From owner-svn-ports-all@FreeBSD.ORG Wed Feb 5 23:44:51 2014 Return-Path: Delivered-To: svn-ports-all@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 3860A914; Wed, 5 Feb 2014 23:44:51 +0000 (UTC) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id 227EC185C; Wed, 5 Feb 2014 23:44:51 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.8/8.14.8) with ESMTP id s15Nip54009461; Wed, 5 Feb 2014 23:44:51 GMT (envelope-from marino@svn.freebsd.org) Received: (from marino@localhost) by svn.freebsd.org (8.14.8/8.14.8/Submit) id s15Nio9e009460; Wed, 5 Feb 2014 23:44:50 GMT (envelope-from marino@svn.freebsd.org) Message-Id: <201402052344.s15Nio9e009460@svn.freebsd.org> From: John Marino Date: Wed, 5 Feb 2014 23:44:50 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r342905 - head/biology/tRNAscan-SE/files X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.17 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 05 Feb 2014 23:44:51 -0000 Author: marino Date: Wed Feb 5 23:44:50 2014 New Revision: 342905 URL: http://svnweb.freebsd.org/changeset/ports/342905 QAT: https://qat.redports.org/buildarchive/r342905/ Log: biology/tRNAscan-SE: Fix hardcoded perl path Added: head/biology/tRNAscan-SE/files/ head/biology/tRNAscan-SE/files/patch-Makefile (contents, props changed) Added: head/biology/tRNAscan-SE/files/patch-Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/tRNAscan-SE/files/patch-Makefile Wed Feb 5 23:44:50 2014 (r342905) @@ -0,0 +1,11 @@ +--- Makefile.orig 2013-03-17 11:38:57.213776000 +0000 ++++ Makefile +@@ -13,7 +13,7 @@ RFLAGS = -DRELEASE=$(COV_RELEASE) -D + ## greatly speeding scans of unfinished sequence + + ## where Perl v.5 (or greater) is installed +-PERLDIR = /usr/bin ++PERLDIR = $(PREFIX)/bin + + ## what you call the Perl v.5 executable on your system + ## (this could be 'perl5' or otherwise on some systems)