Date: Wed, 17 Jun 2020 10:05:11 +0000 (UTC) From: Thierry Thomas <thierry@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r539413 - in head/math/sage: . files Message-ID: <202006171005.05HA5BX2059344@repo.freebsd.org>
next in thread | raw e-mail | index | archive | help
Author: thierry Date: Wed Jun 17 10:05:10 2020 New Revision: 539413 URL: https://svnweb.freebsd.org/changeset/ports/539413 Log: - Unbreak and upgrade to 9.1 - Take maintainership. PR: 247298 Submitted by: /me Approved by: stephen (previous maintainer) Differential Revision: D24195 Added: head/math/sage/files/brial_spkg-configure.m4 (contents, props changed) head/math/sage/files/ecl_spkg-configure.m4 (contents, props changed) head/math/sage/files/gap_spkg-configure.m4 (contents, props changed) head/math/sage/files/gc_spkg-configure.m4 (contents, props changed) head/math/sage/files/giac_spkg-configure.m4 (contents, props changed) head/math/sage/files/jmol_spkg-configure.m4.in (contents, props changed) head/math/sage/files/libhomfly_spkg-configure.m4 (contents, props changed) head/math/sage/files/linbox_spkg-configure.m4 (contents, props changed) head/math/sage/files/mathjax_spkg-configure.m4.in (contents, props changed) head/math/sage/files/maxima_spkg-configure.m4 (contents, props changed) head/math/sage/files/palp_spkg-configure.m4 (contents, props changed) head/math/sage/files/patch-bootstrap (contents, props changed) head/math/sage/files/patch-build_bin_sage-apply-patches (contents, props changed) head/math/sage/files/patch-build_bin_sage-build-env-config.in (contents, props changed) head/math/sage/files/patch-build_make_install (contents, props changed) head/math/sage/files/patch-build_pkgs_cddlib_spkg-configure.m4 (contents, props changed) head/math/sage/files/patch-build_pkgs_gsl_spkg-configure.m4 (contents, props changed) head/math/sage/files/patch-build_pkgs_tachyon_patches_Make-arch.patch (contents, props changed) head/math/sage/files/patch-configure.ac (contents, props changed) head/math/sage/files/patch-src_sage_libs_ecl.pyx (contents, props changed) head/math/sage/files/patch-src_sage_libs_eclsig.h (contents, props changed) head/math/sage/files/psutil__arch__bsd__freebsd_socks.c.patch (contents, props changed) head/math/sage/files/py_libs_spkg-configure.m4 (contents, props changed) head/math/sage/files/pynac_spkg-configure.m4 (contents, props changed) head/math/sage/files/rubiks_spkg-configure.m4 (contents, props changed) head/math/sage/files/sage_brial_spkg-configure.m4.in (contents, props changed) head/math/sage/files/singular_spkg-configure.m4 (contents, props changed) head/math/sage/files/suitesparse_spkg-configure.m4 (contents, props changed) head/math/sage/files/sympow_spkg-configure.m4 (contents, props changed) head/math/sage/files/threejs_spkg-configure.m4.in (contents, props changed) head/math/sage/files/zn_poly_spkg-configure.m4 (contents, props changed) head/math/sage/pkg-plist (contents, props changed) Deleted: head/math/sage/files/gcc.in head/math/sage/files/ld.in head/math/sage/files/optional-packages.txt head/math/sage/files/patch-build_pkgs_eclib_spkg-install head/math/sage/files/patch-build_pkgs_git_spkg-install head/math/sage/files/patch-build_pkgs_iml_spkg-install head/math/sage/files/patch-build_pkgs_libgap_spkg-install head/math/sage/files/patch-build_pkgs_m4rie_spkg-install head/math/sage/files/patch-build_pkgs_maxima_fbsd-patch-src_interfaces_xmaxima_Makefile.in head/math/sage/files/patch-build_pkgs_maxima_spkg-install head/math/sage/files/patch-build_pkgs_ncurses_fbsd-patch-src_configure head/math/sage/files/patch-build_pkgs_numpy_fbsd-patch-src_numpy_distutils_system_info.py head/math/sage/files/patch-build_pkgs_ppl_fbsd-patch-src_demos_ppl_lpsol_ppl_lpsol.c head/math/sage/files/patch-build_pkgs_ppl_spkg-install head/math/sage/files/patch-build_pkgs_pynac_spkg-install head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Doc-library-fcntl.rst head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Lib__distutils__unixccompiler.py head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Lib_distutils_command_build_scripts.py head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Makefile.pre.in head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Modules-_ctypes-libffi-configure head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Modules-fcntlmodule.c head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_Modules___ctypes__libffi__src__arm__ffi.c head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_issue21166 head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_pr192365 head/math/sage/files/patch-build_pkgs_python_fbsd-patch-src_setup.py head/math/sage/files/patch-build_pkgs_scons_fbsd-patch-src_engine_SCons_compat__scons_subprocess.py head/math/sage/files/patch-build_pkgs_sympow_fbsd-patch-src_disk.c head/math/sage/files/patch-build_pkgs_zlib_spkg-install head/math/sage/files/patch-src_bin_sage-spkg head/math/sage/files/patch-src_doc_common_builder.py head/math/sage/files/patch-src_doc_common_custom-sphinx-build.py Modified: head/math/sage/Makefile head/math/sage/distinfo Modified: head/math/sage/Makefile ============================================================================== --- head/math/sage/Makefile Wed Jun 17 09:35:01 2020 (r539412) +++ head/math/sage/Makefile Wed Jun 17 10:05:10 2020 (r539413) @@ -2,135 +2,521 @@ # $FreeBSD$ PORTNAME= sage -PORTVERSION= 6.7 -PORTREVISION= 8 +PORTVERSION= 9.1 CATEGORIES= math -MASTER_SITES= http://boxen.math.washington.edu/home/sagemath/sage-mirror/src/ \ - http://mirrors.xmission.com/sage/src/ \ - http://www-ftp.lip6.fr/pub/math/sagemath/src/ \ - http://mirrors.mit.edu/sage/src/ \ - http://www.sagemath.org/src-old/ +MASTER_SITES= https://mirrors.xmission.com/sage/src/ \ + http://mirrors.xmission.com/sage/src/ \ + https://www-ftp.lip6.fr/pub/math/sagemath/src/ \ + https://mirrors.mit.edu/sage/src/ \ + https://files.sagemath.org/src/ \ + ftp://www-ftp.lip6.fr/pub/math/sagemath/src/ PKGNAMESUFFIX= -math -MAINTAINER= stephen@FreeBSD.org +MAINTAINER= thierry@FreeBSD.org COMMENT= Open source Mathematics software -BROKEN= unfetchable -DEPRECATED= Broken for more than 6 months -EXPIRATION_DATE= 2020-06-05 - LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING.txt -BUILD_DEPENDS= bash:shells/bash \ - convert:graphics/ImageMagick6 \ - ffmpeg:multimedia/ffmpeg \ - automake:devel/automake \ - autoconf:devel/autoconf -LIB_DEPENDS= libatlas.so:math/atlas \ - liblapack.so:math/lapack -RUN_DEPENDS= bash:shells/bash +BUILD_DEPENDS= bash:shells/bash \ + dash:shells/dash \ + cmake:devel/cmake \ + dreadnaut:math/nauty \ + ${PYTHON_PKGNAMEPREFIX}alabaster>0:textproc/py-alabaster@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}Babel>0:devel/py-babel@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}bleach>0:www/py-bleach@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}brial>0:math/py-brial@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}certifi>0:security/py-certifi@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}configparser>0:devel/py-configparser@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cvxopt>0:math/py-cvxopt@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cycler>0:devel/py-cycler@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cypari2>0:math/py-cypari2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cysignals>0:devel/py-cysignals@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cython>0:lang/cython@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}dateutil>0:devel/py-dateutil@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}decorator>0:devel/py-decorator@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}defusedxml>0:devel/py-defusedxml@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}docutils>0:textproc/py-docutils@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}entrypoints>0:devel/py-entrypoints@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}fpylll>0:math/py-fpylll@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}future>0:devel/py-future@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}gmpy2-devel>0:math/py-gmpy2-devel@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}html5lib>0:www/py-html5lib@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}imagesize>0:graphics/py-imagesize@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}ipython5>0:devel/ipython5@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}ipython_genutils>0:devel/py-ipython_genutils@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}itsdangerous>0:security/py-itsdangerous@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}Jinja2>0i:devel/py-Jinja2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}jsonschema>0:devel/py-jsonschema@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}jupyter_core>0:devel/py-jupyter_core@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}jupyter_client>0:devel/py-jupyter_client@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}kiwisolver>0:math/py-kiwisolver@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}MarkupSafe>0:textproc/py-MarkupSafe@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}mistune>0:textproc/py-mistune@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}mpmath>0:math/py-mpmath@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}nbconvert>0:devel/py-nbconvert@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}nbformat>0:devel/py-nbformat@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}networkx>0:math/py-networkx@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}nose>0:devel/py-nose@${PY_FLAVOR}\ + ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}packaging>0:devel/py-packaging@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pandocfilters>0:textproc/py-pandocfilters@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pathlib2>0:devel/py-pathlib2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pexpect>0:misc/py-pexpect@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pickleshare>0:databases/py-pickleshare@${PY_FLAVOR}\ + ${PY_PILLOW} \ + ${PYTHON_PKGNAMEPREFIX}pkgconfig>0:devel/py-pkgconfig@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pplpy>0:math/py-pplpy@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}prometheus-client>0:net-mgmt/py-prometheus-client@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}prompt_toolkit1>0:devel/py-prompt_toolkit1@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}psutil>0:sysutils/py-psutil@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}ptyprocess>0:sysutils/py-ptyprocess@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pyparsing>0:devel/py-pyparsing@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pytz>0:devel/py-pytz@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pyzmq>0:net/py-pyzmq@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}sqlite3>0:databases/py-sqlite3@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}rpy2>0:math/py-rpy2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}scandir>0:sysutils/py-scandir@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}send2trash>0:deskutils/py-send2trash@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}simplegeneric>0:devel/py-simplegeneric@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}snowballstemmer>0:textproc/py-snowballstemmer@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}sympy>0:math/py-sympy@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}terminado>0:net/py-terminado@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}testpath>0:devel/py-testpath@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}traitlets>0:devel/py-traitlets@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}tornado>0:www/py-tornado@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}traitlets>0:devel/py-traitlets@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}twisted>0:devel/py-twisted@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}vcversioner>0:devel/py-vcversioner@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}wcwidth>0:devel/py-wcwidth@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}webencodings>0:converters/py-webencodings@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}werkzeug>0:www/py-werkzeug@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}zope.interface>0:devel/py-zope.interface@${PY_FLAVOR}\ + fflas-ffpack-config:math/fflas-ffpack \ + gfan:math/gfan \ + git:devel/git \ + gp2c:math/gp2c \ + jmol:science/jmol \ + libatomic_ops>0:devel/libatomic_ops \ + MathJax>0:www/mathjax \ + maxima>0:math/maxima \ + p5-XML-Writer>0:textproc/p5-XML-Writer \ + p5-XML-LibXML>0:textproc/p5-XML-LibXML \ + p5-XML-LibXSLT>0:textproc/p5-XML-LibXSLT\ + p5-File-Slurp>0:devel/p5-File-Slurp \ + p5-JSON>0:converters/p5-JSON \ + p5-SVG>0:textproc/p5-SVG \ + p5-MongoDB>0:databases/p5-MongoDB \ + p5-Term-ReadLine-Gnu>0:devel/p5-Term-ReadLine-Gnu\ + palp>0:math/palp \ + pandoc:textproc/hs-pandoc \ + pari-elldata>0:math/pari_elldata\ + pari-galdata>0:math/pari_galdata\ + pari-galpol>0:math/pari_galpol \ + pari-nftables>0:math/pari_nftables \ + pari-seadata>0:math/pari_seadata\ + QuadraticSieve:math/flintqs \ + ninja:devel/ninja \ + gpatch:devel/patch \ + rubiks>0:math/rubiks \ + sympow:math/sympow \ + tachyon:graphics/tachyon \ + three.js>0:www/threejs \ + yasm:devel/yasm \ + gtar:archivers/gtar \ + convert:graphics/ImageMagick6 \ + ffmpeg:multimedia/ffmpeg \ + ${LOCALBASE}/lib/libBLT.a:x11-toolkits/blt +LIB_DEPENDS= libarb.so:math/arb \ + libboost_thread.so:devel/boost-libs \ + libbraiding.so:math/libbraiding \ + libbrial.so:math/brial \ + libCbc.so:math/cbc \ + libcdd.so:math/cddlib \ + libcliquer.so:math/cliquer \ + libcurl.so:ftp/curl \ + libec.so:math/eclib \ + libecl.so:lang/ecl \ + libecm.so:math/gmp-ecm \ + libflint.so:math/flint2 \ + libfplll.so:math/fplll \ + libfreetype.so:print/freetype2 \ + libgc.so:devel/boehm-gc \ + libgc-threaded.so:devel/boehm-gc-threaded\ + libgf2x.so:math/gf2x \ + libgivaro.so:math/givaro \ + libglpk.so:math/glpk \ + libgap.so:math/gap \ + libgmp.so:math/gmp \ + libgsl.so:math/gsl \ + libhomfly.so:math/libhomfly \ + libiml.so:math/iml \ + libisl.so:devel/isl \ + libLfunction.so:math/lcalc \ + libffi.so:devel/libffi \ + libgd.so:graphics/gd \ + libgiac.so:math/giacxcas \ + liblinbox.so:math/linbox \ + liblrcalc.so:math/lrcalc \ + liblrsgmp.so:math/lrslib \ + libm4ri.so:math/m4ri \ + libm4rie.so:math/m4rie \ + libmpc.so:math/mpc \ + libmpfi.so:math/mpfi \ + libmpfr.so:math/mpfr \ + libmpir.so:math/mpir \ + libntl.so:math/ntl \ + libpari.so:math/pari \ + libpcre.so:devel/pcre \ + libplanarity.so:math/planarity \ + libpng.so:graphics/png \ + libppl.so:devel/ppl \ + libpynac.so:math/pynac \ + libR.so:math/R \ + librw.so:math/rankwidth \ + libSingular.so:math/singular \ + libamd.so:math/suitesparse \ + libsemigroups.so:math/libsemigroups \ + libsymmetrica.so:math/symmetrica\ + libzmq.so:net/libzmq4 \ + libzn_poly-0.9.so:math/zn_poly \ + libqd.so:math/qd \ + libisl.so:devel/isl \ + libblas.so:math/blas \ + libicuuc.so:devel/icu \ + libtiff.so:graphics/tiff \ + liblapack.so:math/lapack \ + libedit.so:devel/libedit \ + libwebp.so:graphics/webp \ + libpcre2-8.so:devel/pcre2 \ + libgdbm.so:databases/gdbm \ + liblcms2.so:graphics/lcms2 \ + libopenjp2.so:graphics/openjpeg +RUN_DEPENDS= bash:shells/bash \ + dreadnaut:math/nauty \ + ${PYTHON_PKGNAMEPREFIX}alabaster>0:textproc/py-alabaster@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}Babel>0:devel/py-babel@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}bleach>0:www/py-bleach@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}brial>0:math/py-brial@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}certifi>0:security/py-certifi@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}configparser>0:devel/py-configparser@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cvxopt>0:math/py-cvxopt@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cycler>0:devel/py-cycler@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cypari2>0:math/py-cypari2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cysignals>0:devel/py-cysignals@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}cython>0:lang/cython@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}dateutil>0:devel/py-dateutil@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}decorator>0:devel/py-decorator@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}defusedxml>0:devel/py-defusedxml@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}docutils>0:textproc/py-docutils@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}entrypoints>0:devel/py-entrypoints@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}fpylll>0:math/py-fpylll@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}future>0:devel/py-future@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}gmpy2-devel>0:math/py-gmpy2-devel@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}html5lib>0:www/py-html5lib@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}imagesize>0:graphics/py-imagesize@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}ipython5>0:devel/ipython5@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}ipython_genutils>0:devel/py-ipython_genutils@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}itsdangerous>0:security/py-itsdangerous@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}Jinja2>0:devel/py-Jinja2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}jsonschema>0:devel/py-jsonschema@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}jupyter_core>0:devel/py-jupyter_core@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}jupyter_client>0:devel/py-jupyter_client@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}kiwisolver>0:math/py-kiwisolver@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}MarkupSafe>0:textproc/py-MarkupSafe@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}mistune>0:textproc/py-mistune@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}mpmath>0:math/py-mpmath@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}nbconvert>0:devel/py-nbconvert@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}nbformat>0:devel/py-nbformat@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}networkx>0:math/py-networkx@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}nose>0:devel/py-nose@${PY_FLAVOR}\ + ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}packaging>0:devel/py-packaging@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pandocfilters>0:textproc/py-pandocfilters@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pathlib2>0:devel/py-pathlib2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pexpect>0:misc/py-pexpect@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pickleshare>0:databases/py-pickleshare@${PY_FLAVOR}\ + ${PY_PILLOW} \ + ${PYTHON_PKGNAMEPREFIX}pkgconfig>0:devel/py-pkgconfig@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pplpy>0:math/py-pplpy@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}prometheus-client>0:net-mgmt/py-prometheus-client@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}prompt_toolkit1>0:devel/py-prompt_toolkit1@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}psutil>0:sysutils/py-psutil@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}ptyprocess>0:sysutils/py-ptyprocess@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pyparsing>0:devel/py-pyparsing@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pytz>0:devel/py-pytz@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}pyzmq>0:net/py-pyzmq@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}sqlite3>0:databases/py-sqlite3@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}rpy2>0:math/py-rpy2@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}scandir>0:sysutils/py-scandir@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}send2trash>0:deskutils/py-send2trash@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}simplegeneric>0:devel/py-simplegeneric@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}snowballstemmer>0:textproc/py-snowballstemmer@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}sympy>0:math/py-sympy@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}terminado>0:net/py-terminado@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}testpath>0:devel/py-testpath@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}tornado>0:www/py-tornado@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}traitlets>0:devel/py-traitlets@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}twisted>0:devel/py-twisted@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}vcversioner>0:devel/py-vcversioner@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}wcwidth>0:devel/py-wcwidth@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}webencodings>0:converters/py-webencodings@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}werkzeug>0:www/py-werkzeug@${PY_FLAVOR}\ + ${PYTHON_PKGNAMEPREFIX}zope.interface>0:devel/py-zope.interface@${PY_FLAVOR}\ + fflas-ffpack-config:math/fflas-ffpack \ + gfan:math/gfan \ + git:devel/git \ + gp2c:math/gp2c \ + jmol:science/jmol \ + MathJax>0:www/mathjax \ + maxima>0:math/maxima \ + p5-Term-ReadLine-Gnu>0:devel/p5-Term-ReadLine-Gnu\ + palp>0:math/palp \ + pandoc:textproc/hs-pandoc \ + pari-elldata>0:math/pari_elldata\ + pari-galdata>0:math/pari_galdata\ + pari-galpol>0:math/pari_galpol \ + pari-nftables>0:math/pari_nftables \ + pari-seadata>0:math/pari_seadata\ + QuadraticSieve:math/flintqs \ + rubiks>0:math/rubiks \ + sympow:math/sympow \ + tachyon:graphics/tachyon \ + three.js>0:www/threejs \ + yasm:devel/yasm \ + pixz:archivers/pixz -pre-extract: - @${ECHO_MSG} - @${ECHO_MSG} Instead of installing the port, which will take a considerable amount of - @${ECHO_MSG} extra time and space, you can instead type \"make build\". Then you can move - @${ECHO_MSG} work/${PORTNAME}-${PORTVERSION} to wherever you like, and run sage from there. - @${ECHO_MSG} However, there is no guarantee that this alternative will always work. -. if !(defined(PACKAGE_BUILDING) || defined(BATCH)) - @sleep 10 -. endif +USES= autoreconf blaslapack:openblas compiler:c++11-lib fortran \ + gettext gmake gnome iconv jpeg libtool localbase ncurses perl5 \ + pkgconfig python:3.6+ readline shebangfix sqlite tk xorg +USE_TEX= latex:build pdftex:build tex:build +USE_XORG= x11 xext xscrnsaver +USE_GNOME= cairo glib20 pango +USE_PYTHON= cython +USE_JAVA= yes # for science/jmol -PLIST_FILES= bin/sage -USE_TEX= latex:build -USES= gmake iconv jpeg tk perl5 +CONFLICTS= python-3.* \ + ${PYTHON_PKGNAMEPREFIX}ipykernel5-5.* \ + ${PYTHON_PKGNAMEPREFIX}ipython-7.* \ + ${PYTHON_PKGNAMEPREFIX}ipywidgets-7.* \ + ${PYTHON_PKGNAMEPREFIX}notebook-6.* \ + ${PYTHON_PKGNAMEPREFIX}prompt_toolkit-2.* \ + ${PYTHON_PKGNAMEPREFIX}widgetsnbextension-3.5.* -# Optimization flags will be defined by the source -CFLAGS:= ${CFLAGS:C/^-O.*$//} -FFLAGS:= ${CFLAGS:C/^-O.*$//} +SHEBANG_FILES= . +SHEBANG_LANG+= dash +dash_OLD_CMD= /bin/dash +dash_CMD= ${LOCALBASE}/bin/dash -MAKE_ENV+= SAGE_PORT=yes \ - SAGE_ATLAS_LIB=${LOCALBASE}/lib \ - DOT_SAGE=${WRKSRC}/tmp/.sage \ - SAGE_FAT_BINARY=yes \ - PERL=${PERL} +DISABLE_BINUTILS= yes -# The following is needed for the lapack subpackage. -MAKE_ARGS+= ARCH="${AR}" +LIBS= -lomp -pthread +.if !defined{WITH_DEBUG} +LDFLAGS+= -s +.endif +BLDDIR= ${WRKDIR}/build +GNU_CONFIGURE= yes +CONFIGURE_ENV= SAGE_PORT=yes CC=${CC} GCC=${CC} CXX=${CXX} AS=${AS} LD=${LD} \ + SAGE_LOCAL=${PREFIX} SAGE_DESTDIR=${BLDDIR}/ \ + DESTDIR=${BLDDIR}/${PREFIX} PATCH=${LOCALBASE}/bin/gpatch +CONFIGURE_ARGS= --with-system-gcc=force \ + --with-system-python3=yes \ + --localstatedir=/var +MAKE_ENV= MAKE=${GMAKE} DESTDIR=${BLDDIR} +REINPLACE_ARGS= -i '' +BINARY_ALIAS= patch=${LOCALBASE}/bin/gpatch +PLIST_SUB= VER=${PORTVERSION} -post-patch: -# Create wrapper for invocation of make. - @${MKDIR} ${WRKSRC}/local/bin - @${LN} -s -f ${LOCALBASE}/bin/gmake ${WRKSRC}/local/bin/make +OPTIONS_DEFINE= DOCS +PORTDOCS= * -# Create wrapper for invocation of ld. - @${SED} -e 's#%%LD%%#${LOCALBASE}/bin/ld#' \ - ${FILESDIR}/ld.in > ${WRKSRC}/local/bin/ld - @${CHMOD} +x ${WRKSRC}/local/bin/ld +.if defined(PACKAGE_BUILDING) +CONFIGURE_ARGS+=--enable-build-as-root +.endif -post-build: - ${RM} -r ${WRKSRC}/tmp/.sage - ${CHMOD} -R a+rX ${WRKSRC} +.include <bsd.port.pre.mk> -check regression-test test: build - @${ECHO_MSG} This test can also