From owner-freebsd-ports-bugs@FreeBSD.ORG Sun May 17 11:30:01 2009 Return-Path: Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id E08DB1065676 for ; Sun, 17 May 2009 11:30:01 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id BA3498FC22 for ; Sun, 17 May 2009 11:30:01 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (gnats@localhost [127.0.0.1]) by freefall.freebsd.org (8.14.3/8.14.3) with ESMTP id n4HBU1Lv015402 for ; Sun, 17 May 2009 11:30:01 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.3/8.14.3/Submit) id n4HBU1IW015399; Sun, 17 May 2009 11:30:01 GMT (envelope-from gnats) Resent-Date: Sun, 17 May 2009 11:30:01 GMT Resent-Message-Id: <200905171130.n4HBU1IW015399@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Wen Heping Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id EAB20106564A for ; Sun, 17 May 2009 11:26:38 +0000 (UTC) (envelope-from nobody@FreeBSD.org) Received: from www.freebsd.org (www.freebsd.org [IPv6:2001:4f8:fff6::21]) by mx1.freebsd.org (Postfix) with ESMTP id CEBFA8FC1C for ; Sun, 17 May 2009 11:26:38 +0000 (UTC) (envelope-from nobody@FreeBSD.org) Received: from www.freebsd.org (localhost [127.0.0.1]) by www.freebsd.org (8.14.3/8.14.3) with ESMTP id n4HBQcSB021529 for ; Sun, 17 May 2009 11:26:38 GMT (envelope-from nobody@www.freebsd.org) Received: (from nobody@localhost) by www.freebsd.org (8.14.3/8.14.3/Submit) id n4HBQcrd021502; Sun, 17 May 2009 11:26:38 GMT (envelope-from nobody) Message-Id: <200905171126.n4HBQcrd021502@www.freebsd.org> Date: Sun, 17 May 2009 11:26:38 GMT From: Wen Heping To: freebsd-gnats-submit@FreeBSD.org X-Send-Pr-Version: www-3.1 Cc: Subject: ports/134612: [NEW PORT]science/p5-Chemistry-File-PDB:Perl module to read and write PDB files X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 17 May 2009 11:30:02 -0000 >Number: 134612 >Category: ports >Synopsis: [NEW PORT]science/p5-Chemistry-File-PDB:Perl module to read and write PDB files >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Sun May 17 11:30:01 UTC 2009 >Closed-Date: >Last-Modified: >Originator: Wen Heping >Release: FreeBSD 8.0-CURRENT >Organization: ChangAn Middle School >Environment: FreeBSD fb8.wenjing.com 8.0-CURRENT FreeBSD 8.0-CURRENT #0: Sun Mar 22 22:12:06 CST 2009 root@fb8.wenjing.com:/usr/obj/usr/src/sys/GENERIC i386 >Description: p5-Chemistry-File-PDB reads and writes PDB files. The PDB file format is commonly used to describe proteins, particularly those stored in the Protein Data Bank(). WWW: http://search.cpan.org/dist/Chemistry-File-PDB/ >How-To-Repeat: >Fix: Patch attached with submission follows: # This is a shell archive. Save it in a file, remove anything before # this line, and then unpack it by entering "sh file". Note, it may # create directories; files and directories will be owned by you and # have default permissions. # # This archive contains: # # p5-Chemistry-File-PDB # p5-Chemistry-File-PDB/Makefile # p5-Chemistry-File-PDB/distinfo # p5-Chemistry-File-PDB/pkg-descr # p5-Chemistry-File-PDB/pkg-plist # echo c - p5-Chemistry-File-PDB mkdir -p p5-Chemistry-File-PDB > /dev/null 2>&1 echo x - p5-Chemistry-File-PDB/Makefile sed 's/^X//' >p5-Chemistry-File-PDB/Makefile << 'bf5197f79ca19483cedfcbc0a77951cd' X# New ports collection makefile for: Chemistry-File-PDB X# Date created: 17 May, 2009 X# Whom: Wen Heping X# X# $FreeBSD$ X# X XPORTNAME= Chemistry-File-PDB XPORTVERSION= 0.23 XCATEGORIES= science perl5 XMASTER_SITES= CPAN XPKGNAMEPREFIX= p5- X XMAINTAINER= wenheping@gmail.com XCOMMENT= Perl module to read and write PDB files X XBUILD_DEPENDS= p5-Chemistry-Mol>=0.37:${PORTSDIR}/science/p5-Chemistry-Mol \ X p5-Chemistry-MacroMol>=0.06:${PORTSDIR}/science/p5-Chemistry-MacroMol XRUN_DEPENDS= ${BUILD_DEPENDS} X XPERL_CONFIGURE= yes X XMAN3= Chemistry::File::PDB.3 X X.include bf5197f79ca19483cedfcbc0a77951cd echo x - p5-Chemistry-File-PDB/distinfo sed 's/^X//' >p5-Chemistry-File-PDB/distinfo << '8dafc88a3d9eacaa1f2b62b662142667' XMD5 (Chemistry-File-PDB-0.23.tar.gz) = 143d09cf59d0fe3e1990c59cf47d2b8c XSHA256 (Chemistry-File-PDB-0.23.tar.gz) = 0e4cfbd1b5af7c961e1fb1816edff510a56e9f38b904ee2513931db849558c71 XSIZE (Chemistry-File-PDB-0.23.tar.gz) = 7591 8dafc88a3d9eacaa1f2b62b662142667 echo x - p5-Chemistry-File-PDB/pkg-descr sed 's/^X//' >p5-Chemistry-File-PDB/pkg-descr << '2ef4cdadd10699e21899055baf12424c' Xp5-Chemistry-File-PDB reads and writes PDB files. The PDB file format Xis commonly used to describe proteins, particularly those stored in the XProtein Data Bank(). X XWWW: http://search.cpan.org/dist/Chemistry-File-PDB/ 2ef4cdadd10699e21899055baf12424c echo x - p5-Chemistry-File-PDB/pkg-plist sed 's/^X//' >p5-Chemistry-File-PDB/pkg-plist << '920d2361bd3628157b5fb0b1e4b02e88' X%%SITE_PERL%%/Chemistry/File/PDB.pm X%%SITE_PERL%%/%%PERL_ARCH%%/auto/Chemistry/File/PDB/.packlist X@dirrm %%SITE_PERL%%/%%PERL_ARCH%%/auto/Chemistry/File/PDB X@dirrm %%SITE_PERL%%/%%PERL_ARCH%%/auto/Chemistry/File X@dirrmtry %%SITE_PERL%%/%%PERL_ARCH%%/auto/Chemistry X@dirrmtry %%SITE_PERL%%/Chemistry/File X@dirrmtry %%SITE_PERL%%/Chemistry 920d2361bd3628157b5fb0b1e4b02e88 exit >Release-Note: >Audit-Trail: >Unformatted: