From owner-svn-ports-head@FreeBSD.ORG Fri May 2 14:00:13 2014 Return-Path: Delivered-To: svn-ports-head@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id CCE00CE7; Fri, 2 May 2014 14:00:13 +0000 (UTC) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id BA66A1A6E; Fri, 2 May 2014 14:00:13 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.8/8.14.8) with ESMTP id s42E0DGS071601; Fri, 2 May 2014 14:00:13 GMT (envelope-from wen@svn.freebsd.org) Received: (from wen@localhost) by svn.freebsd.org (8.14.8/8.14.8/Submit) id s42E0Df3071595; Fri, 2 May 2014 14:00:13 GMT (envelope-from wen@svn.freebsd.org) Message-Id: <201405021400.s42E0Df3071595@svn.freebsd.org> From: Wen Heping Date: Fri, 2 May 2014 14:00:13 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r352814 - head/biology/pycogent X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.17 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 14:00:13 -0000 Author: wen Date: Fri May 2 14:00:13 2014 New Revision: 352814 URL: http://svnweb.freebsd.org/changeset/ports/352814 QAT: https://qat.redports.org/buildarchive/r352814/ Log: - Stage support [1] - Pet portlint [1] - Add LICENSE - Convert to PYDISTUTILS_AUTOPLIST PR: 188819 [1] Submitted by: Bartek Rutkowski [1] Deleted: head/biology/pycogent/pkg-plist Modified: head/biology/pycogent/Makefile head/biology/pycogent/pkg-descr Modified: head/biology/pycogent/Makefile ============================================================================== --- head/biology/pycogent/Makefile Fri May 2 13:17:26 2014 (r352813) +++ head/biology/pycogent/Makefile Fri May 2 14:00:13 2014 (r352814) @@ -10,7 +10,9 @@ DISTNAME= PyCogent-${PORTVERSION} EXTRACT_SUFX= .tgz MAINTAINER= wen@FreeBSD.org -COMMENT= A toolkit for statistical analysis of biological sequences +COMMENT= Toolkit for statistical analysis of biological sequences + +LICENSE= GPLv2 BUILD_DEPENDS= ${PYNUMPY} \ ${LOCALBASE}/bin/cython:${PORTSDIR}/lang/cython \ @@ -21,6 +23,6 @@ RUN_DEPENDS:= ${BUILD_DEPENDS} USE_PYTHON= yes USE_PYDISTUTILS= yes PYDISTUTILS_PKGNAME= cogent +PYDISTUTILS_AUTOPLIST= yes -NO_STAGE= yes .include Modified: head/biology/pycogent/pkg-descr ============================================================================== --- head/biology/pycogent/pkg-descr Fri May 2 13:17:26 2014 (r352813) +++ head/biology/pycogent/pkg-descr Fri May 2 14:00:13 2014 (r352814) @@ -6,4 +6,4 @@ graphics. It is distinguished by many un true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data. -WWW: http://pycogent.sourceforge.net/ +WWW: http://pycogent.sourceforge.net/