Date: Sat, 28 Sep 2019 10:52:57 +0000 (UTC) From: Niclas Zeising <zeising@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r513114 - head/biology/ncbi-toolkit Message-ID: <201909281052.x8SAqvOw007901@repo.freebsd.org>
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Author: zeising Date: Sat Sep 28 10:52:57 2019 New Revision: 513114 URL: https://svnweb.freebsd.org/changeset/ports/513114 Log: biologi/ncbi-toolkit: Remove dependency on libXp Remove the dependency on libXp from ncbi-toolkit, since libXp is deprecated and it isn't needed. Remove deprecation from ncbi-toolkit. Modified: head/biology/ncbi-toolkit/Makefile Modified: head/biology/ncbi-toolkit/Makefile ============================================================================== --- head/biology/ncbi-toolkit/Makefile Sat Sep 28 10:48:06 2019 (r513113) +++ head/biology/ncbi-toolkit/Makefile Sat Sep 28 10:52:57 2019 (r513114) @@ -3,7 +3,7 @@ PORTNAME= ncbi-toolkit DISTVERSION= 2017.01.06 # containing BLAST v2.2.27 (? is this true) -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= biology MASTER_SITES= ftp://ftp.ncbi.nlm.nih.gov/toolbox/ncbi_tools/old/${PORTVERSION:S/.//g}/ DISTNAME= ncbi @@ -12,8 +12,6 @@ DIST_SUBDIR= ${PORTNAME}-${PORTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= NCBI development toolkit, including BLAST 2 and GenBank/Entrez support -DEPRECATED= Depends on deprecated libXp - LIB_DEPENDS= libfontconfig.so:x11-fonts/fontconfig \ libgmp.so:math/gmp \ libgnutls.so:security/gnutls \ @@ -24,8 +22,7 @@ LIB_DEPENDS= libfontconfig.so:x11-fonts/fontconfig \ libpng.so:graphics/png \ libtasn1.so:security/libtasn1 \ libtspi.so:security/trousers \ - libunistring.so:devel/libunistring \ - libXp.so:x11/libXp + libunistring.so:devel/libunistring USES= gettext-runtime iconv jpeg motif xorg USE_XORG= x11 xau xext xft xmu xrender xt @@ -41,6 +38,8 @@ post-patch: '/^NCBI_CC/s|=.*|= ${CC}| ; \ /^NCBI_LDFLGS1/s|=.*|= ${LDFLAGS}| ; \ /^NCBI_OPTFLAG/s|= .*|= ${CFLAGS}| ; \ + /^NCBI_VIBLIBS/s|-lXp\ || ; \ + /^NCBI_DISTVIBLIBS/s|-lXp\ || ; \ s|-I/usr/X11R6/include||g ; \ s|-L/usr/X11R6/lib||g ; \ s|/usr/local|${LOCALBASE}|g ; \
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