Date: Fri, 1 May 2020 17:33:42 +0000 (UTC) From: Thierry Thomas <thierry@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r533569 - in head/math: . linbox Message-ID: <202005011733.041HXgWg052361@repo.freebsd.org>
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Author: thierry Date: Fri May 1 17:33:42 2020 New Revision: 533569 URL: https://svnweb.freebsd.org/changeset/ports/533569 Log: Adding LinBox, a library for exact computational linear algebra. To be used with SageMath. Added: head/math/linbox/ head/math/linbox/Makefile (contents, props changed) head/math/linbox/distinfo (contents, props changed) head/math/linbox/pkg-descr (contents, props changed) head/math/linbox/pkg-plist (contents, props changed) Modified: head/math/Makefile Modified: head/math/Makefile ============================================================================== --- head/math/Makefile Fri May 1 17:25:04 2020 (r533568) +++ head/math/Makefile Fri May 1 17:33:42 2020 (r533569) @@ -378,6 +378,7 @@ SUBDIR += libxlsxwriter SUBDIR += libxsmm SUBDIR += lidia + SUBDIR += linbox SUBDIR += linpack SUBDIR += lis SUBDIR += lll_spect Added: head/math/linbox/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/linbox/Makefile Fri May 1 17:33:42 2020 (r533569) @@ -0,0 +1,74 @@ +# Created by: thierry@pompo.net +# $FreeBSD$ + +PORTNAME= linbox +PORTVERSION= 1.6.3 +DISTVERSIONPREFIX= v +CATEGORIES= math + +MAINTAINER= thierry@FreeBSD.org +COMMENT= C++ library for exact, high-performance linear algebra + +LICENSE= GPLv2 LGPL21 +LICENSE_COMB= dual + +BUILD_DEPENDS= fflas-ffpack-config:math/fflas-ffpack +LIB_DEPENDS= libgmp.so:math/gmp \ + libgivaro.so:math/givaro +RUN_DEPENDS= bash:shells/bash + +USE_GITHUB= yes +GH_ACCOUNT= linbox-team + +USES= autoreconf blaslapack:openblas compiler:c++11-lang gmake libtool localbase pkgconfig shebangfix + +SHEBANG_FILES= benchmarks/perfpublisher.sh examples/test.sh \ + linbox-auto-install.sh linbox-config.in tests/jenkins-maker.sh \ + tests/perfpublisher.sh tests/test_leak.sh + +OPTIONS_DEFINE= DOXYGEN +OPTIONS_RADIO= SIZE +OPTIONS_RADIO_SIZE= FULL MIN +OPTIONS_DEFAULT= FULL +OPTIONS_SUB= yes + +MIN_DESC= Lightweight package, with less dependencies +MIN_CONFIGURE_ON= --without-saclib + +FULL_DESC= Complete package with all its dependencies +FULL_BUILD_DEPENDS= gnuplot:math/gnuplot +FULL_LIB_DEPENDS= libflint.so:math/flint2 \ + libfplll.so:math/fplll \ + libiml.so:math/iml \ + libm4ri.so:math/m4ri \ + libm4rie.so:math/m4rie \ + libmpfr.so:math/mpfr \ + libntl.so:math/ntl \ + libtinyxml2.so:textproc/tinyxml2 +FULL_RUN_DEPENDS= gnuplot:math/gnuplot +FULL_USES= ghostscript +FULL_CONFIGURE_WITH= flint fplll ghostscript gnuplot iml m4ri m4rie mpfr ntl + +DOXYGEN_VARS= BINARY_ALIAS=sed=${LOCALBASE}/bin/gsed +DOXYGEN_CONFIGURE_ENABLE=doc +DOXYGEN_CONFIGURE_WITH= docdir=${DOCSDIR} +DOXYGEN_BUILD_DEPENDS= gsed:textproc/gsed \ + dot:graphics/graphviz \ + doxygen:devel/doxygen + +GNU_CONFIGURE= yes +# ATM expat and drivers are broken +CONFIGURE_ARGS= --without-expat +USE_LDCONFIG= yes +TEST_TARGET= check + +.if defined(PACKAGE_BUILDING) +CONFIGURE_ARGS+=--disable-sse --disable-sse2 --disable-sse3 --disable-ssse3 \ + --disable-sse41 --disable-sse42 --disable-fma --disable-fma4 \ + --disable-avx --disable-avx2 +.endif + +pre-configure: + ${REINPLACE_CMD} -e 's|@LINBOXSAGE_LIBS@||' ${WRKSRC}/linbox.pc.in + +.include <bsd.port.mk> Added: head/math/linbox/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/linbox/distinfo Fri May 1 17:33:42 2020 (r533569) @@ -0,0 +1,3 @@ +TIMESTAMP = 1588262204 +SHA256 (linbox-team-linbox-v1.6.3_GH0.tar.gz) = ad3867b75b13c139ad30ccb9ade68a0a9c158ca99deb69d81cce1646f58e3b5e +SIZE (linbox-team-linbox-v1.6.3_GH0.tar.gz) = 2311437 Added: head/math/linbox/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/linbox/pkg-descr Fri May 1 17:33:42 2020 (r533569) @@ -0,0 +1,9 @@ +LinBox is a C++ template library for exact, high-performance linear algebra +computation with dense, sparse, and structured matrices over the integers and +over finite fields. + +LinBox relies on closely aligned libraries fflas-ffpack (exact dense matrix +linear algebra kernels), and Givaro (finite fields, integers, and polynomials). + +WWW: https://linalg.org/ +WWW: https://github.com/linbox-team/linbox Added: head/math/linbox/pkg-plist ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/linbox/pkg-plist Fri May 1 17:33:42 2020 (r533569) @@ -0,0 +1,4247 @@ +bin/linbox-config +include/linbox/algorithms/alt-blackbox-block-container.h +include/linbox/algorithms/bbcharpoly.h +include/linbox/algorithms/bitonic-sort.h +include/linbox/algorithms/blackbox-block-container-base.h +include/linbox/algorithms/blackbox-block-container.h +include/linbox/algorithms/blackbox-container-base.h +include/linbox/algorithms/blackbox-container-symmetric.h +include/linbox/algorithms/blackbox-container-symmetrize.h +include/linbox/algorithms/blackbox-container.h +include/linbox/algorithms/block-coppersmith-domain.h +include/linbox/algorithms/block-lanczos.h +include/linbox/algorithms/block-lanczos.inl +include/linbox/algorithms/block-massey-domain.h +include/linbox/algorithms/block-wiedemann.h +include/linbox/algorithms/charpoly-rational.h +include/linbox/algorithms/cia.h +include/linbox/algorithms/classic-rational-reconstruction.h +include/linbox/algorithms/coppersmith-invariant-factors.h +include/linbox/algorithms/coppersmith.h +include/linbox/algorithms/cra-builder-early-multip.h +include/linbox/algorithms/cra-builder-full-multip-fixed.h +include/linbox/algorithms/cra-builder-full-multip.h +include/linbox/algorithms/cra-builder-single.h +include/linbox/algorithms/cra-builder-var-prec-early-multip.h +include/linbox/algorithms/cra-builder-var-prec-early-single.h +include/linbox/algorithms/cra-distributed.h +include/linbox/algorithms/cra-domain-omp.h +include/linbox/algorithms/cra-domain-sequential.h +include/linbox/algorithms/cra-domain.h +include/linbox/algorithms/cra-givrnsfixed.h +include/linbox/algorithms/cra-kaapi.h +include/linbox/algorithms/default.h +include/linbox/algorithms/dense-container.h +include/linbox/algorithms/dense-nullspace.h +include/linbox/algorithms/dense-nullspace.inl +include/linbox/algorithms/det-rational.h +include/linbox/algorithms/diophantine-solver.h +include/linbox/algorithms/diophantine-solver.inl +include/linbox/algorithms/double-det.h +include/linbox/algorithms/dyadic-to-rational.h +include/linbox/algorithms/eliminator.h +include/linbox/algorithms/eliminator.inl +include/linbox/algorithms/fast-rational-reconstruction.h +include/linbox/algorithms/frobenius-large.h +include/linbox/algorithms/frobenius-small.h +include/linbox/algorithms/gauss-gf2.h +include/linbox/algorithms/gauss.h +include/linbox/algorithms/gauss/gauss-det-gf2.inl +include/linbox/algorithms/gauss/gauss-det.inl +include/linbox/algorithms/gauss/gauss-elim-gf2.inl +include/linbox/algorithms/gauss/gauss-elim.inl +include/linbox/algorithms/gauss/gauss-gf2.inl +include/linbox/algorithms/gauss/gauss-nullspace.inl +include/linbox/algorithms/gauss/gauss-pivot-gf2.inl +include/linbox/algorithms/gauss/gauss-pivot.inl +include/linbox/algorithms/gauss/gauss-rank-gf2.inl +include/linbox/algorithms/gauss/gauss-rank.inl +include/linbox/algorithms/gauss/gauss-solve-gf2.inl +include/linbox/algorithms/gauss/gauss-solve.inl +include/linbox/algorithms/gauss/gauss.inl +include/linbox/algorithms/hybrid-det.h +include/linbox/algorithms/invariant-factors.h +include/linbox/algorithms/invert-tb.h +include/linbox/algorithms/la-block-lanczos.h +include/linbox/algorithms/la-block-lanczos.inl +include/linbox/algorithms/lanczos.h +include/linbox/algorithms/lanczos.inl +include/linbox/algorithms/last-invariant-factor.h +include/linbox/algorithms/lattice.h +include/linbox/algorithms/lattice.inl +include/linbox/algorithms/lazy-product.h +include/linbox/algorithms/lifting-container.h +include/linbox/algorithms/massey-domain.h +include/linbox/algorithms/matpoly-mult.h +include/linbox/algorithms/matrix-blas3/mul-cra.inl +include/linbox/algorithms/matrix-blas3/mul-flint.inl +include/linbox/algorithms/matrix-blas3/mul-naive.inl +include/linbox/algorithms/matrix-blas3/mul-toomcook.inl +include/linbox/algorithms/matrix-blas3/mul.h +include/linbox/algorithms/matrix-hom.h +include/linbox/algorithms/matrix-inverse.h +include/linbox/algorithms/matrix-rank.h +include/linbox/algorithms/mg-block-lanczos.h +include/linbox/algorithms/mg-block-lanczos.inl +include/linbox/algorithms/minpoly-integer.h +include/linbox/algorithms/minpoly-rational.h +include/linbox/algorithms/numeric-solver-lapack.h +include/linbox/algorithms/one-invariant-factor.h +include/linbox/algorithms/opencl-environ.h +include/linbox/algorithms/opencl-resource-controller.h +include/linbox/algorithms/poly-det.h +include/linbox/algorithms/poly-dixon.h +include/linbox/algorithms/poly-interpolation.h +include/linbox/algorithms/poly-smith-form-local-x.h +include/linbox/algorithms/poly-smith-form.h +include/linbox/algorithms/polynomial-matrix/matpoly-add-domain.h +include/linbox/algorithms/polynomial-matrix/matpoly-mult-fft-multiprecision.inl +include/linbox/algorithms/polynomial-matrix/matpoly-mult-fft-recint.inl +include/linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize-fast.inl +include/linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize-three-primes.inl +include/linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl +include/linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h +include/linbox/algorithms/polynomial-matrix/matpoly-mult-kara.h +include/linbox/algorithms/polynomial-matrix/matpoly-mult-naive.h +include/linbox/algorithms/polynomial-matrix/order-basis.h +include/linbox/algorithms/polynomial-matrix/polynomial-fft-transform-simd.inl +include/linbox/algorithms/polynomial-matrix/polynomial-fft-transform.h +include/linbox/algorithms/polynomial-matrix/polynomial-fft-transform.inl +include/linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h +include/linbox/algorithms/polynomial-matrix/simd.h +include/linbox/algorithms/rational-cra-builder-early-multip.h +include/linbox/algorithms/rational-cra-builder-early-single.h +include/linbox/algorithms/rational-cra-builder-full-multip.h +include/linbox/algorithms/rational-cra-var-prec.h +include/linbox/algorithms/rational-cra.h +include/linbox/algorithms/rational-reconstruction-base.h +include/linbox/algorithms/rational-reconstruction.h +include/linbox/algorithms/rational-reconstruction2.h +include/linbox/algorithms/rational-solver-adaptive.h +include/linbox/algorithms/rational-solver-sn.h +include/linbox/algorithms/rational-solver-sn.inl +include/linbox/algorithms/rational-solver.h +include/linbox/algorithms/rational-solver.inl +include/linbox/algorithms/rational-solver2.h +include/linbox/algorithms/rns.h +include/linbox/algorithms/rns.inl +include/linbox/algorithms/short-vector.h +include/linbox/algorithms/sigma-basis.h +include/linbox/algorithms/signature.h +include/linbox/algorithms/smith-form-adaptive.h +include/linbox/algorithms/smith-form-adaptive.inl +include/linbox/algorithms/smith-form-binary.h +include/linbox/algorithms/smith-form-iliopoulos.h +include/linbox/algorithms/smith-form-kannan-bachem.h +include/linbox/algorithms/smith-form-local.h +include/linbox/algorithms/smith-form-local2.inl +include/linbox/algorithms/smith-form-sparseelim-local.h +include/linbox/algorithms/smith-form-sparseelim-poweroftwo.h +include/linbox/algorithms/smith-form-valence.h +include/linbox/algorithms/toeplitz-det.h +include/linbox/algorithms/triangular-solve-gf2.h +include/linbox/algorithms/triangular-solve.h +include/linbox/algorithms/vector-fraction.h +include/linbox/algorithms/weak-popov-form.h +include/linbox/algorithms/whisart_trace.h +include/linbox/algorithms/wiedemann.h +include/linbox/algorithms/wiedemann.inl +include/linbox/benchmark-metadata.C +include/linbox/benchmark-metadata.h +include/linbox/benchmark-utils.C +include/linbox/benchmark-utils.h +include/linbox/benchmark.C +include/linbox/benchmark.h +include/linbox/benchmark.inl +include/linbox/blackbox/apply.h +include/linbox/blackbox/archetype.h +include/linbox/blackbox/bb.h +include/linbox/blackbox/blackbox-interface.h +include/linbox/blackbox/blackbox.h +include/linbox/blackbox/block-compose.h +include/linbox/blackbox/block-hankel-inverse.h +include/linbox/blackbox/block-hankel.h +include/linbox/blackbox/block-toeplitz.h +include/linbox/blackbox/blockbb.h +include/linbox/blackbox/butterfly.h +include/linbox/blackbox/butterfly.inl +include/linbox/blackbox/companion.h +include/linbox/blackbox/compose.h +include/linbox/blackbox/csf.h +include/linbox/blackbox/csf.inl +include/linbox/blackbox/diagonal-gf2.h +include/linbox/blackbox/diagonal.h +include/linbox/blackbox/dif.h +include/linbox/blackbox/direct-sum.h +include/linbox/blackbox/factory.h +include/linbox/blackbox/fflas-csr.h +include/linbox/blackbox/fibb-product.h +include/linbox/blackbox/fibb.h +include/linbox/blackbox/frobenius.h +include/linbox/blackbox/hilbert.h +include/linbox/blackbox/inverse.h +include/linbox/blackbox/jit-matrix.h +include/linbox/blackbox/lambda-sparse.h +include/linbox/blackbox/matrix-blackbox.h +include/linbox/blackbox/moore-penrose.h +%%FULL%%include/linbox/blackbox/ntl-hankel.h +%%FULL%%include/linbox/blackbox/ntl-hankel.inl +%%FULL%%include/linbox/blackbox/ntl-sylvester.h +%%FULL%%include/linbox/blackbox/ntl-sylvester.inl +include/linbox/blackbox/null-matrix.h +include/linbox/blackbox/pascal.h +include/linbox/blackbox/permutation.h +include/linbox/blackbox/polynomial.h +include/linbox/blackbox/quad-matrix.h +include/linbox/blackbox/random-matrix-traits.h +include/linbox/blackbox/random-matrix.h +include/linbox/blackbox/rational-matrix-factory.h +include/linbox/blackbox/scalar-matrix.h +include/linbox/blackbox/scompose.h +include/linbox/blackbox/squarize.h +include/linbox/blackbox/submatrix-traits.h +include/linbox/blackbox/submatrix.h +include/linbox/blackbox/sum.h +include/linbox/blackbox/toeplitz.h +include/linbox/blackbox/toeplitz.inl +include/linbox/blackbox/transpose.h +include/linbox/blackbox/triangular-fibb.h +include/linbox/blackbox/zero-one.h +include/linbox/blackbox/zero-one.inl +include/linbox/blackbox/zo-gf2.h +include/linbox/blackbox/zo-gf2.inl +include/linbox/blackbox/zo.h +include/linbox/blackbox/zo.inl +include/linbox/blackbox/zoi.inl +include/linbox/config-blas.h +include/linbox/config.h +include/linbox/element/abstract.h +include/linbox/element/archetype.h +include/linbox/element/envelope.h +include/linbox/element/gmp-rational.h +include/linbox/field/abstract.h +include/linbox/field/archetype.h +include/linbox/field/envelope.h +include/linbox/field/field-documentation.h +include/linbox/field/field-traits.h +include/linbox/field/gf2.h +include/linbox/field/gf2.inl +include/linbox/field/gmp-rational.h +include/linbox/field/hom.h +include/linbox/field/map.h +include/linbox/field/multimod-field.h +include/linbox/field/param-fuzzy.h +include/linbox/field/rebind.h +include/linbox/integer.h +include/linbox/kaapi/communicate.h +include/linbox/linbox-config.h +include/linbox/linbox-tags.h +include/linbox/matrix/abnormal-helpers.h +include/linbox/matrix/abnormal-matrix.h +include/linbox/matrix/archetype.h +include/linbox/matrix/dense-matrix.h +include/linbox/matrix/densematrix/blas-matrix-multimod.h +include/linbox/matrix/densematrix/blas-matrix.h +include/linbox/matrix/densematrix/blas-matrix.inl +include/linbox/matrix/densematrix/blas-submatrix.inl +include/linbox/matrix/densematrix/blas-transposed-matrix.h +include/linbox/matrix/densematrix/blas-triangularmatrix.inl +include/linbox/matrix/factorized-matrix.h +include/linbox/matrix/factorized-matrix.inl +include/linbox/matrix/matrix-category.h +include/linbox/matrix/matrix-domain.h +include/linbox/matrix/matrix-traits.h +include/linbox/matrix/matrixdomain/apply-domain.h +include/linbox/matrix/matrixdomain/blas-matrix-domain.h +include/linbox/matrix/matrixdomain/blas-matrix-domain.inl +include/linbox/matrix/matrixdomain/matrix-domain-gf2.h +include/linbox/matrix/matrixdomain/matrix-domain.h +include/linbox/matrix/matrixdomain/matrix-domain.inl +include/linbox/matrix/matrixdomain/opencl-domain-factory.h +include/linbox/matrix/matrixdomain/opencl-domain-memory.inl +include/linbox/matrix/matrixdomain/opencl-domain-util.inl +include/linbox/matrix/matrixdomain/opencl-domain.h +include/linbox/matrix/matrixdomain/opencl-domain.inl +include/linbox/matrix/matrixdomain/plain-domain.h +include/linbox/matrix/permutation-matrix.h +include/linbox/matrix/permutation-matrix.inl +include/linbox/matrix/plain-matrix.h +include/linbox/matrix/polynomial-matrix.h +include/linbox/matrix/random-matrix.h +include/linbox/matrix/random-matrix.inl +include/linbox/matrix/sliced3.h +include/linbox/matrix/sliced3/dense-matrix.h +include/linbox/matrix/sliced3/dense-sliced.h +include/linbox/matrix/sliced3/dense-sliced.inl +include/linbox/matrix/sliced3/sliced-domain.h +include/linbox/matrix/sliced3/sliced-stepper.h +include/linbox/matrix/sliced3/submat-iterator.h +include/linbox/matrix/sparse-formats.h +include/linbox/matrix/sparse-matrix.h +include/linbox/matrix/sparsematrix/read-write-sparse.h +include/linbox/matrix/sparsematrix/read-write-sparse.inl +include/linbox/matrix/sparsematrix/sparse-associative-vector.h +include/linbox/matrix/sparsematrix/sparse-associative-vector.inl +include/linbox/matrix/sparsematrix/sparse-coo-implicit-matrix.h +include/linbox/matrix/sparsematrix/sparse-coo-matrix.h +include/linbox/matrix/sparsematrix/sparse-csr-matrix.h +include/linbox/matrix/sparsematrix/sparse-domain.h +include/linbox/matrix/sparsematrix/sparse-ell-matrix.h +include/linbox/matrix/sparsematrix/sparse-ellr-matrix.h +include/linbox/matrix/sparsematrix/sparse-generic.h +include/linbox/matrix/sparsematrix/sparse-generic.inl +include/linbox/matrix/sparsematrix/sparse-hyb-matrix.h +include/linbox/matrix/sparsematrix/sparse-map-map-matrix.h +include/linbox/matrix/sparsematrix/sparse-map-map-matrix.inl +include/linbox/matrix/sparsematrix/sparse-parallel-vector.h +include/linbox/matrix/sparsematrix/sparse-parallel-vector.inl +include/linbox/matrix/sparsematrix/sparse-sequence-vector.h +include/linbox/matrix/sparsematrix/sparse-sequence-vector.inl +include/linbox/matrix/sparsematrix/sparse-tpl-matrix-omp.h +include/linbox/matrix/sparsematrix/sparse-tpl-matrix-omp.inl +include/linbox/matrix/sparsematrix/sparse-tpl-matrix.h +include/linbox/matrix/sparsematrix/sparse-tpl-matrix.inl +include/linbox/matrix/sparsematrix/triples-coord.h +include/linbox/matrix/transpose-matrix.h +include/linbox/optimizer.h +include/linbox/polynomial/dense-polynomial.h +include/linbox/randiter/abstract.h +include/linbox/randiter/archetype.h +include/linbox/randiter/envelope.h +include/linbox/randiter/gf2.h +include/linbox/randiter/gmp-random-prime.h +include/linbox/randiter/gmp-rational.h +include/linbox/randiter/mersenne-twister.h +include/linbox/randiter/modular-balanced.h +include/linbox/randiter/modular-crooked.h +include/linbox/randiter/multimod-randomprime.h +%%FULL%%include/linbox/randiter/ntl-zz.h +include/linbox/randiter/param-fuzzy.h +include/linbox/randiter/random-fftprime.h +include/linbox/randiter/random-prime.h +include/linbox/ring/abstract.h +include/linbox/ring/archetype.h +include/linbox/ring/envelope.h +include/linbox/ring/local-pir-modular.h +include/linbox/ring/local2_32.h +include/linbox/ring/modular.h +include/linbox/ring/modular/modular-balanced-double.h +include/linbox/ring/modular/modular-balanced-float.h +include/linbox/ring/modular/modular-balanced-int32.h +include/linbox/ring/modular/modular-balanced-int64.h +include/linbox/ring/modular/modular-byte.h 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