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Wed, 1 Jan 2025 10:59:31 GMT (envelope-from git) Date: Wed, 1 Jan 2025 10:59:31 GMT Message-Id: <202501011059.501AxVrs016720@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Rene Ladan Subject: git: dd41e117edf6 - main - science/py-nilearn: Remove expired port List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-all@freebsd.org Sender: owner-dev-commits-ports-all@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: rene X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: dd41e117edf69a86b861eaedcd016835c6d7e8d1 Auto-Submitted: auto-generated The branch main has been updated by rene: URL: https://cgit.FreeBSD.org/ports/commit/?id=dd41e117edf69a86b861eaedcd016835c6d7e8d1 commit dd41e117edf69a86b861eaedcd016835c6d7e8d1 Author: Rene Ladan AuthorDate: 2025-01-01 10:59:24 +0000 Commit: Rene Ladan CommitDate: 2025-01-01 10:59:24 +0000 science/py-nilearn: Remove expired port 2024-12-31 science/py-nilearn: Depends on expired devel/py-codecov --- MOVED | 1 + science/Makefile | 1 - science/py-nilearn/Makefile | 45 -------------------------------------------- science/py-nilearn/distinfo | 3 --- science/py-nilearn/pkg-descr | 10 ---------- 5 files changed, 1 insertion(+), 59 deletions(-) diff --git a/MOVED b/MOVED index b3f4f1a83b12..d6a993e3bd05 100644 --- a/MOVED +++ b/MOVED @@ -3810,3 +3810,4 @@ net-mgmt/zabbix64-frontend||2025-01-01|Has expired: Zabbix 6.4 is expected to re net-mgmt/zabbix64-server||2025-01-01|Has expired: Zabbix 6.4 is expected to reach EoL on December 31, 2024 www/webtrees20|www/webtrees21|2025-01-01|Has expired: Uses obsolete PHP version; use www/webtrees21 or www/webtrees22 instead dns/py-idna_ssl||2025-01-01|Has expired: Upstream repository has been archived on Oct 22, 2020 +science/py-nilearn||2025-01-01|Has expired: Depends on expired devel/py-codecov diff --git a/science/Makefile b/science/Makefile index 36e82d0f138c..df34c6dbc9e0 100644 --- a/science/Makefile +++ b/science/Makefile @@ -380,7 +380,6 @@ SUBDIR += py-netcdf-flattener SUBDIR += py-nglview SUBDIR += py-nibabel - SUBDIR += py-nilearn SUBDIR += py-obspy SUBDIR += py-oddt SUBDIR += py-openEMS diff --git a/science/py-nilearn/Makefile b/science/py-nilearn/Makefile deleted file mode 100644 index 008f15971e7b..000000000000 --- a/science/py-nilearn/Makefile +++ /dev/null @@ -1,45 +0,0 @@ -PORTNAME= nilearn -DISTVERSION= 0.11.1 -CATEGORIES= science python -MASTER_SITES= PYPI -PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} - -MAINTAINER= yuri@FreeBSD.org -COMMENT= Statistical learning for neuroimaging in Python -WWW= https://nilearn.github.io/ - -LICENSE= BSD3CLAUSE -LICENSE_FILE= ${WRKSRC}/LICENSE - -DEPRECATED= Depends on expired devel/py-codecov -EXPIRATION_DATE=2024-12-31 - -BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}hatch-vcs>0:devel/py-hatch-vcs@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}hatchling>0:devel/py-hatchling@${PY_FLAVOR} -RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}codecov>0:devel/py-codecov@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}joblib>=1.2.0:devel/py-joblib@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}lxml>0:devel/py-lxml@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}nibabel>=5.2.0:science/py-nibabel@${PY_FLAVOR} \ - ${PYNUMPY} \ - ${PYTHON_PKGNAMEPREFIX}packaging>0:devel/py-packaging@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}requests>=2.25.0:www/py-requests@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}scikit-learn>=1.4.0:science/py-scikit-learn@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}scipy>=1.8.0:science/py-scipy@${PY_FLAVOR} \ - bash:shells/bash -TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}pytest-cov>=0:devel/py-pytest-cov@${PY_FLAVOR} - -USES= python shebangfix -USE_PYTHON= pep517 autoplist - -SHEBANG_FILES= nilearn/datasets/tests/data/list_archive_contents.sh \ - nilearn/plotting/glass_brain_files/plot_align_svg.py - -NO_ARCH= yes - -do-test: - @cd ${WRKSRC} && ${PYTHON_CMD} -m pytest -rs -v - -.include diff --git a/science/py-nilearn/distinfo b/science/py-nilearn/distinfo deleted file mode 100644 index 8f13c7435820..000000000000 --- a/science/py-nilearn/distinfo +++ /dev/null @@ -1,3 +0,0 @@ -TIMESTAMP = 1735072241 -SHA256 (nilearn-0.11.1.tar.gz) = a01df08fc6c8ded3cd6fb7a211634603ad46a6df780504b6d05222c2e7a972fe -SIZE (nilearn-0.11.1.tar.gz) = 12481586 diff --git a/science/py-nilearn/pkg-descr b/science/py-nilearn/pkg-descr deleted file mode 100644 index 5e85ecdb88ba..000000000000 --- a/science/py-nilearn/pkg-descr +++ /dev/null @@ -1,10 +0,0 @@ -Nilearn enables approachable and versatile analyses of brain volumes. It -provides statistical and machine-learning tools, with instructive documentation -& open community. - -It supports general linear model (GLM) based analysis and leverages the -scikit-learn Python toolbox for multivariate statistics with applications such -as predictive modelling, classification, decoding, or connectivity analysis. - -Nilearn now includes the functionality of Nistats. Here's a guide to replacing -Nistats imports to work in Nilearn.