be performed after installation by typing \"sage -testall\". - @${ECHO_MSG} - cd ${WRKSRC} && ${SETENV} DOT_SAGE=${WRKSRC}/tmp/.sage ./sage -testall - ${RM} ${WRKSRC}/python*.core +WSDIR= ${BLDDIR}${PREFIX} +SPKG_INST= configure.ac configure build/sage_bootstrap/uninstall.py \ + build/make/install src/bin/sage-env +PY2FIX= bin lib/${PYTHON_VERSION} +DOC2FIX= .pickle .doctree +SE2FIX= ^ECLDIR= ^SINGULAR MAXIMA_PREFIX +SHR2FIX= GAP_ROOT_DIR PPLPY_DOCS SINGULARPATH +STG2FIX= bin/sage-env-config default.qepcadrc \ + share/jupyter/kernels/sagemath/kernel.json +BADLN= kernels/sagemath/doc nbextensions/jsmol \ + nbextensions/mathjax nbextensions/threejs +# External dependencies not yet handled by SageMath +PY_LIBS= alabaster babel bleach certifi configparser cvxopt cycler \ + cypari cysignals cython dateutil decorator defusedxml docutils \ + entrypoints fpylll future gmpy2 html5lib imagesize ipython \ + ipython_genutils itsdangerous jinja2 jsonschema jupyter_client \ + jupyter_core kiwisolver markupsafe matplotlib mistune mpmath \ + nbconvert nbformat networkx nose numpy packaging pandocfilters \ + pathlib2 pexpect pickleshare pillow pkgconfig pplpy \ + prometheus_client prompt_toolkit psutil ptyprocess pyparsing \ + pytz pyzmq requests rpy2 scandir scipy send2trash simplegeneric \ + six snowballstemmer sympy terminado testpath tornado traitlets \ + twisted vcversioner wcwidth webencodings werkzeug zope_interface +PY_FILES= sage_brial +JS_LIBS= jmol mathjax threejs +SPKGCM4= brial ecl gap gc giac libhomfly linbox maxima palp pynac rubiks \ + singular suitesparse sympow zn_poly -# Don't build docs (because of mysterious race conditions). -ALL_TARGET= build +post-patch: + ${CP} ${FILESDIR}/psutil__arch__bsd__freebsd_socks.c.patch \ + ${WRKSRC}/build/pkgs/psutil/patches/ +.for sp in ${SPKGCM4} + ${CP} ${FILESDIR}/${sp}_spkg-configure.m4 \ + ${WRKSRC}/build/pkgs/${sp}/spkg-configure.m4 +.endfor +.for sp in ${PY_LIBS} + ${CP} ${FILESDIR}/py_libs_spkg-configure.m4 \ + ${WRKSRC}/build/pkgs/${sp:C/pari2/pari/}/spkg-configure.m4 +.endfor +.for sp in ${PY_FILES} + ${SED} -e 's|%%PYTHON_SITELIBDIR%%|${PYTHON_SITELIBDIR}|' ${FILESDIR}/${sp}_spkg-configure.m4.in \ + > ${WRKSRC}/build/pkgs/${sp}/spkg-configure.m4 +.endfor +.for sp in ${JS_LIBS} + ${SED} -e 's|%%LOCALBASE%%|${LOCALBASE}|' ${FILESDIR}/${sp}_spkg-configure.m4.in \ + > ${WRKSRC}/build/pkgs/${sp}/spkg-configure.m4 +.endfor -INSTALL_SAGE_DIR= ${PREFIX}/${PORTNAME}-${PORTVERSION} -STAGED_SAGE_DIR= ${STAGEDIR}${INSTALL_SAGE_DIR} -do-install: - cd ${WRKDIR} && ${FIND} -s ${WRKSRC} | \ - ${GREP} -v '^${WRKSRC}/upstream/' | \ - ${GREP} -v '^${WRKSRC}/tmp' | \ - ${SED} -e 's#${WRKDIR}/##' | \ - ${CPIO} -pmud -R ${BINOWN}:${BINGRP} ${STAGEDIR}${PREFIX} - ${ECHO_CMD} | ${SETENV} DOT_SAGE=${STAGED_SAGE_DIR}/tmp/.sage ${STAGED_SAGE_DIR}/sage - ${RM} -r ${STAGED_SAGE_DIR}/tmp/.sage - ${SED} -e "s+#SAGE_ROOT.*+SAGE_ROOT=${INSTALL_SAGE_DIR}+" ${WRKSRC}/sage > ${STAGEDIR}${PREFIX}/bin/sage - ${CHMOD} ${BINMODE} ${STAGEDIR}${PREFIX}/bin/sage +pre-configure: + ${REINPLACE_CMD} -e 's|SAGE_LOCAL="$$prefix"|SAGE_LOCAL="${WSDIR}"|' \ + -e 's|lib/pkgconfig|libdata/pkgconfig|' ${WRKSRC}/configure.ac + ${REINPLACE_CMD} -e 's|SAGE_LOCAL="@prefix@"|SAGE_LOCAL="${WSDIR}"|' \ + ${WRKSRC}/src/bin/sage-env-config.in + ${REINPLACE_CMD} -e 's|%%CFLAGS%%|${CFLAGS}|;s|%%LDFLAGS%%|${LDFLAGS}|' \ + ${WRKSRC}/build/pkgs/tachyon/patches/Make-arch.patch + ${REINPLACE_CMD} -e '/SUITESPARSE_INC_DIR/s|$${SAGE_LOCAL}/include|${LOCALBASE}/include/suitesparse|'\ + ${WRKSRC}/build/pkgs/cvxopt/spkg-install.in +.for f in ${PY_LIBS} + ${REINPLACE_CMD} -e 's|python3|${PYTHON_CMD}|;s|py_libs|${f}|' \ + ${WRKSRC}/build/pkgs/${f}/spkg-configure.m4 +.endfor + ${REINPLACE_CMD} -e 's|import cypari|import cypari2|' \ + ${WRKSRC}/build/pkgs/cypari/spkg-configure.m4 + ${REINPLACE_CMD} -e 's|import ipython|import IPython|' \ + ${WRKSRC}/build/pkgs/ipython/spkg-configure.m4 + ${REINPLACE_CMD} -e 's|import pillow|import PIL|' \ + ${WRKSRC}/build/pkgs/pillow/spkg-configure.m4 + ${REINPLACE_CMD} -e 's|import pplpy|import ppl|' \ + ${WRKSRC}/build/pkgs/pplpy/spkg-configure.m4 + ${REINPLACE_CMD} -e 's|import pyzmq|import zmq|' \ + ${WRKSRC}/build/pkgs/pyzmq/spkg-configure.m4 + ${REINPLACE_CMD} -e 's|import zope_interface|import zope.interface|' \ + ${WRKSRC}/build/pkgs/zope_interface/spkg-configure.m4 + ${REINPLACE_CMD} -e '/GAP_ROOT=/s|$$SAGE_LOCAL|${LOCALBASE}|' \ + ${WRKSRC}/build/pkgs/gap_packages/spkg-install.in + ${REINPLACE_CMD} -e "/os.path.join/s|SAGE_LOCAL|'${LOCALBASE}'|"\ + ${WRKSRC}/src/sage/libs/gap/util.pyx + ${REINPLACE_CMD} -e "/os.path.join(SAGE_LOCAL/s|SAGE_LOCAL|'${LOCALBASE}'|" \ + ${WRKSRC}/src/sage/env.py + ${REINPLACE_CMD} -e "/^library_dirs/s|SAGE_LOCAL|'${LOCALBASE}'|" \ + ${WRKSRC}/src/setup.py +.for f in ${SHR2FIX} + ${REINPLACE_CMD} -e "/${f}/s|SAGE_SHARE|'${LOCALBASE}/share/'|" \ + ${WRKSRC}/src/sage/env.py +.endfor + ${REINPLACE_CMD} -e "/JMOL_DIR/s|SAGE_SHARE|'${JAVASHAREDIR}'|" \ + -e "/JMOL_DIR/s|jmol|classes|" \ + ${WRKSRC}/src/sage/env.py + ${REINPLACE_CMD} -e "/JSMOL_DIR/s|SAGE_SHARE|'${LOCALBASE}/www'|" \ + -e "/JSMOL_DIR/s|jsmol|JSmol|" \ + ${WRKSRC}/src/sage/env.py + ${REINPLACE_CMD} -e "/MATHJAX_DIR/s|SAGE_SHARE|'${LOCALBASE}/www'|" \ + -e "/MATHJAX_DIR/s|mathjax|MathJax|" \ + ${WRKSRC}/src/sage/env.py + ${REINPLACE_CMD} -e "/THREEJS_DIR/s|SAGE_SHARE|'${LOCALBASE}/www'|" \ + ${WRKSRC}/src/sage/env.py +.for f in ${SE2FIX} + ${REINPLACE_CMD} -e '/${f}/s|$$SAGE_LOCAL|${LOCALBASE}|' \ + ${WRKSRC}/src/bin/sage-env +.endfor + ${REINPLACE_CMD} -e '/LDFLAGS=/s|-rpath,$$SAGE_LOCAL|-rpath,${LOCALBASE}|' \ + ${WRKSRC}/src/bin/sage-env +.for f in ${SPKG_INST} + ${REINPLACE_CMD} -e 's|/var/lib/sage|/share/libdata/${PORTNAME}|' \ + ${WRKSRC}/${f} +.endfor + (cd ${WRKSRC} && ./bootstrap) + ${MKDIR} ${BLDDIR}${PREFIX}/lib/pkgconfig # Removed thereafter -post-install: - @${FIND} -s ${STAGED_SAGE_DIR} -not -type d | \ - ${SED} -e 's#${STAGEDIR}${PREFIX}/##' >> ${TMPPLIST} - @${FIND} -s ${STAGED_SAGE_DIR} -type d -empty | \ - ${SED} -e 's#${STAGEDIR}${PREFIX}/#@dir #' >> ${TMPPLIST} +post-build: +.for d in ${PY2FIX} + ${FIND} ${WSDIR}/${d} -type f -exec ${GREP} -I -l "${WSDIR}/bin/python" {} \; |\ + ${XARGS} ${SED} -i "" -e 's|${WSDIR}/bin/pytho.