape Date: Fri Jul 10 09:45:48 2020 New Revision: 541852 URL: https://svnweb.freebsd.org/changeset/ports/541852 Log: biology/phyml: update to 3.3.20200621 From ChangeLog: https://github.com/stephaneguindon/phyml/releases/tag/v3.3.20200621 This release fixes a few minor bugs (see recent commits). The manual also gives extra XML configuration information in order to apply fancy substitution models (e.g., CAT-like) on single- or multiple-gene data sets Reported by: portscout Modified: head/biology/phyml/Makefile head/biology/phyml/distinfo Modified: head/biology/phyml/Makefile ============================================================================== --- head/biology/phyml/Makefile Fri Jul 10 09:42:07 2020 (r541851) +++ head/biology/phyml/Makefile Fri Jul 10 09:45:48 2020 (r541852) @@ -3,8 +3,7 @@ PORTNAME= phyml DISTVERSIONPREFIX= v -DISTVERSION= 3.3.20190909 -PORTREVISION= 3 +DISTVERSION= 3.3.20200621 PORTEPOCH= 1 CATEGORIES= biology @@ -22,9 +21,9 @@ GH_ACCOUNT= stephaneguindon GNU_CONFIGURE= yes CONFIGURE_ARGS= --disable-beagle --disable-native +PLIST_FILES= bin/phyml${BIN_SUFFIX} PORTDOCS= * PORTEXAMPLES= * -PLIST_FILES= bin/phyml${BIN_SUFFIX} OPTIONS_DEFINE= DOCS EXAMPLES OPTIONS_RADIO= MPI Modified: head/biology/phyml/distinfo ============================================================================== --- head/biology/phyml/distinfo Fri Jul 10 09:42:07 2020 (r541851) +++ head/biology/phyml/distinfo Fri Jul 10 09:45:48 2020 (r541852) @@ -1,3 +1,3 @@ -TIMESTAMP = 1568127899 -SHA256 (stephaneguindon-phyml-v3.3.20190909_GH0.tar.gz) = f3afd6d5332cd98298736b3c6df63d751fa74388a0e972ec08f63a032d5e6a9c -SIZE (stephaneguindon-phyml-v3.3.20190909_GH0.tar.gz) = 2237651 +TIMESTAMP = 1594372740 +SHA256 (stephaneguindon-phyml-v3.3.20200621_GH0.tar.gz) = ffbecbc716fe7dd3e25493d2ebc1aab42ff3c33fc6fffca0920a950d38d74e22 +SIZE (stephaneguindon-phyml-v3.3.20200621_GH0.tar.gz) = 2234125
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