From owner-svn-ports-head@freebsd.org Sat Oct 20 23:29:32 2018 Return-Path: Delivered-To: svn-ports-head@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id C0513FFA583; Sat, 20 Oct 2018 23:29:31 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 628C48FEF1; Sat, 20 Oct 2018 23:29:31 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 57EF524EBC; Sat, 20 Oct 2018 23:29:31 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id w9KNTVs3098674; Sat, 20 Oct 2018 23:29:31 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id w9KNTSth098659; Sat, 20 Oct 2018 23:29:28 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <201810202329.w9KNTSth098659@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Sat, 20 Oct 2018 23:29:28 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r482633 - in head/science: atom bagel jdftx libgridxc libxc libxc/files madness octopus py-gpaw X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: in head/science: atom bagel jdftx libgridxc libxc libxc/files madness octopus py-gpaw X-SVN-Commit-Revision: 482633 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 20 Oct 2018 23:29:32 -0000 Author: yuri Date: Sat Oct 20 23:29:28 2018 New Revision: 482633 URL: https://svnweb.freebsd.org/changeset/ports/482633 Log: science/libxc: Update 3.0.0 -> 4.2.3 PR: 231648 Approved by: dieterich@ogolem.org (maintainer's timeout; 27 days) Added: head/science/libxc/files/ head/science/libxc/files/patch-src_xc.h (contents, props changed) Modified: head/science/atom/Makefile head/science/bagel/Makefile head/science/jdftx/Makefile head/science/libgridxc/Makefile head/science/libxc/Makefile head/science/libxc/distinfo head/science/libxc/pkg-descr head/science/libxc/pkg-plist head/science/madness/Makefile head/science/octopus/Makefile head/science/py-gpaw/Makefile Modified: head/science/atom/Makefile ============================================================================== --- head/science/atom/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/atom/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -2,7 +2,7 @@ PORTNAME= atom DISTVERSION= 4.2.7-100 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science MASTER_SITES= https://departments.icmab.es/leem/siesta/Pseudopotentials/Code/ \ https://departments.icmab.es/leem/siesta/Pseudopotentials/:lic @@ -17,7 +17,7 @@ COMMENT= Program for DFT calculations in atoms LICENSE= ATOM_LICENSE LICENSE_NAME= ATOM ACADEMIC LICENCE LICENSE_FILE= ${DISTDIR}/${DIST_SUBDIR}/atom_licence.html -LICENSE_PERMS= no-dist-mirror no-pkg-mirror no-pkg-sell no-auto-accept +LICENSE_PERMS= # none LIB_DEPENDS= libGridXC.so:science/libgridxc \ libxc.so:science/libxc \ Modified: head/science/bagel/Makefile ============================================================================== --- head/science/bagel/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/bagel/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -4,6 +4,7 @@ PORTNAME= bagel DISTVERSIONPREFIX= v DISTVERSION= 1.1.2-21 DISTVERSIONSUFFIX= -g2a9472a50 +PORTREVISION= 1 CATEGORIES= science MAINTAINER= yuri@FreeBSD.org Modified: head/science/jdftx/Makefile ============================================================================== --- head/science/jdftx/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/jdftx/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -3,7 +3,7 @@ PORTNAME= jdftx DISTVERSIONPREFIX= v DISTVERSION= 1.4.2-74 -PORTREVISION= 1 +PORTREVISION= 2 DISTVERSIONSUFFIX= -gba743849 CATEGORIES= science Modified: head/science/libgridxc/Makefile ============================================================================== --- head/science/libgridxc/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/libgridxc/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -2,7 +2,7 @@ PORTNAME= libgridxc DISTVERSION= 0.8.0 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science MASTER_SITES= https://launchpad.net/${PORTNAME}/trunk/${DISTVERSION:R}/+download/ Modified: head/science/libxc/Makefile ============================================================================== --- head/science/libxc/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/libxc/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -2,10 +2,9 @@ # $FreeBSD$ PORTNAME= libxc -PORTVERSION= 3.0.0 -PORTREVISION= 5 +DISTVERSION= 4.2.3 CATEGORIES= science -MASTER_SITES= http://www.tddft.org/programs/octopus/download/libxc/ +MASTER_SITES= http://www.tddft.org/programs/octopus/download/libxc/${DISTVERSION}/ MAINTAINER= dieterich@ogolem.org COMMENT= Library of exchange-correlation functionals for DFT @@ -15,13 +14,9 @@ LICENSE_FILE= ${WRKSRC}/COPYING USES= fortran gmake libtool perl5 GNU_CONFIGURE= yes -CONFIGURE_ARGS= --enable-shared +CONFIGURE_ARGS= --enable-shared --disable-static USE_LDCONFIG= yes INSTALL_TARGET= install-strip - -post-patch: - @${REINPLACE_CMD} -e '/^pkgconfigdir =/s,libdir),prefix)/libdata,' \ - ${WRKSRC}/build/Makefile.in .include Modified: head/science/libxc/distinfo ============================================================================== --- head/science/libxc/distinfo Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/libxc/distinfo Sat Oct 20 23:29:28 2018 (r482633) @@ -1,2 +1,3 @@ -SHA256 (libxc-3.0.0.tar.gz) = 5542b99042c09b2925f2e3700d769cda4fb411b476d446c833ea28c6bfa8792a -SIZE (libxc-3.0.0.tar.gz) = 8388775 +TIMESTAMP = 1540063598 +SHA256 (libxc-4.2.3.tar.gz) = 02e49e9ba7d21d18df17e9e57eae861e6ce05e65e966e1e832475aa09e344256 +SIZE (libxc-4.2.3.tar.gz) = 15601356 Added: head/science/libxc/files/patch-src_xc.h ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/libxc/files/patch-src_xc.h Sat Oct 20 23:29:28 2018 (r482633) @@ -0,0 +1,11 @@ +--- src/xc.h.orig 2018-10-20 19:30:09 UTC ++++ src/xc.h +@@ -14,7 +14,7 @@ extern "C" { + #endif + + #ifdef HAVE_CONFIG_H +-#include "config.h" ++//#include "config.h" // "config.h" should never be included by the installed package: https://gitlab.com/libxc/libxc/issues/66 + #endif + + #include Modified: head/science/libxc/pkg-descr ============================================================================== --- head/science/libxc/pkg-descr Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/libxc/pkg-descr Sat Oct 20 23:29:28 2018 (r482633) @@ -1,9 +1,9 @@ Libxc is library of exchange-correlation functionals for density-functional -theory. The aim is to provide a portable, well tested and reliable set of +theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals that can be used by all the ETSF codes and also other codes. In libxc you can find different types of functionals: LDA, GGA, hybrids, and mGGA (experimental). -WWW: http://www.tddft.org/programs/octopus/wiki/index.php/Libxc +WWW: http://www.tddft.org/programs/libxc/ Modified: head/science/libxc/pkg-plist ============================================================================== --- head/science/libxc/pkg-plist Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/libxc/pkg-plist Sat Oct 20 23:29:28 2018 (r482633) @@ -1,23 +1,22 @@ bin/xc-info +bin/xc-threshold include/libxc_funcs_m.mod include/xc.h -include/xc_config.h include/xc_f03_lib_m.mod include/xc_f90_lib_m.mod include/xc_f90_types_m.mod include/xc_funcs.h -include/xc_unconfig.h +include/xc_funcs_removed.h include/xc_version.h -lib/libxc.a lib/libxc.so -lib/libxc.so.4 -lib/libxc.so.4.0.0 -lib/libxcf03.a +lib/libxc.so.5 +lib/libxc.so.5.2.3 lib/libxcf03.so -lib/libxcf03.so.4 -lib/libxcf03.so.4.0.0 -lib/libxcf90.a +lib/libxcf03.so.5 +lib/libxcf03.so.5.2.3 lib/libxcf90.so -lib/libxcf90.so.4 -lib/libxcf90.so.4.0.0 +lib/libxcf90.so.5 +lib/libxcf90.so.5.2.3 libdata/pkgconfig/libxc.pc +libdata/pkgconfig/libxcf03.pc +libdata/pkgconfig/libxcf90.pc Modified: head/science/madness/Makefile ============================================================================== --- head/science/madness/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/madness/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -2,7 +2,7 @@ PORTNAME= madness DISTVERSION= 0.10.1.20180823 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= science MAINTAINER= yuri@FreeBSD.org Modified: head/science/octopus/Makefile ============================================================================== --- head/science/octopus/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/octopus/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -2,7 +2,7 @@ PORTNAME= octopus DISTVERSION= 8.2 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science MASTER_SITES= http://www.tddft.org/programs/${PORTNAME}/download/${DISTVERSION}/ Modified: head/science/py-gpaw/Makefile ============================================================================== --- head/science/py-gpaw/Makefile Sat Oct 20 23:15:15 2018 (r482632) +++ head/science/py-gpaw/Makefile Sat Oct 20 23:29:28 2018 (r482633) @@ -2,7 +2,7 @@ PORTNAME= gpaw DISTVERSION= 1.4.0 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}