*|${PYTHON_CMD}|' +.endfor +.for d in ${PY2FIX} + ${FIND} ${WSDIR}/${d} -type f -exec ${GREP} -I -l "/usr/bin/env python" {} \; |\ + ${XARGS} ${SED} -i "" -e 's|/usr/bin/env pytho.*|${PYTHON_CMD}|' +.endfor + ${FIND} ${BLDDIR}/${PYTHON_LIBDIR} -type d -name __pycache__ | \ + ${XARGS} ${RM} -r +.for f in ${DOC2FIX} + ${FIND} ${BLDDIR}${DOCSDIR} -type f -name "*${f}" | ${XARGS} \ + ${SED} -i "" -e 's|${BLDDIR}||g' +.endfor +.for f in ${STG2FIX} + ${SED} -i "" -e 's|${BLDDIR}||g' ${BLDDIR}${PREFIX}/${f} +.endfor + ${RM} ${BLDDIR}${PYTHON_CMD} ${BADLN:C|^|${BLDDIR}${PREFIX}/share/jupyter/|} + ${RM} -r ${BLDDIR}${PREFIX}/var + ${RM} ${BLDDIR}${PREFIX}/lib64 ${BLDDIR}${PREFIX}/libdata/pkgconfig/blas.pc \ + ${BLDDIR}${PREFIX}/libdata/pkgconfig/cblas.pc \ + ${BLDDIR}${PREFIX}/libdata/pkgconfig/gsl.pc \ + ${BLDDIR}${PREFIX}/libdata/pkgconfig/lapack.pc + # Cannot use a package system for pip and setuptools + ${RM} ${BLDDIR}${PREFIX}/bin/easy_install* ${BLDDIR}${PREFIX}/bin/pip* + ${RM} -r ${BLDDIR}${PYTHON_SITELIBDIR}/pip-* ${BLDDIR}${PYTHON_SITELIBDIR}/pip/ + ${RM} -r ${BLDDIR}${PYTHON_SITELIBDIR}/setuptools* \ + ${BLDDIR}${PYTHON_SITELIBDIR}/easy_install.py \ + ${BLDDIR}${PYTHON_SITELIBDIR}/pkg_resources \ + ${BLDDIR}${PYTHON_SITELIBDIR}/__pycache__/easy_install* + # Remoce CONFLICTS with py3x-backports-1 + ${RM} ${BLDDIR}${PYTHON_SITELIBDIR}/backports/__init__.py \ + ${BLDDIR}${PYTHON_SITELIBDIR}/backports/__init__.cpython-${PYTHON_SUFFIX}.pyc + # Wont use a system package for sphinx because it would need py-sphinx18 + its dependencies + # Check https://trac.sagemath.org/ticket/28856 + ${RM} ${BLDDIR}${PREFIX}/bin/sphinx-* + ${RM} -r ${BLDDIR}${PYTHON_SITELIBDIR}/sphinx + ${RM} -r ${BLDDIR}${PYTHON_SITELIBDIR}/sphinxcontrib \ + ${BLDDIR}${PYTHON_SITELIBDIR}/Sphinx-* \ + ${BLDDIR}${PYTHON_SITELIBDIR}/sphinxcontrib_websupport-* + ${RM} -r ${BLDDIR}${PREFIX}/bin/pygmentize \ + ${BLDDIR}${PYTHON_SITELIBDIR}/Pygments-* \ + ${BLDDIR}${PYTHON_SITELIBDIR}/pygments + # ${TRUE} because compilation of some .py fails: compileall.py -q to see errors + (cd ${WSDIR} && (${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py \ + -d ${PYTHONPREFIX_SITELIBDIR} -f ${PYTHONPREFIX_SITELIBDIR:S;${PREFIX}/;;} || \ + ${TRUE})) + ${FIND} ${BLDDIR}${PREFIX} -name "*.bak" -delete -.include <bsd.port.pre.mk> - -MAKE_ENV+= MAKE="${MAKE} -j${MAKE_JOBS_NUMBER}" - -.ifdef MAINTAINER_MODE -test-fbsd-patches: patch - ${RM} -r ${WRKSRC}/build/pkgs/*/src; \ - for d in ${WRKSRC}/build/pkgs/*; do \ - if ls $$d/fbsd-patch-* > /dev/null 2>&1; then \ - ${ECHO_MSG} Testing patches in $${d##*/}; \ - b=$${d##*/}-`${CAT} $$d/package-version.txt | ${SED} 's/\.p.*//'`; \ - c=${WRKSRC}/upstream/$$b.tar.bz2 ; \ - if [ ! -e $$c ]; then \ - c=${WRKSRC}/upstream/$$b.tar.gz ; \ - if [ ! -e $$c ]; then \ - ${ECHO_MSG} Couldn\'t find $$c; \ - exit 1; \ - fi; \ - fi; \ - b=`echo $$b | sed 's/python/Python/'` ; \ - if ! (cd $$d && tar xf $$c && ${MV} $$b src); then \ - ${ECHO_MSG} Unable to unarchive $$c; \ - exit 1; \ - fi; \ - if ! (cd $$d && ${CAT} fbsd-patch-* | patch); then \ - ${ECHO_MSG} Patches in $${d##*/} failed; \ - exit 1; \ - fi; \ - fi; \ - done; \ - ${RM} -r ${WRKSRC}/build/pkgs/*/src -.endif +do-install: + cd "${BLDDIR}" && ${FIND} . | ${CPIO} -pdum ${STAGEDIR} + # Remove bad links + ${LN} -sf ${DOCSDIR} \ + ${STAGEDIR}${PREFIX}/share/jupyter/kernels/sagemath/doc + ${LN} -sf ${LOCALBASE}/www/JSmol \ + ${STAGEDIR}${PREFIX}/share/jupyter/nbextensions/jsmol + ${LN} -sf ${LOCALBASE}/www/MathJax \ + ${STAGEDIR}${PREFIX}/share/jupyter/nbextensions/mathjax + ${LN} -sf ${LOCALBASE}/www/threejs \ + ${STAGEDIR}${PREFIX}/share/jupyter/nbextensions/threejs + ${RM} ${STAGEDIR}${PREFIX}/lib64 ${STAGEDIR}${PREFIX}/libdata/pkgconfig/blas.pc \ + ${STAGEDIR}${PREFIX}/libdata/pkgconfig/cblas.pc \ + ${STAGEDIR}${PREFIX}/libdata/pkgconfig/gsl.pc \ + ${STAGEDIR}${PREFIX}/libdata/pkgconfig/lapack.pc .include <bsd.port.post.mk> Modified: head/math/sage/distinfo ============================================================================== --- head/math/sage/distinfo Wed Jun 17 09:35:01 2020 (r539412) +++ head/math/sage/distinfo Wed Jun 17 10:05:10 2020 (r539413) @@ -1,2 +1,3 @@ -SHA256 (sage-6.7.tar.gz) = da4688cb48c221356005935c666fa3eac96c50de60f3e5b274072f0520745677 -SIZE (sage-6.7.tar.gz) = 487207063 +TIMESTAMP = 1590251415 +SHA256 (sage-9.1.tar.gz) = 1ca30cc554e99910752170214e1d30576800ec897d66c77481b4eb505afefbb3 +SIZE (sage-9.1.tar.gz) = 1125768506 Added: head/math/sage/files/brial_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/brial_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,47 @@ +SAGE_SPKG_CONFIGURE([brial], [ + SAGE_SPKG_DEPCHECK([boost m4ri], [ + # If we're using the system m4ri and boost, ensure that we can + # compile and run an executable linked against both libbrial and + # libbrial_groebner (both are used by SageMath). + AC_LANG_PUSH(C++) + SAVED_LIBS=$LIBS + LIBS="$LIBS -lbrial -lbrial_groebner" + AC_MSG_CHECKING([if we can link against brial libraries]) + AC_RUN_IFELSE([ + AC_LANG_PROGRAM([ + #include <polybori.h> + #include <polybori/groebner/groebner_alg.h> + USING_NAMESPACE_PBORI + USING_NAMESPACE_PBORIGB + + class MyConstant : public BooleConstant{ + public: void negate() { this->m_value = !this->m_value; } + }; + ],[ + BoolePolyRing r = BoolePolyRing(2, COrderEnums::dlex); + ReductionStrategy rs = ReductionStrategy(r); + rs.llReduceAll(); // uses groebner lib + if (2 != r.nVariables()) { return 1; } + if (r.constant(true) == r.constant(false)) { return 2; } + MyConstant f = MyConstant(); + f.negate(); // ensures v1.1.0+ if m_value isn't const + if (!f.isOne()) { return 3; } + return 0; + ]) + ], + [ + AC_MSG_RESULT([yes]) + sage_spkg_install_brial=no + ], + [ + AC_MSG_RESULT([no]) + sage_spkg_install_brial=yes + ]) + LIBS=$SAVED_LIBS + AC_LANG_POP + ], + [ # If we're installing sage's boost or m4ri, then we have to + # install its BRiAl, too. + sage_spkg_install_brial=yes + ]) +]) Added: head/math/sage/files/ecl_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/ecl_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,6 @@ +SAGE_SPKG_CONFIGURE([ecl], [ + AC_PATH_PROG([ECL], [ecl]) + AS_IF([test x$ECL = x], [ + AC_MSG_NOTICE([ecl not found. Installing ecl]) + sage_spkg_install_ecl=yes]) +]) Added: head/math/sage/files/gap_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/gap_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,8 @@ +SAGE_SPKG_CONFIGURE([gap], [ + SAGE_SPKG_DEPCHECK([gmp], [ + AC_CHECK_HEADER([gap/system.h], [ + AC_SEARCH_LIBS([GAP_COMM], [gap], [ + ], [sage_spkg_install_gap=yes]) + ], [sage_spkg_install_gap=yes]) + ]) +]) Added: head/math/sage/files/gc_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/gc_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,6 @@ +SAGE_SPKG_CONFIGURE([gc], [ + SAGE_SPKG_DEPCHECK([libatomic_ops], [ + dnl checking with pkg-config + PKG_CHECK_MODULES([GC], [bdw-gc-threaded >= 7.6.4], [], [sage_spkg_install_gc=yes]) + ]) +]) Added: head/math/sage/files/giac_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/giac_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,8 @@ +SAGE_SPKG_CONFIGURE([giac], [ + SAGE_SPKG_DEPCHECK([pari], [ + AC_CHECK_HEADER([giac/giac.h], [ + AC_SEARCH_LIBS([ConvertUTF16toUTF8], [giac], [ + ], [sage_spkg_install_giac=yes]) + ], [sage_spkg_install_giac=yes]) + ]) +]) Added: head/math/sage/files/jmol_spkg-configure.m4.in ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/jmol_spkg-configure.m4.in Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,10 @@ +SAGE_SPKG_CONFIGURE( + [jmol], [dnl direct testing of file existence + AC_MSG_CHECKING(JSmol installation...) + if [[ -f %%LOCALBASE%%/www/JSmol/JSmol.lite.js ]] ; then + AC_MSG_RESULT(OK) + else + AC_MSG_RESULT(KO) + sage_spkg_install_jmol=yes + fi +]) Added: head/math/sage/files/libhomfly_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/libhomfly_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,8 @@ +SAGE_SPKG_CONFIGURE([libhomfly], [ + SAGE_SPKG_DEPCHECK([gc], [ + AC_CHECK_HEADER([homfly.h], [ + AC_SEARCH_LIBS([homfly], [homfly], [ + ], [sage_spkg_install_libhomfly=yes]) + ], [sage_spkg_install_libhomfly=yes]) + ]) +]) Added: head/math/sage/files/linbox_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/linbox_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,6 @@ +SAGE_SPKG_CONFIGURE([linbox], [ + SAGE_SPKG_DEPCHECK([gmp givaro fflas-ffpack], [ + dnl checking with pkg-config + PKG_CHECK_MODULES([LINBOX], [linbox >= 1.6.3], [], [sage_spkg_install_linbox=yes]) + ]) +]) Added: head/math/sage/files/mathjax_spkg-configure.m4.in ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/mathjax_spkg-configure.m4.in Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,10 @@ +SAGE_SPKG_CONFIGURE( + [mathjax], [dnl direct testing of file existence + AC_MSG_CHECKING(MathJax installation...) + if [[ -f %%LOCALBASE%%/www/MathJax/MathJax.js ]] ; then + AC_MSG_RESULT(OK) + else + AC_MSG_RESULT(KO) + sage_spkg_install_mathjax=yes + fi +]) Added: head/math/sage/files/maxima_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/maxima_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,6 @@ +SAGE_SPKG_CONFIGURE([maxima], [ + AC_PATH_PROG([MAXIMA], [maxima]) + AS_IF([test x$MAXIMA = x], [ + AC_MSG_NOTICE([maxima not found. Installing maxima]) + sage_spkg_install_maxima=yes]) +]) Added: head/math/sage/files/palp_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/palp_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,4 @@ +SAGE_SPKG_CONFIGURE([palp], [ + AC_PATH_PROG([PALP], [poly.x]) + AS_IF([test -z "$ac_cv_path_PALP"], [sage_spkg_install_palp=yes]) +]) Added: head/math/sage/files/patch-bootstrap ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-bootstrap Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,13 @@ +--- bootstrap.orig 2020-05-08 20:11:43 UTC ++++ bootstrap +@@ -98,7 +98,9 @@ SAGE_SPKG_CONFIGURE_$(echo ${pkgname} | tr '[a-z]' '[A + echo "$spkg_configures" >> m4/sage_spkg_configures.m4 + + SAGE_ROOT="$SAGE_ROOT" src/doc/bootstrap && \ +- install_config_rpath && \ ++ install_config_rpath ++ exit ++ # Continue with FreeBSD autoreconf + aclocal -I m4 && \ + automake --add-missing --copy build/make/Makefile-auto && \ + autoconf Added: head/math/sage/files/patch-build_bin_sage-apply-patches ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-build_bin_sage-apply-patches Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,11 @@ +--- build/bin/sage-apply-patches.orig 2020-01-01 11:03:10 UTC ++++ build/bin/sage-apply-patches +@@ -67,7 +67,7 @@ if [[ -r "${patches[0]}" ]]; then + # Skip non-existing or non-readable patches + [ -r "$patch" ] || continue + echo "Applying $patch" +- patch $patch_strip $patch_args < "$patch" ++ gpatch $patch_strip $patch_args < "$patch" + if [ $? -ne 0 ]; then + echo >&2 "Error applying '$patch'" + exit 1 Added: head/math/sage/files/patch-build_bin_sage-build-env-config.in ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-build_bin_sage-build-env-config.in Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,9 @@ +--- build/bin/sage-build-env-config.in.orig 2020-04-14 07:43:36 UTC ++++ build/bin/sage-build-env-config.in +@@ -87,5 +87,6 @@ export SAGE_PARI_CFG="@SAGE_PARI_CFG@" + + export SAGE_GLPK_PREFIX="@SAGE_GLPK_PREFIX@" + export SAGE_FREETYPE_PREFIX="@SAGE_FREETYPE_PREFIX@" ++export SAGE_SUITESPARSE_PREFIX="@SAGE_SUITESPARSE_PREFIX@" + + export SAGE_CONFIGURE_FFLAS_FFPACK="@SAGE_CONFIGURE_FFLAS_FFPACK@" Added: head/math/sage/files/patch-build_make_install ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-build_make_install Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,13 @@ +--- build/make/install.orig 2020-05-08 20:50:01 UTC ++++ build/make/install +@@ -28,7 +28,9 @@ if [ -z "${SAGE_ORIG_PATH_SET}" ]; then + fi + export PATH="$SAGE_ROOT/build/bin:$SAGE_SRC/bin:$SAGE_LOCAL/bin:$PATH" + +-export PYTHONPATH="$SAGE_LOCAL" ++PYTHON_SITELIBDIR=`$PYTHON_FOR_VENV -c 'import sysconfig; print(sysconfig.get_paths()["purelib"])'` ++REL_PYTHON_SITELIBDIR=`echo $PYTHON_SITELIBDIR | sed -e "s|$PYTHONBASE||"` ++export PYTHONPATH="$SAGE_LOCAL:$SAGE_LOCAL$REL_PYTHON_SITELIBDIR:$PYTHON_SITELIBDIR" + + ############################################################################### + # Skip the rest if nothing to do (i.e., to [re]build). Added: head/math/sage/files/patch-build_pkgs_cddlib_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-build_pkgs_cddlib_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,23 @@ +--- build/pkgs/cddlib/spkg-configure.m4.orig 2020-04-27 18:08:24 UTC ++++ build/pkgs/cddlib/spkg-configure.m4 +@@ -24,13 +24,13 @@ SAGE_SPKG_CONFIGURE([cddlib], [ + dnl check, passing up a chance to detect cddlib on Fedora and Debian + dnl for now. Once all of cddlib's consumers know about the new (or + dnl both) locations, we can update this check to support them. +- AC_CHECK_HEADER([cdd.h],[],[sage_spkg_install_cddlib=yes],[ +- #include <setoper.h> +- #include <cddmp.h> ++ AC_CHECK_HEADER([cdd/cdd.h],[ ++ dnl Both lattE and gfan try to link against libcddgmp (as ++ dnl opposed to libcdd). ++ AC_SEARCH_LIBS([dd_abs],[cddgmp],[],[sage_spkg_install_cddlib=yes]) ++ ],[sage_spkg_install_cddlib=yes],[ ++ #include <cdd/setoper.h> ++ #include <cdd/cddmp.h> + ]) +- +- dnl Both lattE and gfan try to link against libcddgmp (as +- dnl opposed to libcdd). +- AC_SEARCH_LIBS([dd_abs],[cddgmp],[],[sage_spkg_install_cddlib=yes]) + ]) + ]) Added: head/math/sage/files/patch-build_pkgs_gsl_spkg-configure.m4 ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-build_pkgs_gsl_spkg-configure.m4 Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,18 @@ +--- build/pkgs/gsl/spkg-configure.m4.orig 2020-05-27 14:11:57 UTC ++++ build/pkgs/gsl/spkg-configure.m4 +@@ -2,15 +2,6 @@ SAGE_SPKG_CONFIGURE([gsl], [ + m4_pushdef([SAGE_GSL_MINVER],["2.4"]) + SAGE_SPKG_DEPCHECK([atlas openblas], [ + PKG_CHECK_MODULES([GSL], [gsl >= $SAGE_GSL_MINVER], [ +- PKG_CHECK_VAR([GSLPCDIR], [gsl], [pcfiledir], [ +- GSL_PC="$GSLPCDIR"/gsl.pc +- AC_SUBST([SAGE_SYSTEM_FACADE_PC_FILES]) +- AS_VAR_APPEND([SAGE_SYSTEM_FACADE_PC_FILES], [" \$(SAGE_PKGCONFIG)/gsl.pc"]) +- AC_SUBST([SAGE_GSL_PC_COMMAND],["\$(SED) -e 's/\$\${GSL_CBLAS_LIB}//' -e \"s/^GSL_CBLAS_LIB=.*/Requires: cblas/\" \"$GSL_PC\" > \"\$(@)\""]) +- ], [ +- AC_MSG_WARN([Unable to locate the directory of gsl.pc. This should not happen!]) +- sage_spkg_install_gsl=yes +- ]) + ], [sage_spkg_install_gsl=yes]) + ]) + m4_popdef([SAGE_GSL_MINVER]) Added: head/math/sage/files/patch-build_pkgs_tachyon_patches_Make-arch.patch ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/math/sage/files/patch-build_pkgs_tachyon_patches_Make-arch.patch Wed Jun 17 10:05:10 2020 (r539413) @@ -0,0 +1,542 @@ +--- build/pkgs/tachyon/patches/Make-arch.patch.orig 2020-01-01 11:03:10 UTC ++++ build/pkgs/tachyon/patches/Make-arch.patch +@@ -10,7 +10,15 @@ + + # MPI path setup, probably shouldn't need to be changed. + MPIINC=$(MPIDIR)/include +-@@ -23,7 +24,8 @@ default: ++@@ -16,14 +17,15 @@ ++ MISCDEFS=$(USEJPEG) $(USEPNG) $(FLT) $(MBOX) ++ MISCINC=$(JPEGINC) $(PNGINC) $(SPACEBALLINC) ++ MISCFLAGS=$(MISCDEFS) $(MISCINC) ++-MISCLIB=$(JPEGLIB) $(PNGLIB) $(SPACEBALLLIB) +++MISCLIB=%%LDFLAGS%% $(JPEGLIB) $(PNGLIB) $(SPACEBALLLIB) ++ ++ default: ++ @echo " Choose one of the architectures specified below." + @echo "--------------------------------------------------------------" + @echo " Parallel Versions " + @echo "" +@@ -20,7 +28,7 @@ + @echo " aix-64-thr - IBM AIX 5.x POSIX Threads, 64-bit " + @echo " aix-mpi - IBM AIX 5.x (SP) MPI " + @echo " asci-red-mpi - Intel ASCI Red MPI " +-@@ -32,11 +34,12 @@ default: ++@@ -32,11 +34,12 @@ + @echo " cray-t3e-mpi - Cray T3E MPI " + @echo " cray-xt3-mpi - Cray XT3 MPI " + @echo " compaq-alphasc-mpi - Lemieux at PSC MPI " +@@ -34,7 +42,7 @@ + @echo " linux-alpha-ccc-qsw - Linux Alpha, Compaq C, MPI, QSWnet " + @echo " linux-lam - Linux MPI (OSC LAM) " + @echo " linux-lam-64 - Linux AMD64/EM64T, MPI, 64-bit " +-@@ -48,13 +51,14 @@ default: ++@@ -48,13 +51,14 @@ + @echo "linux-ia64-thr-sgicc - Linux IA-64, SGI Pro64 Compilers " + @echo " macosx-thr - MacOS X PowerPC, POSIX Threads " + @echo " macosx-x86-thr - MacOS X Intel x86, POSIX Threads " +@@ -56,7 +64,7 @@ + @echo "--------------------------------------------------------------" + @echo " Hybrid Parallel Versions " + @echo "" +-@@ -63,9 +67,11 @@ default: ++@@ -63,9 +67,11 @@ + @echo "--------------------------------------------------------------" + @echo " Sequential Versions " + @echo "" +@@ -70,7 +78,7 @@ + @echo " irix6 - SGI Irix 6.x " + @echo " linux - Linux " + @echo " linux-64 - Linux, AMD64/EM64T, GCC 3.x, 64-bit " +-@@ -102,7 +108,7 @@ default: ++@@ -102,7 +108,7 @@ + @echo "Consult the README file in this directory for further info. " + + ## +@@ -79,7 +87,7 @@ + ## No pthreads on ASCI Red yet. I didn't bother with the cop() stuff + ## + asci-red-mpi: +-@@ -118,7 +124,7 @@ asci-red-mpi: ++@@ -118,7 +124,7 @@ + + ## + ## IBM Blue Gene/L Parallel Supercomputer +@@ -88,7 +96,7 @@ + ## NOTE: strip breaks bluegene executables, they are dynamically re-linked + ## at runtime, so we must use /bin/true rather than strip + ## +-@@ -137,7 +143,7 @@ bluegene-mpi: ++@@ -137,7 +143,7 @@ + ## Cray Parallel Vector Processor Machines Using Threads + ## + ## Tested on J90s, but should work on almost any of the Cray PVP systems. +@@ -97,7 +105,7 @@ + ## off running on a fast workstation, or even better, on a T3E!!! + ## + cray-thr: +-@@ -228,7 +234,7 @@ cray-xt3-mpi: ++@@ -228,7 +234,7 @@ + ## + ## Architecture flags for the Intel Paragon XP/S Supercomputer using MPI + ## for message passing. NX is no longer supported by this software. +@@ -106,7 +114,7 @@ + ## Concurrent I/O is used by default. + ## + +-@@ -264,8 +270,8 @@ paragon-mpi: ++@@ -264,8 +270,8 @@ + + + ## +@@ -117,7 +125,7 @@ + ## Tested with the mpich distribution from Argonne National Labs + ## + +-@@ -277,7 +283,7 @@ ipsc860-mpi: ++@@ -277,7 +283,7 @@ + "AR = ar860" \ + "ARFLAGS = r" \ *** DIFF OUTPUT TRUNCATED AT 1000 LINES ***
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202006171005.05HA5BX2059344>