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Fri, 22 Mar 2024 07:30:18 GMT (envelope-from git) Date: Fri, 22 Mar 2024 07:30:18 GMT Message-Id: <202403220730.42M7UItF084820@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yasuhiro Kimura Subject: git: eb44cf3c6f26 - main - biology/minimap2: Move man page to share/man List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yasu X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: eb44cf3c6f2638afa81b13177c442ae96f58f236 Auto-Submitted: auto-generated The branch main has been updated by yasu: URL: https://cgit.FreeBSD.org/ports/commit/?id=eb44cf3c6f2638afa81b13177c442ae96f58f236 commit eb44cf3c6f2638afa81b13177c442ae96f58f236 Author: Yasuhiro Kimura AuthorDate: 2024-03-22 07:25:44 +0000 Commit: Yasuhiro Kimura CommitDate: 2024-03-22 07:29:47 +0000 biology/minimap2: Move man page to share/man Approved by: portmgr (blanket) --- biology/minimap2/Makefile | 1 + biology/minimap2/files/patch-Makefile.simde | 6 +++--- biology/minimap2/pkg-plist | 2 +- 3 files changed, 5 insertions(+), 4 deletions(-) diff --git a/biology/minimap2/Makefile b/biology/minimap2/Makefile index d403413cc324..df9552ac6ca0 100644 --- a/biology/minimap2/Makefile +++ b/biology/minimap2/Makefile @@ -1,6 +1,7 @@ PORTNAME= minimap2 DISTVERSIONPREFIX= v DISTVERSION= 2.27 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/minimap2/files/patch-Makefile.simde b/biology/minimap2/files/patch-Makefile.simde index 5d5e0ccf482c..aac7981c6b10 100644 --- a/biology/minimap2/files/patch-Makefile.simde +++ b/biology/minimap2/files/patch-Makefile.simde @@ -1,4 +1,4 @@ ---- Makefile.simde.orig 2021-11-18 22:11:48 UTC +--- Makefile.simde.orig 2024-03-12 17:20:07 UTC +++ Makefile.simde @@ -1,13 +1,26 @@ -CFLAGS= -g -Wall -O2 -Wc++-compat #-Wextra @@ -21,7 +21,7 @@ LIBS= -lm -lz -lpthread +PREFIX?= /usr/local -+MAN1DIR?= ${PREFIX}/man/man1 ++MAN1DIR?= ${PREFIX}/share/man/man1 +DATADIR?= ${PREFIX}/share/minimap2 +MKDIR?= mkdir @@ -32,7 +32,7 @@ ifneq ($(arm_neon),) # if arm_neon is defined ifeq ($(aarch64),) #if aarch64 is not defined CFLAGS+=-D_FILE_OFFSET_BITS=64 -mfpu=neon -fsigned-char -@@ -26,7 +39,7 @@ ifneq ($(tsan),) +@@ -26,7 +39,7 @@ endif LIBS+=-fsanitize=thread endif diff --git a/biology/minimap2/pkg-plist b/biology/minimap2/pkg-plist index 1d11d4c99c2f..742d1eb1b3f7 100644 --- a/biology/minimap2/pkg-plist +++ b/biology/minimap2/pkg-plist @@ -1,7 +1,7 @@ bin/minimap2 bin/minimap2-lite bin/sdust -man/man1/minimap2.1.gz +share/man/man1/minimap2.1.gz %%DATADIR%%/test/MT-human.fa %%DATADIR%%/test/MT-orang.fa %%DATADIR%%/test/q-inv.fa